RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 SUPT20HQ8NEM7 779 aa12.78□□□□□ -0.36
RIPK3-205ENST00000557253 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
RIPK3-205ENST00000557253 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
RIPK3-205ENST00000557253 EIF4A1P60842 406 aaKnown RBP12.77□□□□□ -0.37
RIPK3-205ENST00000557253 TNIP1Q15025 636 aa12.77□□□□□ -0.37
RIPK3-205ENST00000557253 GIGYF2Q6Y7W6 1299 aaKnown RBP12.77□□□□□ -0.37
RIPK3-205ENST00000557253 MPNDQ8N594 471 aa12.77□□□□□ -0.37
RIPK3-205ENST00000557253 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
RIPK3-205ENST00000557253 RTFDC1Q9BY42 306 aaPredicted RBP12.77□□□□□ -0.37
RIPK3-205ENST00000557253 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
RIPK3-205ENST00000557253 YDJCA8MPS7 323 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 H7C1D1 291 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 KIAA2012Q0VF49 1180 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 SAMD7Q7Z3H4 446 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 SP8Q8IXZ3 490 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 UTP14AQ9BVJ6 771 aaKnown RBP12.76□□□□□ -0.37
RIPK3-205ENST00000557253 LAMB2P55268 1798 aa12.76□□□□□ -0.37
RIPK3-205ENST00000557253 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
RIPK3-205ENST00000557253 TRPA1O75762 1119 aa12.75□□□□□ -0.37
RIPK3-205ENST00000557253 ANXA1P04083 346 aa12.75□□□□□ -0.37
RIPK3-205ENST00000557253 HCLS1P14317 486 aaPredicted RBP12.75□□□□□ -0.37
RIPK3-205ENST00000557253 PPP2R1AP30153 589 aa12.75□□□□□ -0.37
RIPK3-205ENST00000557253 KIF23Q02241 960 aaPredicted RBP12.75□□□□□ -0.37
RIPK3-205ENST00000557253 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
RIPK3-205ENST00000557253 SLC10A5Q5PT55 438 aa12.75□□□□□ -0.37
RIPK3-205ENST00000557253 RGMBQ6NW40 437 aa12.75□□□□□ -0.37
RIPK3-205ENST00000557253 DLG5Q8TDM6 1919 aa12.75□□□□□ -0.37
RIPK3-205ENST00000557253 PNISRQ8TF01 805 aaKnown RBP12.75□□□□□ -0.37
RIPK3-205ENST00000557253 TAF1P21675 1872 aa12.74□□□□□ -0.37
RIPK3-205ENST00000557253 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
RIPK3-205ENST00000557253 ADM5C9JUS6 153 aa12.74□□□□□ -0.37
RIPK3-205ENST00000557253 BBOX1O75936 387 aa12.74□□□□□ -0.37
RIPK3-205ENST00000557253 EGFRP00533 1210 aa12.74□□□□□ -0.37
RIPK3-205ENST00000557253 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
RIPK3-205ENST00000557253 TBC1D10BQ4KMP7 808 aaPredicted RBP12.74□□□□□ -0.37
RIPK3-205ENST00000557253 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
RIPK3-205ENST00000557253 GBA2Q9HCG7 927 aaPredicted RBP12.74□□□□□ -0.37
RIPK3-205ENST00000557253 RNF186Q9NXI6 227 aa12.74□□□□□ -0.37
RIPK3-205ENST00000557253 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
RIPK3-205ENST00000557253 DDX46Q7L014 1031 aaKnown RBP12.73□□□□□ -0.37
RIPK3-205ENST00000557253 KRT26Q7Z3Y9 468 aa12.73□□□□□ -0.37
RIPK3-205ENST00000557253 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
RIPK3-205ENST00000557253 DBNDD1Q9H9R9 158 aa12.73□□□□□ -0.37
RIPK3-205ENST00000557253 ANKRD36CQ5JPF3 1778 aa12.72□□□□□ -0.37
RIPK3-205ENST00000557253 PSMD14O00487 310 aa12.72□□□□□ -0.37
RIPK3-205ENST00000557253 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
RIPK3-205ENST00000557253 PROSER3Q2NL68 480 aa12.72□□□□□ -0.37
RIPK3-205ENST00000557253 SAGE1Q9NXZ1 904 aa12.72□□□□□ -0.37
RIPK3-205ENST00000557253 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
RIPK3-205ENST00000557253 NEFMP07197 916 aa12.71□□□□□ -0.37
RIPK3-205ENST00000557253 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
RIPK3-205ENST00000557253 GRAPQ13588 217 aa12.71□□□□□ -0.37
RIPK3-205ENST00000557253 PDIA6Q15084 440 aa12.71□□□□□ -0.37
RIPK3-205ENST00000557253 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.37
RIPK3-205ENST00000557253 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.37
RIPK3-205ENST00000557253 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
RIPK3-205ENST00000557253 CCDC102AQ96A19 550 aa12.71□□□□□ -0.37
RIPK3-205ENST00000557253 DCPSQ96C86 337 aaKnown RBP12.71□□□□□ -0.37
RIPK3-205ENST00000557253 KCNQ5Q9NR82 932 aa12.71□□□□□ -0.37
RIPK3-205ENST00000557253 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.37
RIPK3-205ENST00000557253 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
RIPK3-205ENST00000557253 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
RIPK3-205ENST00000557253 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
RIPK3-205ENST00000557253 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
RIPK3-205ENST00000557253 DPF2Q92785 391 aa12.7□□□□□ -0.38
RIPK3-205ENST00000557253 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
RIPK3-205ENST00000557253 POLR2AP24928 1970 aaKnown RBP12.7□□□□□ -0.38
RIPK3-205ENST00000557253 AKAP11Q9UKA4 1901 aa12.69□□□□□ -0.38
RIPK3-205ENST00000557253 NFE2L2Q16236 605 aa12.69□□□□□ -0.38
RIPK3-205ENST00000557253 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
RIPK3-205ENST00000557253 CTU1Q7Z7A3 348 aaKnown RBP12.69□□□□□ -0.38
RIPK3-205ENST00000557253 TSPYL4Q9UJ04 414 aa12.69□□□□□ -0.38
RIPK3-205ENST00000557253 NSFL1CQ9UNZ2 370 aaKnown RBP12.69□□□□□ -0.38
RIPK3-205ENST00000557253 ASTN2O75129 1339 aaPredicted RBP12.68□□□□□ -0.38
RIPK3-205ENST00000557253 C6orf229H3BNL8 230 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 ECE2O60344 883 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 SLC10A3P09131 477 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
RIPK3-205ENST00000557253 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
RIPK3-205ENST00000557253 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 POLLQ9UGP5 575 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 LRRC37AA6NMS7 1700 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 RTL9Q8NET4 1388 aa12.68□□□□□ -0.38
RIPK3-205ENST00000557253 COL4A1P02462 1669 aa12.67□□□□□ -0.38
RIPK3-205ENST00000557253 SH3TC1Q8TE82 1336 aa12.67□□□□□ -0.38
RIPK3-205ENST00000557253 GPSM2P81274 684 aa12.67□□□□□ -0.38
RIPK3-205ENST00000557253 TCIRG1Q13488 830 aa12.67□□□□□ -0.38
RIPK3-205ENST00000557253 KIF4BQ2VIQ3 1234 aa12.67□□□□□ -0.38
RIPK3-205ENST00000557253 HSP90AB3PQ58FF7 597 aa12.67□□□□□ -0.38
RIPK3-205ENST00000557253 HPS5Q9UPZ3 1129 aa12.67□□□□□ -0.38
RIPK3-205ENST00000557253 DDX60Q8IY21 1712 aaKnown RBP12.66□□□□□ -0.38
RIPK3-205ENST00000557253 RASAL3Q86YV0 1011 aa12.66□□□□□ -0.38
RIPK3-205ENST00000557253 SULF1Q8IWU6 871 aa12.66□□□□□ -0.38
RIPK3-205ENST00000557253 CDCA5Q96FF9 252 aa12.66□□□□□ -0.38
RIPK3-205ENST00000557253 GGA3Q9NZ52 723 aa12.66□□□□□ -0.38
RIPK3-205ENST00000557253 RPS12P25398 132 aaKnown RBP12.65□□□□□ -0.38
RIPK3-205ENST00000557253 RTL5Q5HYW3 569 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms