RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ABCC4O15439 1325 aa16.71■□□□□ 0.27
PSEN1-221ENST00000557293 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
PSEN1-221ENST00000557293 SUPT20HQ8NEM7 779 aa16.71■□□□□ 0.27
PSEN1-221ENST00000557293 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
PSEN1-221ENST00000557293 BBOX1O75936 387 aa16.7■□□□□ 0.26
PSEN1-221ENST00000557293 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
PSEN1-221ENST00000557293 HUNKP57058 714 aa16.7■□□□□ 0.26
PSEN1-221ENST00000557293 PDIA6Q15084 440 aa16.7■□□□□ 0.26
PSEN1-221ENST00000557293 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
PSEN1-221ENST00000557293 TNIP1Q15025 636 aa16.69■□□□□ 0.26
PSEN1-221ENST00000557293 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
PSEN1-221ENST00000557293 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-221ENST00000557293 MPNDQ8N594 471 aa16.69■□□□□ 0.26
PSEN1-221ENST00000557293 THUMPD2Q9BTF0 503 aaKnown RBP16.69■□□□□ 0.26
PSEN1-221ENST00000557293 BCL2L13Q9BXK5 485 aa16.69■□□□□ 0.26
PSEN1-221ENST00000557293 EGFRP00533 1210 aa16.68■□□□□ 0.26
PSEN1-221ENST00000557293 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
PSEN1-221ENST00000557293 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
PSEN1-221ENST00000557293 KDM3BQ7LBC6 1761 aa16.68■□□□□ 0.26
PSEN1-221ENST00000557293 PDE4DIPQ5VU43 2346 aa16.68■□□□□ 0.26
PSEN1-221ENST00000557293 KIF23Q02241 960 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-221ENST00000557293 RGMBQ6NW40 437 aa16.67■□□□□ 0.26
PSEN1-221ENST00000557293 SAMD7Q7Z3H4 446 aa16.67■□□□□ 0.26
PSEN1-221ENST00000557293 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
PSEN1-221ENST00000557293 RNF186Q9NXI6 227 aa16.67■□□□□ 0.26
PSEN1-221ENST00000557293 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-221ENST00000557293 H7C1D1 291 aa16.66■□□□□ 0.26
PSEN1-221ENST00000557293 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-221ENST00000557293 SOX10P56693 466 aa16.66■□□□□ 0.26
PSEN1-221ENST00000557293 DPF2Q92785 391 aa16.66■□□□□ 0.26
PSEN1-221ENST00000557293 TMX4Q9H1E5 349 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-221ENST00000557293 PROSER3Q2NL68 480 aa16.65■□□□□ 0.26
PSEN1-221ENST00000557293 CSRNP1Q96S65 589 aa16.65■□□□□ 0.26
PSEN1-221ENST00000557293 PLEKHF1Q96S99 279 aa16.65■□□□□ 0.26
PSEN1-221ENST00000557293 KCNQ5Q9NR82 932 aa16.65■□□□□ 0.26
PSEN1-221ENST00000557293 SAGE1Q9NXZ1 904 aa16.65■□□□□ 0.26
PSEN1-221ENST00000557293 POLR2AP24928 1970 aaKnown RBP16.65■□□□□ 0.26
PSEN1-221ENST00000557293 ERBB4Q15303 1308 aa16.65■□□□□ 0.26
PSEN1-221ENST00000557293 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
PSEN1-221ENST00000557293 PSMD14O00487 310 aa16.64■□□□□ 0.25
PSEN1-221ENST00000557293 TRPA1O75762 1119 aa16.64■□□□□ 0.25
PSEN1-221ENST00000557293 ANXA1P04083 346 aa16.64■□□□□ 0.25
PSEN1-221ENST00000557293 NLRP10Q86W26 655 aa16.64■□□□□ 0.25
PSEN1-221ENST00000557293 GBA2Q9HCG7 927 aaPredicted RBP16.64■□□□□ 0.25
PSEN1-221ENST00000557293 DLG5Q8TDM6 1919 aa16.63■□□□□ 0.25
PSEN1-221ENST00000557293 GRAPQ13588 217 aa16.63■□□□□ 0.25
PSEN1-221ENST00000557293 TBC1D10BQ4KMP7 808 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-221ENST00000557293 KRT26Q7Z3Y9 468 aa16.63■□□□□ 0.25
PSEN1-221ENST00000557293 GRAPLQ8TC17 118 aaPredicted RBP16.63■□□□□ 0.25
PSEN1-221ENST00000557293 CCDC102AQ96A19 550 aa16.63■□□□□ 0.25
PSEN1-221ENST00000557293 LAMB2P55268 1798 aa16.63■□□□□ 0.25
PSEN1-221ENST00000557293 TAF1P21675 1872 aa16.63■□□□□ 0.25
PSEN1-221ENST00000557293 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
PSEN1-221ENST00000557293 C2orf69Q8N8R5 385 aa16.62■□□□□ 0.25
PSEN1-221ENST00000557293 ANKRD36CQ5JPF3 1778 aa16.61■□□□□ 0.25
PSEN1-221ENST00000557293 ZNF157P51786 506 aaPredicted RBP16.61■□□□□ 0.25
PSEN1-221ENST00000557293 NFE2L2Q16236 605 aa16.61■□□□□ 0.25
PSEN1-221ENST00000557293 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
PSEN1-221ENST00000557293 SLC10A3P09131 477 aa16.6■□□□□ 0.25
PSEN1-221ENST00000557293 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
PSEN1-221ENST00000557293 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
PSEN1-221ENST00000557293 RBM26Q5T8P6 1007 aaKnown RBP16.6■□□□□ 0.25
PSEN1-221ENST00000557293 COPS6Q7L5N1 327 aa16.6■□□□□ 0.25
PSEN1-221ENST00000557293 CCER1Q8TC90 406 aaPredicted RBP16.6■□□□□ 0.25
PSEN1-221ENST00000557293 DBNDD1Q9H9R9 158 aa16.6■□□□□ 0.25
PSEN1-221ENST00000557293 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
PSEN1-221ENST00000557293 RTL9Q8NET4 1388 aa16.6■□□□□ 0.25
PSEN1-221ENST00000557293 WASHC4Q2M389 1173 aa16.59■□□□□ 0.25
PSEN1-221ENST00000557293 PRPF38BQ5VTL8 546 aaKnown RBP16.59■□□□□ 0.25
PSEN1-221ENST00000557293 CTU1Q7Z7A3 348 aaKnown RBP16.59■□□□□ 0.25
PSEN1-221ENST00000557293 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
PSEN1-221ENST00000557293 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
PSEN1-221ENST00000557293 RIMBP2O15034 1052 aa16.58■□□□□ 0.24
PSEN1-221ENST00000557293 TMC4Q7Z404 712 aa16.58■□□□□ 0.24
PSEN1-221ENST00000557293 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
PSEN1-221ENST00000557293 CELF1Q92879 486 aaKnown RBP16.58■□□□□ 0.24
PSEN1-221ENST00000557293 DCPSQ96C86 337 aaKnown RBP16.58■□□□□ 0.24
PSEN1-221ENST00000557293 COL4A1P02462 1669 aa16.58■□□□□ 0.24
PSEN1-221ENST00000557293 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
PSEN1-221ENST00000557293 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
PSEN1-221ENST00000557293 GPSM2P81274 684 aa16.57■□□□□ 0.24
PSEN1-221ENST00000557293 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
PSEN1-221ENST00000557293 ZNF428Q96B54 188 aa16.57■□□□□ 0.24
PSEN1-221ENST00000557293 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
PSEN1-221ENST00000557293 LRRC37AA6NMS7 1700 aa16.56■□□□□ 0.24
PSEN1-221ENST00000557293 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
PSEN1-221ENST00000557293 AIMP1Q12904 312 aaKnown RBP16.56■□□□□ 0.24
PSEN1-221ENST00000557293 SF3B3Q15393 1217 aaKnown RBP16.56■□□□□ 0.24
PSEN1-221ENST00000557293 HSP90AB3PQ58FF7 597 aa16.56■□□□□ 0.24
PSEN1-221ENST00000557293 HPS5Q9UPZ3 1129 aa16.56■□□□□ 0.24
PSEN1-221ENST00000557293 ECE2O60344 883 aa16.55■□□□□ 0.24
PSEN1-221ENST00000557293 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
PSEN1-221ENST00000557293 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
PSEN1-221ENST00000557293 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
PSEN1-221ENST00000557293 AKAP11Q9UKA4 1901 aa16.55■□□□□ 0.24
PSEN1-221ENST00000557293 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
PSEN1-221ENST00000557293 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
PSEN1-221ENST00000557293 GGA3Q9NZ52 723 aa16.54■□□□□ 0.24
PSEN1-221ENST00000557293 C6orf229H3BNL8 230 aa16.53■□□□□ 0.24
PSEN1-221ENST00000557293 TBC1D16Q8TBP0 767 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms