RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SAP130Q9H0E3 1048 aa8.91□□□□□ -0.98
VRK1-207ENST00000557352 CXXC1Q9P0U4 656 aaPredicted RBP8.91□□□□□ -0.98
VRK1-207ENST00000557352 NAGPAQ9UK23 515 aa8.91□□□□□ -0.98
VRK1-207ENST00000557352 USP20Q9Y2K6 914 aa8.91□□□□□ -0.98
VRK1-207ENST00000557352 RTCBQ9Y3I0 505 aaKnown RBP8.91□□□□□ -0.98
VRK1-207ENST00000557352 SASH3O75995 380 aa8.9□□□□□ -0.98
VRK1-207ENST00000557352 NUDT8Q8WV74 236 aa8.9□□□□□ -0.98
VRK1-207ENST00000557352 COL26A1Q96A83 441 aa8.9□□□□□ -0.98
VRK1-207ENST00000557352 JPH1Q9HDC5 661 aaPredicted RBP8.9□□□□□ -0.98
VRK1-207ENST00000557352 PSAPL1Q6NUJ1 521 aa8.89□□□□□ -0.99
VRK1-207ENST00000557352 C16orf46Q6P387 395 aa8.89□□□□□ -0.99
VRK1-207ENST00000557352 CAPN12Q6ZSI9 719 aa8.89□□□□□ -0.99
VRK1-207ENST00000557352 MKNK1Q9BUB5 465 aa8.89□□□□□ -0.99
VRK1-207ENST00000557352 ZBTB42B2RXF5 422 aa8.88□□□□□ -0.99
VRK1-207ENST00000557352 APBA3O96018 575 aa8.88□□□□□ -0.99
VRK1-207ENST00000557352 RARAP10276 462 aa8.88□□□□□ -0.99
VRK1-207ENST00000557352 TRIM28Q13263 835 aaKnown RBP8.88□□□□□ -0.99
VRK1-207ENST00000557352 DHX32Q7L7V1 743 aaKnown RBP8.88□□□□□ -0.99
VRK1-207ENST00000557352 ETFBKMTQ8IXQ9 262 aa8.88□□□□□ -0.99
VRK1-207ENST00000557352 RGL4Q8IZJ4 473 aa8.88□□□□□ -0.99
VRK1-207ENST00000557352 CLP1Q92989 425 aaKnown RBP8.88□□□□□ -0.99
VRK1-207ENST00000557352 SEMA6BQ9H3T3 888 aa8.88□□□□□ -0.99
VRK1-207ENST00000557352 EGFRP00533 1210 aa8.87□□□□□ -0.99
VRK1-207ENST00000557352 AFF1P51825 1210 aaKnown RBP8.87□□□□□ -0.99
VRK1-207ENST00000557352 GRIK4Q16099 956 aa8.87□□□□□ -0.99
VRK1-207ENST00000557352 PCSK7Q16549 785 aa8.87□□□□□ -0.99
VRK1-207ENST00000557352 TRAPPC3LQ5T215 181 aa8.87□□□□□ -0.99
VRK1-207ENST00000557352 FAM35AQ86V20 835 aa8.87□□□□□ -0.99
VRK1-207ENST00000557352 CMTR1Q8N1G2 835 aaKnown RBP8.87□□□□□ -0.99
VRK1-207ENST00000557352 TRPM4Q8TD43 1214 aa8.87□□□□□ -0.99
VRK1-207ENST00000557352 SLAIN2Q9P270 581 aa8.87□□□□□ -0.99
VRK1-207ENST00000557352 XYLBO75191 536 aa8.86□□□□□ -0.99
VRK1-207ENST00000557352 RGS9O75916 674 aaPredicted RBP8.86□□□□□ -0.99
VRK1-207ENST00000557352 CPB1P15086 417 aa8.86□□□□□ -0.99
VRK1-207ENST00000557352 BRD2P25440 801 aaKnown RBP8.86□□□□□ -0.99
VRK1-207ENST00000557352 NAA30Q147X3 362 aaPredicted RBP8.86□□□□□ -0.99
VRK1-207ENST00000557352 FAM26DQ5JW98 314 aa8.86□□□□□ -0.99
VRK1-207ENST00000557352 KCNMB2Q9Y691 235 aa8.86□□□□□ -0.99
VRK1-207ENST00000557352 TNFRSF10BO14763 440 aa8.85□□□□□ -0.99
VRK1-207ENST00000557352 PTCD1O75127 700 aaKnown RBP8.85□□□□□ -0.99
VRK1-207ENST00000557352 GPLD1P80108 840 aa8.85□□□□□ -0.99
VRK1-207ENST00000557352 MLLT1Q03111 559 aaPredicted RBP8.85□□□□□ -0.99
VRK1-207ENST00000557352 RSPO4Q2I0M5 234 aaPredicted RBP8.85□□□□□ -0.99
VRK1-207ENST00000557352 NKAPLQ5M9Q1 402 aa8.85□□□□□ -0.99
VRK1-207ENST00000557352 ILDR2Q71H61 639 aa8.85□□□□□ -0.99
VRK1-207ENST00000557352 Q8N3U1 123 aa8.85□□□□□ -0.99
VRK1-207ENST00000557352 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
VRK1-207ENST00000557352 A0A0A0MRY4 1105 aa8.84□□□□□ -0.99
VRK1-207ENST00000557352 PERM1Q5SV97 790 aa8.84□□□□□ -0.99
VRK1-207ENST00000557352 LPIN3Q9BQK8 851 aa8.84□□□□□ -0.99
VRK1-207ENST00000557352 TLR7Q9NYK1 1049 aaKnown RBP8.84□□□□□ -0.99
VRK1-207ENST00000557352 FRRS1LQ9P0K9 344 aa8.84□□□□□ -0.99
VRK1-207ENST00000557352 NACC1Q96RE7 527 aa8.83□□□□□ -1
VRK1-207ENST00000557352 SELPP16109 830 aa8.82□□□□□ -1
VRK1-207ENST00000557352 NRLP54845 237 aa8.82□□□□□ -1
VRK1-207ENST00000557352 PLAURQ03405 335 aa8.82□□□□□ -1
VRK1-207ENST00000557352 GRIK5Q16478 980 aa8.82□□□□□ -1
VRK1-207ENST00000557352 ELMSAN1Q6PJG2 1045 aa8.82□□□□□ -1
VRK1-207ENST00000557352 HFE2Q6ZVN8 426 aa8.82□□□□□ -1
VRK1-207ENST00000557352 DMRTC2Q8IXT2 367 aaPredicted RBP8.82□□□□□ -1
VRK1-207ENST00000557352 MMP20O60882 483 aa8.81□□□□□ -1
VRK1-207ENST00000557352 ATP2B4P23634 1241 aa8.81□□□□□ -1
VRK1-207ENST00000557352 ARID4AP29374 1257 aaPredicted RBP8.81□□□□□ -1
VRK1-207ENST00000557352 TRIP4Q15650 581 aaPredicted RBP8.81□□□□□ -1
VRK1-207ENST00000557352 CCDC82Q8N4S0 544 aa8.81□□□□□ -1
VRK1-207ENST00000557352 ELNP15502 786 aa8.8□□□□□ -1
VRK1-207ENST00000557352 RAC1P63000 192 aa8.8□□□□□ -1
VRK1-207ENST00000557352 ADGRE1Q14246 886 aa8.8□□□□□ -1
VRK1-207ENST00000557352 MSL1Q68DK7 614 aa8.8□□□□□ -1
VRK1-207ENST00000557352 TTC9Q92623 222 aa8.8□□□□□ -1
VRK1-207ENST00000557352 STIM2Q9P246 746 aa8.8□□□□□ -1
VRK1-207ENST00000557352 C9orf172C9J069 976 aa8.79□□□□□ -1
VRK1-207ENST00000557352 PSAPP07602 524 aa8.79□□□□□ -1
VRK1-207ENST00000557352 ZAP70P43403 619 aa8.79□□□□□ -1
VRK1-207ENST00000557352 SHISA2Q6UWI4 295 aa8.79□□□□□ -1
VRK1-207ENST00000557352 PIK3R5Q8WYR1 880 aa8.79□□□□□ -1
VRK1-207ENST00000557352 SMG9Q9H0W8 520 aaKnown RBP8.79□□□□□ -1
VRK1-207ENST00000557352 C1orf115Q9H7X2 142 aa8.79□□□□□ -1
VRK1-207ENST00000557352 FAM13BQ9NYF5 915 aa8.79□□□□□ -1
VRK1-207ENST00000557352 SEPT3Q9UH03 358 aa8.79□□□□□ -1
VRK1-207ENST00000557352 LOC102724428A0A0B4J2F2 783 aa8.78□□□□□ -1
VRK1-207ENST00000557352 J3QW42 95 aa8.78□□□□□ -1
VRK1-207ENST00000557352 ZBTB39O15060 712 aa8.78□□□□□ -1
VRK1-207ENST00000557352 DYRK3O43781 588 aa8.78□□□□□ -1
VRK1-207ENST00000557352 EIF2AK2P19525 551 aaKnown RBP8.78□□□□□ -1
VRK1-207ENST00000557352 SIK1P57059 783 aa8.78□□□□□ -1
VRK1-207ENST00000557352 MBTPS1Q14703 1052 aa8.78□□□□□ -1
VRK1-207ENST00000557352 NLRP13Q86W25 1043 aa8.78□□□□□ -1
VRK1-207ENST00000557352 FMR1NBQ8N0W7 255 aaPredicted RBP8.78□□□□□ -1
VRK1-207ENST00000557352 LENG1Q96BZ8 264 aaPredicted RBP8.78□□□□□ -1
VRK1-207ENST00000557352 UBAP1LF5GYI3 381 aa8.77□□□□□ -1.01
VRK1-207ENST00000557352 HOXD8P13378 290 aaPredicted RBP8.77□□□□□ -1.01
VRK1-207ENST00000557352 SOX18P35713 384 aa8.77□□□□□ -1.01
VRK1-207ENST00000557352 NSUN5Q96P11 429 aaKnown RBP8.77□□□□□ -1.01
VRK1-207ENST00000557352 FOXD4L6Q3SYB3 417 aaPredicted RBP8.76□□□□□ -1.01
VRK1-207ENST00000557352 FOXD4L3Q6VB84 417 aaPredicted RBP8.76□□□□□ -1.01
VRK1-207ENST00000557352 WFDC8Q8IUA0 241 aa8.76□□□□□ -1.01
VRK1-207ENST00000557352 ABTB2Q8N961 1025 aa8.76□□□□□ -1.01
VRK1-207ENST00000557352 GPR152Q8TDT2 470 aa8.76□□□□□ -1.01
VRK1-207ENST00000557352 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms