RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 RASSF7Q02833 373 aa10.07□□□□□ -0.8
HNRNPC-226ENST00000556628 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
HNRNPC-226ENST00000556628 CNKSR1Q969H4 720 aa10.07□□□□□ -0.8
HNRNPC-226ENST00000556628 RUNDC1Q96C34 613 aa10.07□□□□□ -0.8
HNRNPC-226ENST00000556628 BABAM1Q9NWV8 329 aa10.07□□□□□ -0.8
HNRNPC-226ENST00000556628 FAM177BA6PVY3 158 aa10.06□□□□□ -0.8
HNRNPC-226ENST00000556628 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
HNRNPC-226ENST00000556628 CCDC146Q8IYE0 955 aa10.06□□□□□ -0.8
HNRNPC-226ENST00000556628 MASTLQ96GX5 879 aa10.06□□□□□ -0.8
HNRNPC-226ENST00000556628 NYXQ9GZU5 481 aa10.06□□□□□ -0.8
HNRNPC-226ENST00000556628 COL11A2P13942 1736 aaPredicted RBP10.06□□□□□ -0.8
HNRNPC-226ENST00000556628 ERBB4Q15303 1308 aa10.06□□□□□ -0.8
HNRNPC-226ENST00000556628 NUP98P52948 1817 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 ERVV-1B6SEH8 477 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 C21orf2O43822 256 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 TOMM70O94826 608 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 SRGNP10124 158 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 EIF2S2P20042 333 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 HLFQ16534 295 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 PRKRIP1Q9H875 184 aaPredicted RBP10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 ARFGEF2Q9Y6D5 1785 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 TNRC6CQ9HCJ0 1690 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 MAP3K15Q6ZN16 1313 aa10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 ZC3H4Q9UPT8 1303 aaKnown RBP10.05□□□□□ -0.8
HNRNPC-226ENST00000556628 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
HNRNPC-226ENST00000556628 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
HNRNPC-226ENST00000556628 NPR1P16066 1061 aa10.04□□□□□ -0.8
HNRNPC-226ENST00000556628 HSPA6P17066 643 aa10.04□□□□□ -0.8
HNRNPC-226ENST00000556628 NMRK2Q9NPI5 230 aa10.04□□□□□ -0.8
HNRNPC-226ENST00000556628 FER1L6Q2WGJ9 1857 aa10.04□□□□□ -0.8
HNRNPC-226ENST00000556628 SLX4Q8IY92 1834 aa10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 ALDH1B1P30837 517 aa10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 POTEEQ6S8J3 1075 aa10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 TTLL7Q6ZT98 887 aa10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 ZBTB3Q9H5J0 574 aa10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 RRAGCQ9HB90 399 aa10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 ADAMTS8Q9UP79 889 aa10.03□□□□□ -0.8
HNRNPC-226ENST00000556628 DICER1Q9UPY3 1922 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 GLTPD2A6NH11 291 aa10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 NFKBIEO00221 500 aa10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 PPP1R37O75864 691 aa10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 GIGYF2Q6Y7W6 1299 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 PPP1R42Q7Z4L9 355 aa10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 TAOK3Q9H2K8 898 aa10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 LTBP3Q9NS15 1303 aa10.02□□□□□ -0.81
HNRNPC-226ENST00000556628 GPTP24298 496 aa10.01□□□□□ -0.81
HNRNPC-226ENST00000556628 CALD1Q05682 793 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-226ENST00000556628 ERFEQ4G0M1 354 aa10.01□□□□□ -0.81
HNRNPC-226ENST00000556628 PARP10Q53GL7 1025 aa10.01□□□□□ -0.81
HNRNPC-226ENST00000556628 CCDC93Q567U6 631 aa10.01□□□□□ -0.81
HNRNPC-226ENST00000556628 RBM46Q8TBY0 533 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-226ENST00000556628 NECTIN2Q92692 538 aa10.01□□□□□ -0.81
HNRNPC-226ENST00000556628 KLRG2A4D1S0 409 aaPredicted RBP10□□□□□ -0.81
HNRNPC-226ENST00000556628 CHL1O00533 1208 aa10□□□□□ -0.81
HNRNPC-226ENST00000556628 VEGFAP15692 232 aaPredicted RBP10□□□□□ -0.81
HNRNPC-226ENST00000556628 AIMP1Q12904 312 aaKnown RBP10□□□□□ -0.81
HNRNPC-226ENST00000556628 HSP90AB3PQ58FF7 597 aa10□□□□□ -0.81
HNRNPC-226ENST00000556628 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
HNRNPC-226ENST00000556628 RPGRQ92834 1020 aaKnown RBP10□□□□□ -0.81
HNRNPC-226ENST00000556628 IBTKQ9P2D0 1353 aaPredicted RBP10□□□□□ -0.81
HNRNPC-226ENST00000556628 ANKRD36CQ5JPF3 1778 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 ARHGAP33O14559 1287 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 APLP1P51693 650 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 PRELPP51888 382 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 FSTL1Q12841 308 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 HDGFL1Q5TGJ6 251 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 SUSD4Q5VX71 490 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 COPS6Q7L5N1 327 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 ZNF34Q8IZ26 560 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 RTKN2Q8IZC4 609 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 TMX4Q9H1E5 349 aaPredicted RBP9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 DDX21Q9NR30 783 aaKnown RBP eCLIP9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 RIC1Q4ADV7 1423 aa9.99□□□□□ -0.81
HNRNPC-226ENST00000556628 APAF1O14727 1248 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 ANXA1P04083 346 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 HOXB7P09629 217 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 FKBP4Q02790 459 aaKnown RBP eCLIP9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 PDIA6Q15084 440 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 SMC1BQ8NDV3 1235 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 XAGE3Q8WTP9 111 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 RBM17Q96I25 401 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 NLRP3Q96P20 1036 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 UTP14AQ9BVJ6 771 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 RNF123Q5XPI4 1314 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 UBN2Q6ZU65 1347 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 ABCC12Q96J65 1359 aa9.98□□□□□ -0.81
HNRNPC-226ENST00000556628 WDR90Q96KV7 1748 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 NTSR2O95665 410 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 GNAI1P63096 354 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 PROSER3Q2NL68 480 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 CRY2Q49AN0 593 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 ADGRD1Q6QNK2 874 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 C7orf43Q8WVR3 580 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 CHMP4AQ9BY43 222 aa9.97□□□□□ -0.81
HNRNPC-226ENST00000556628 CHPF2Q9P2E5 772 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms