RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 HOXA10P31260 410 aaPredicted RBP10.73□□□□□ -0.69
PCNX1-215ENST00000557428 CRAMP1Q96RY5 1269 aa10.73□□□□□ -0.69
PCNX1-215ENST00000557428 TAF1P21675 1872 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 DLG5Q8TDM6 1919 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 H7C1D1 291 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 TRPA1O75762 1119 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 NTSR2O95665 410 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
PCNX1-215ENST00000557428 HIRAP54198 1017 aaPredicted RBP10.72□□□□□ -0.69
PCNX1-215ENST00000557428 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.69
PCNX1-215ENST00000557428 TNIP1Q15025 636 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 PRPF38BQ5VTL8 546 aaKnown RBP10.72□□□□□ -0.69
PCNX1-215ENST00000557428 PPP1R42Q7Z4L9 355 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 NLRP3Q96P20 1036 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 CNOT7Q9UIV1 285 aaKnown RBP10.72□□□□□ -0.69
PCNX1-215ENST00000557428 ATP6V0A2Q9Y487 856 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 ABCC4O15439 1325 aa10.72□□□□□ -0.69
PCNX1-215ENST00000557428 IBTKQ9P2D0 1353 aaPredicted RBP10.72□□□□□ -0.69
PCNX1-215ENST00000557428 ERVV-1B6SEH8 477 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 ZNF157P51786 506 aaPredicted RBP10.71□□□□□ -0.69
PCNX1-215ENST00000557428 KIF23Q02241 960 aaPredicted RBP10.71□□□□□ -0.69
PCNX1-215ENST00000557428 TBC1D10BQ4KMP7 808 aaPredicted RBP10.71□□□□□ -0.69
PCNX1-215ENST00000557428 ANKRD36CQ5JPF3 1778 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 RBM26Q5T8P6 1007 aaKnown RBP10.71□□□□□ -0.69
PCNX1-215ENST00000557428 RGMBQ6NW40 437 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 KRT26Q7Z3Y9 468 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 MPNDQ8N594 471 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 C2orf69Q8N8R5 385 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 ZC3H15Q8WU90 426 aaKnown RBP10.71□□□□□ -0.69
PCNX1-215ENST00000557428 CDHR2Q9BYE9 1310 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 GBA2Q9HCG7 927 aaPredicted RBP10.71□□□□□ -0.69
PCNX1-215ENST00000557428 NUDCQ9Y266 331 aa10.71□□□□□ -0.69
PCNX1-215ENST00000557428 ADM5C9JUS6 153 aa10.7□□□□□ -0.7
PCNX1-215ENST00000557428 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-215ENST00000557428 SAMD7Q7Z3H4 446 aa10.7□□□□□ -0.7
PCNX1-215ENST00000557428 RNF39Q9H2S5 420 aa10.7□□□□□ -0.7
PCNX1-215ENST00000557428 SAGE1Q9NXZ1 904 aa10.7□□□□□ -0.7
PCNX1-215ENST00000557428 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
PCNX1-215ENST00000557428 CTU1Q7Z7A3 348 aaKnown RBP10.69□□□□□ -0.7
PCNX1-215ENST00000557428 ZNF428Q96B54 188 aa10.69□□□□□ -0.7
PCNX1-215ENST00000557428 DCPSQ96C86 337 aaKnown RBP10.69□□□□□ -0.7
PCNX1-215ENST00000557428 UTP14AQ9BVJ6 771 aaKnown RBP10.69□□□□□ -0.7
PCNX1-215ENST00000557428 VPS33BQ9H267 617 aa10.69□□□□□ -0.7
PCNX1-215ENST00000557428 RNF186Q9NXI6 227 aa10.69□□□□□ -0.7
PCNX1-215ENST00000557428 PGAP2Q9UHJ9 254 aa10.69□□□□□ -0.7
PCNX1-215ENST00000557428 DDX60Q8IY21 1712 aaKnown RBP10.69□□□□□ -0.7
PCNX1-215ENST00000557428 YDJCA8MPS7 323 aa10.68□□□□□ -0.7
PCNX1-215ENST00000557428 FAM155AB1AL88 458 aaPredicted RBP10.68□□□□□ -0.7
PCNX1-215ENST00000557428 PER1O15534 1290 aaPredicted RBP10.68□□□□□ -0.7
PCNX1-215ENST00000557428 KIAA2012Q0VF49 1180 aa10.68□□□□□ -0.7
PCNX1-215ENST00000557428 DDX46Q7L014 1031 aaKnown RBP10.68□□□□□ -0.7
PCNX1-215ENST00000557428 ZNF34Q8IZ26 560 aa10.68□□□□□ -0.7
PCNX1-215ENST00000557428 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
PCNX1-215ENST00000557428 THUMPD2Q9BTF0 503 aaKnown RBP10.68□□□□□ -0.7
PCNX1-215ENST00000557428 RTFDC1Q9BY42 306 aaPredicted RBP10.68□□□□□ -0.7
PCNX1-215ENST00000557428 DBNDD1Q9H9R9 158 aa10.68□□□□□ -0.7
PCNX1-215ENST00000557428 CLSPNQ9HAW4 1339 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 PSMD14O00487 310 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 RIMBP2O15034 1052 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 NEFMP07197 916 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 HCLS1P14317 486 aaPredicted RBP10.67□□□□□ -0.7
PCNX1-215ENST00000557428 PARP10Q53GL7 1025 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
PCNX1-215ENST00000557428 SP8Q8IXZ3 490 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 HDAC9Q9UKV0 1011 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 DUOX1Q9NRD9 1551 aa10.67□□□□□ -0.7
PCNX1-215ENST00000557428 EGFRP00533 1210 aa10.66□□□□□ -0.7
PCNX1-215ENST00000557428 SLC10A3P09131 477 aa10.66□□□□□ -0.7
PCNX1-215ENST00000557428 SULF1Q8IWU6 871 aa10.66□□□□□ -0.7
PCNX1-215ENST00000557428 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
PCNX1-215ENST00000557428 GGA3Q9NZ52 723 aa10.66□□□□□ -0.7
PCNX1-215ENST00000557428 LRRC37AA6NMS7 1700 aa10.66□□□□□ -0.7
PCNX1-215ENST00000557428 C6orf229H3BNL8 230 aa10.65□□□□□ -0.7
PCNX1-215ENST00000557428 HTATSF1O43719 755 aaKnown RBP10.65□□□□□ -0.7
PCNX1-215ENST00000557428 BBOX1O75936 387 aa10.65□□□□□ -0.7
PCNX1-215ENST00000557428 ANXA1P04083 346 aa10.65□□□□□ -0.7
PCNX1-215ENST00000557428 EIF2S2P20042 333 aaKnown RBP10.65□□□□□ -0.7
PCNX1-215ENST00000557428 EIF4A1P60842 406 aaKnown RBP10.65□□□□□ -0.7
PCNX1-215ENST00000557428 GRAPQ13588 217 aa10.65□□□□□ -0.7
PCNX1-215ENST00000557428 KIF4BQ2VIQ3 1234 aa10.65□□□□□ -0.7
PCNX1-215ENST00000557428 GRAPLQ8TC17 118 aaPredicted RBP10.65□□□□□ -0.7
PCNX1-215ENST00000557428 G3V3G9 751 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 ECE2O60344 883 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 C1QBPQ07021 282 aaKnown RBP10.64□□□□□ -0.71
PCNX1-215ENST00000557428 AIMP1Q12904 312 aaKnown RBP10.64□□□□□ -0.71
PCNX1-215ENST00000557428 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 WASHC4Q2M389 1173 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 RASAL3Q86YV0 1011 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 CCER1Q8TC90 406 aaPredicted RBP10.64□□□□□ -0.71
PCNX1-215ENST00000557428 NECTIN2Q92692 538 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 CDCA5Q96FF9 252 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
PCNX1-215ENST00000557428 TRMT112Q9UI30 125 aaKnown RBP10.64□□□□□ -0.71
PCNX1-215ENST00000557428 ASTN2O75129 1339 aaPredicted RBP10.63□□□□□ -0.71
PCNX1-215ENST00000557428 PAPPA2Q9BXP8 1791 aa10.63□□□□□ -0.71
PCNX1-215ENST00000557428 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
PCNX1-215ENST00000557428 DPF2Q92785 391 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms