RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 EDEM1Q92611 657 aa12.88□□□□□ -0.35
CCDC175-205ENST00000556996 DNAJB12Q9NXW2 375 aaKnown RBP12.88□□□□□ -0.35
CCDC175-205ENST00000556996 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
CCDC175-205ENST00000556996 MAP3K6O95382 1288 aa12.87□□□□□ -0.35
CCDC175-205ENST00000556996 NUDT16Q96DE0 195 aaKnown RBP12.87□□□□□ -0.35
CCDC175-205ENST00000556996 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
CCDC175-205ENST00000556996 SLC6A14Q9UN76 642 aa12.87□□□□□ -0.35
CCDC175-205ENST00000556996 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
CCDC175-205ENST00000556996 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
CCDC175-205ENST00000556996 DHX32Q7L7V1 743 aaKnown RBP12.86□□□□□ -0.35
CCDC175-205ENST00000556996 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
CCDC175-205ENST00000556996 H3BRB1 525 aa12.85□□□□□ -0.35
CCDC175-205ENST00000556996 ICMTO60725 284 aa12.85□□□□□ -0.35
CCDC175-205ENST00000556996 ALBP02768 609 aa12.85□□□□□ -0.35
CCDC175-205ENST00000556996 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
CCDC175-205ENST00000556996 TUT1Q9H6E5 874 aaKnown RBP12.85□□□□□ -0.35
CCDC175-205ENST00000556996 EGFL7Q9UHF1 273 aa12.85□□□□□ -0.35
CCDC175-205ENST00000556996 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
CCDC175-205ENST00000556996 MMP20O60882 483 aa12.84□□□□□ -0.35
CCDC175-205ENST00000556996 PDGFAP04085 211 aa12.84□□□□□ -0.35
CCDC175-205ENST00000556996 MLLT1Q03111 559 aaPredicted RBP12.84□□□□□ -0.35
CCDC175-205ENST00000556996 ECM1Q16610 540 aa12.84□□□□□ -0.35
CCDC175-205ENST00000556996 LINC00114Q6XXX2 140 aa12.84□□□□□ -0.35
CCDC175-205ENST00000556996 C8orf86Q6ZUL3 223 aa12.84□□□□□ -0.35
CCDC175-205ENST00000556996 SCARF2Q96GP6 870 aaPredicted RBP12.84□□□□□ -0.35
CCDC175-205ENST00000556996 FAM13AO94988 1023 aa12.83□□□□□ -0.36
CCDC175-205ENST00000556996 ALAS2P22557 587 aa12.83□□□□□ -0.36
CCDC175-205ENST00000556996 IRS1P35568 1242 aa12.83□□□□□ -0.36
CCDC175-205ENST00000556996 A6NHS1 94 aa12.82□□□□□ -0.36
CCDC175-205ENST00000556996 FZD6O60353 706 aa12.82□□□□□ -0.36
CCDC175-205ENST00000556996 BRD1O95696 1058 aa12.82□□□□□ -0.36
CCDC175-205ENST00000556996 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
CCDC175-205ENST00000556996 NLRP13Q86W25 1043 aa12.82□□□□□ -0.36
CCDC175-205ENST00000556996 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
CCDC175-205ENST00000556996 POLIQ9UNA4 740 aa12.82□□□□□ -0.36
CCDC175-205ENST00000556996 M0R082 166 aa12.81□□□□□ -0.36
CCDC175-205ENST00000556996 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
CCDC175-205ENST00000556996 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
CCDC175-205ENST00000556996 TLR7Q9NYK1 1049 aaKnown RBP12.81□□□□□ -0.36
CCDC175-205ENST00000556996 MKL2Q9ULH7 1088 aa12.81□□□□□ -0.36
CCDC175-205ENST00000556996 MZF1P28698 734 aaPredicted RBP12.8□□□□□ -0.36
CCDC175-205ENST00000556996 KCNMA1Q12791 1236 aa12.8□□□□□ -0.36
CCDC175-205ENST00000556996 C20orf204Q6ZNR8 217 aa12.8□□□□□ -0.36
CCDC175-205ENST00000556996 BEND7Q8N7W2 519 aaPredicted RBP12.8□□□□□ -0.36
CCDC175-205ENST00000556996 TRPM4Q8TD43 1214 aa12.8□□□□□ -0.36
CCDC175-205ENST00000556996 SUV39H2Q9H5I1 410 aa12.8□□□□□ -0.36
CCDC175-205ENST00000556996 CCDC87Q9NVE4 849 aa12.8□□□□□ -0.36
CCDC175-205ENST00000556996 RNF225M0QZC1 329 aaPredicted RBP12.79□□□□□ -0.36
CCDC175-205ENST00000556996 GPLD1P80108 840 aa12.79□□□□□ -0.36
CCDC175-205ENST00000556996 ALKBH2Q6NS38 261 aa12.79□□□□□ -0.36
CCDC175-205ENST00000556996 KANK3Q6NY19 840 aa12.79□□□□□ -0.36
CCDC175-205ENST00000556996 HFE2Q6ZVN8 426 aa12.79□□□□□ -0.36
CCDC175-205ENST00000556996 GLYCTKQ8IVS8 523 aa12.79□□□□□ -0.36
CCDC175-205ENST00000556996 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
CCDC175-205ENST00000556996 TMEM63CQ9P1W3 806 aa12.79□□□□□ -0.36
CCDC175-205ENST00000556996 CPB1P15086 417 aa12.78□□□□□ -0.36
CCDC175-205ENST00000556996 AAMPQ13685 434 aa12.78□□□□□ -0.36
CCDC175-205ENST00000556996 COL9A3Q14050 684 aaPredicted RBP12.78□□□□□ -0.36
CCDC175-205ENST00000556996 FAM35AQ86V20 835 aa12.78□□□□□ -0.36
CCDC175-205ENST00000556996 TRIM11Q96F44 468 aa12.78□□□□□ -0.36
CCDC175-205ENST00000556996 NSUN5Q96P11 429 aaKnown RBP12.78□□□□□ -0.36
CCDC175-205ENST00000556996 FNDC3AQ9Y2H6 1198 aaKnown RBP12.78□□□□□ -0.36
CCDC175-205ENST00000556996 NRLP54845 237 aa12.77□□□□□ -0.37
CCDC175-205ENST00000556996 ARHGAP4P98171 946 aa12.77□□□□□ -0.37
CCDC175-205ENST00000556996 PSAPL1Q6NUJ1 521 aa12.77□□□□□ -0.37
CCDC175-205ENST00000556996 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.37
CCDC175-205ENST00000556996 NUDT8Q8WV74 236 aa12.77□□□□□ -0.37
CCDC175-205ENST00000556996 PHF20L1A8MW92 1017 aa12.76□□□□□ -0.37
CCDC175-205ENST00000556996 RASSF7Q02833 373 aa12.76□□□□□ -0.37
CCDC175-205ENST00000556996 PLAURQ03405 335 aa12.76□□□□□ -0.37
CCDC175-205ENST00000556996 C8orf34Q49A92 452 aa12.76□□□□□ -0.37
CCDC175-205ENST00000556996 TRAIPQ9BWF2 469 aa12.76□□□□□ -0.37
CCDC175-205ENST00000556996 ELP3Q9H9T3 547 aa12.76□□□□□ -0.37
CCDC175-205ENST00000556996 GNEQ9Y223 722 aaKnown RBP12.76□□□□□ -0.37
CCDC175-205ENST00000556996 GNB5O14775 395 aa12.75□□□□□ -0.37
CCDC175-205ENST00000556996 CYP2E1P05181 493 aaPredicted RBP12.75□□□□□ -0.37
CCDC175-205ENST00000556996 PSAPP07602 524 aa12.75□□□□□ -0.37
CCDC175-205ENST00000556996 COL8A1P27658 744 aa12.75□□□□□ -0.37
CCDC175-205ENST00000556996 PERM1Q5SV97 790 aa12.75□□□□□ -0.37
CCDC175-205ENST00000556996 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
CCDC175-205ENST00000556996 ZNF438Q7Z4V0 828 aa12.75□□□□□ -0.37
CCDC175-205ENST00000556996 OR13H1Q8NG92 308 aa12.75□□□□□ -0.37
CCDC175-205ENST00000556996 LPIN3Q9BQK8 851 aa12.75□□□□□ -0.37
CCDC175-205ENST00000556996 J3QW42 95 aa12.74□□□□□ -0.37
CCDC175-205ENST00000556996 HOXD8P13378 290 aaPredicted RBP12.74□□□□□ -0.37
CCDC175-205ENST00000556996 SOX18P35713 384 aa12.74□□□□□ -0.37
CCDC175-205ENST00000556996 PDE12Q6L8Q7 609 aaKnown RBP12.74□□□□□ -0.37
CCDC175-205ENST00000556996 JPH1Q9HDC5 661 aaPredicted RBP12.74□□□□□ -0.37
CCDC175-205ENST00000556996 ABI2Q9NYB9 513 aaPredicted RBP12.74□□□□□ -0.37
CCDC175-205ENST00000556996 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
CCDC175-205ENST00000556996 SOWAHDA6NJG2 315 aa12.73□□□□□ -0.37
CCDC175-205ENST00000556996 PRDM6Q9NQX0 595 aa12.73□□□□□ -0.37
CCDC175-205ENST00000556996 CNTN3Q9P232 1028 aa12.73□□□□□ -0.37
CCDC175-205ENST00000556996 NID1P14543 1247 aa12.72□□□□□ -0.37
CCDC175-205ENST00000556996 PCSK2P16519 638 aa12.72□□□□□ -0.37
CCDC175-205ENST00000556996 EIF2AK2P19525 551 aaKnown RBP12.72□□□□□ -0.37
CCDC175-205ENST00000556996 PCSK7Q16549 785 aa12.72□□□□□ -0.37
CCDC175-205ENST00000556996 GJD3Q8N144 294 aa12.72□□□□□ -0.37
CCDC175-205ENST00000556996 TTC39BQ5VTQ0 682 aaPredicted RBP12.71□□□□□ -0.37
CCDC175-205ENST00000556996 IVNS1ABPQ9Y6Y0 642 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms