RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
LINC00648-203ENST00000556923 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
LINC00648-203ENST00000556923 SASH3O75995 380 aa9.35□□□□□ -0.91
LINC00648-203ENST00000556923 SPATA31C1P0DKV0 1188 aa9.35□□□□□ -0.91
LINC00648-203ENST00000556923 NAA30Q147X3 362 aaPredicted RBP9.35□□□□□ -0.91
LINC00648-203ENST00000556923 SPDYE3A6NKU9 549 aa9.34□□□□□ -0.91
LINC00648-203ENST00000556923 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
LINC00648-203ENST00000556923 LILRB5O75023 590 aa9.34□□□□□ -0.91
LINC00648-203ENST00000556923 RARAP10276 462 aa9.34□□□□□ -0.91
LINC00648-203ENST00000556923 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
LINC00648-203ENST00000556923 PSAPL1Q6NUJ1 521 aa9.34□□□□□ -0.91
LINC00648-203ENST00000556923 DHX32Q7L7V1 743 aaKnown RBP9.34□□□□□ -0.91
LINC00648-203ENST00000556923 CMTR1Q8N1G2 835 aaKnown RBP9.34□□□□□ -0.91
LINC00648-203ENST00000556923 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
LINC00648-203ENST00000556923 JPH1Q9HDC5 661 aaPredicted RBP9.34□□□□□ -0.91
LINC00648-203ENST00000556923 KCNMB2Q9Y691 235 aa9.34□□□□□ -0.91
LINC00648-203ENST00000556923 ZBTB42B2RXF5 422 aa9.33□□□□□ -0.92
LINC00648-203ENST00000556923 PTCD1O75127 700 aaKnown RBP9.33□□□□□ -0.92
LINC00648-203ENST00000556923 EGFRP00533 1210 aa9.33□□□□□ -0.92
LINC00648-203ENST00000556923 XYLBO75191 536 aa9.32□□□□□ -0.92
LINC00648-203ENST00000556923 ATP2B4P23634 1241 aa9.32□□□□□ -0.92
LINC00648-203ENST00000556923 BAG6P46379 1132 aa9.32□□□□□ -0.92
LINC00648-203ENST00000556923 PRRT3Q5FWE3 981 aa9.32□□□□□ -0.92
LINC00648-203ENST00000556923 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
LINC00648-203ENST00000556923 FAM35AQ86V20 835 aa9.32□□□□□ -0.92
LINC00648-203ENST00000556923 TRPM4Q8TD43 1214 aa9.32□□□□□ -0.92
LINC00648-203ENST00000556923 CPB1P15086 417 aa9.31□□□□□ -0.92
LINC00648-203ENST00000556923 AFF1P51825 1210 aaKnown RBP9.31□□□□□ -0.92
LINC00648-203ENST00000556923 MLLT1Q03111 559 aaPredicted RBP9.31□□□□□ -0.92
LINC00648-203ENST00000556923 GPLD1P80108 840 aa9.3□□□□□ -0.92
LINC00648-203ENST00000556923 TRIP4Q15650 581 aaPredicted RBP9.3□□□□□ -0.92
LINC00648-203ENST00000556923 PCSK7Q16549 785 aa9.3□□□□□ -0.92
LINC00648-203ENST00000556923 LPIN3Q9BQK8 851 aa9.3□□□□□ -0.92
LINC00648-203ENST00000556923 SEPT3Q9UH03 358 aa9.3□□□□□ -0.92
LINC00648-203ENST00000556923 RGS9O75916 674 aaPredicted RBP9.29□□□□□ -0.92
LINC00648-203ENST00000556923 TRIM28Q13263 835 aaKnown RBP9.29□□□□□ -0.92
LINC00648-203ENST00000556923 PERM1Q5SV97 790 aa9.29□□□□□ -0.92
LINC00648-203ENST00000556923 TRAPPC3LQ5T215 181 aa9.29□□□□□ -0.92
LINC00648-203ENST00000556923 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
LINC00648-203ENST00000556923 ADAM23O75077 832 aa9.28□□□□□ -0.92
LINC00648-203ENST00000556923 PLAURQ03405 335 aa9.28□□□□□ -0.92
LINC00648-203ENST00000556923 STIM2Q9P246 746 aa9.28□□□□□ -0.92
LINC00648-203ENST00000556923 A0A0A0MRY4 1105 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 TMEM88BA6NKF7 163 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 ZBTB39O15060 712 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 MMP20O60882 483 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 PPP1R15AO75807 674 aaPredicted RBP9.27□□□□□ -0.93
LINC00648-203ENST00000556923 ZAP70P43403 619 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 NRLP54845 237 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 GRIK4Q16099 956 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 GRIK5Q16478 980 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 HFE2Q6ZVN8 426 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 ILDR2Q71H61 639 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 FRRS1LQ9P0K9 344 aa9.27□□□□□ -0.93
LINC00648-203ENST00000556923 APBA3O96018 575 aa9.26□□□□□ -0.93
LINC00648-203ENST00000556923 SCNN1AP37088 669 aa9.26□□□□□ -0.93
LINC00648-203ENST00000556923 FURINP09958 794 aa9.25□□□□□ -0.93
LINC00648-203ENST00000556923 ARID4AP29374 1257 aaPredicted RBP9.25□□□□□ -0.93
LINC00648-203ENST00000556923 ELMSAN1Q6PJG2 1045 aa9.25□□□□□ -0.93
LINC00648-203ENST00000556923 PSAPP07602 524 aa9.24□□□□□ -0.93
LINC00648-203ENST00000556923 GATA4P43694 442 aa9.24□□□□□ -0.93
LINC00648-203ENST00000556923 MSL1Q68DK7 614 aa9.24□□□□□ -0.93
LINC00648-203ENST00000556923 NLRP13Q86W25 1043 aa9.24□□□□□ -0.93
LINC00648-203ENST00000556923 DMRTC2Q8IXT2 367 aaPredicted RBP9.24□□□□□ -0.93
LINC00648-203ENST00000556923 ABTB2Q8N961 1025 aa9.24□□□□□ -0.93
LINC00648-203ENST00000556923 PIK3R5Q8WYR1 880 aa9.24□□□□□ -0.93
LINC00648-203ENST00000556923 NSUN5Q96P11 429 aaKnown RBP9.24□□□□□ -0.93
LINC00648-203ENST00000556923 SMG9Q9H0W8 520 aaKnown RBP9.24□□□□□ -0.93
LINC00648-203ENST00000556923 FAM13BQ9NYF5 915 aa9.24□□□□□ -0.93
LINC00648-203ENST00000556923 LOC100996750A0A140TA64 210 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 UBAP1LF5GYI3 381 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 J3QW42 95 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 K7ELQ4 463 aaPredicted RBP9.23□□□□□ -0.93
LINC00648-203ENST00000556923 HOXD8P13378 290 aaPredicted RBP9.23□□□□□ -0.93
LINC00648-203ENST00000556923 EIF2AK2P19525 551 aaKnown RBP9.23□□□□□ -0.93
LINC00648-203ENST00000556923 SOX18P35713 384 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 DOC2BQ14184 412 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 GPR152Q8TDT2 470 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 TTC9Q92623 222 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 NACC1Q96RE7 527 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
LINC00648-203ENST00000556923 LOC102724428A0A0B4J2F2 783 aa9.22□□□□□ -0.93
LINC00648-203ENST00000556923 ELNP15502 786 aa9.22□□□□□ -0.93
LINC00648-203ENST00000556923 SIK1P57059 783 aa9.22□□□□□ -0.93
LINC00648-203ENST00000556923 RAC1P63000 192 aa9.22□□□□□ -0.93
LINC00648-203ENST00000556923 FMR1NBQ8N0W7 255 aaPredicted RBP9.22□□□□□ -0.93
LINC00648-203ENST00000556923 SELPP16109 830 aa9.21□□□□□ -0.94
LINC00648-203ENST00000556923 SSFA2P28290 1259 aa9.21□□□□□ -0.94
LINC00648-203ENST00000556923 ATCAYQ86WG3 371 aa9.21□□□□□ -0.94
LINC00648-203ENST00000556923 HELQQ8TDG4 1101 aa9.21□□□□□ -0.94
LINC00648-203ENST00000556923 CARNS1A5YM72 827 aa9.2□□□□□ -0.94
LINC00648-203ENST00000556923 SHISA2Q6UWI4 295 aa9.2□□□□□ -0.94
LINC00648-203ENST00000556923 OR13H1Q8NG92 308 aa9.2□□□□□ -0.94
LINC00648-203ENST00000556923 PLD4Q96BZ4 506 aa9.2□□□□□ -0.94
LINC00648-203ENST00000556923 GHRHP01286 108 aa9.19□□□□□ -0.94
LINC00648-203ENST00000556923 WFDC8Q8IUA0 241 aa9.19□□□□□ -0.94
LINC00648-203ENST00000556923 FNDC3AQ9Y2H6 1198 aaKnown RBP9.19□□□□□ -0.94
LINC00648-203ENST00000556923 C9orf172C9J069 976 aa9.18□□□□□ -0.94
LINC00648-203ENST00000556923 COL13A1Q5TAT6 717 aaPredicted RBP9.18□□□□□ -0.94
LINC00648-203ENST00000556923 DTWD1Q8N5C7 304 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms