RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 IL27Q8NEV9 243 aa22.19■■□□□ 1.14
SDR39U1-220ENST00000556548 LSG1Q9H089 658 aaKnown RBP22.19■■□□□ 1.14
SDR39U1-220ENST00000556548 CHMP5Q9NZZ3 219 aa22.19■■□□□ 1.14
SDR39U1-220ENST00000556548 IRS4O14654 1257 aaPredicted RBP22.18■■□□□ 1.14
SDR39U1-220ENST00000556548 ST18O60284 1047 aa22.18■■□□□ 1.14
SDR39U1-220ENST00000556548 ATP5JP18859 108 aa22.18■■□□□ 1.14
SDR39U1-220ENST00000556548 SMARCC1Q92922 1105 aaPredicted RBP22.18■■□□□ 1.14
SDR39U1-220ENST00000556548 NMIQ13287 307 aaPredicted RBP22.17■■□□□ 1.14
SDR39U1-220ENST00000556548 IFIT5Q13325 482 aaKnown RBP22.17■■□□□ 1.14
SDR39U1-220ENST00000556548 RUFY2Q8WXA3 655 aa22.17■■□□□ 1.14
SDR39U1-220ENST00000556548 PLA2G12BQ9BX93 195 aa22.17■■□□□ 1.14
SDR39U1-220ENST00000556548 GREM2Q9H772 168 aa22.17■■□□□ 1.14
SDR39U1-220ENST00000556548 CSF1RP07333 972 aa22.17■■□□□ 1.14
SDR39U1-220ENST00000556548 SMIM5Q71RC9 77 aa22.17■■□□□ 1.14
SDR39U1-220ENST00000556548 PTH1RQ03431 593 aa22.16■■□□□ 1.14
SDR39U1-220ENST00000556548 ZNF34Q8IZ26 560 aa22.16■■□□□ 1.14
SDR39U1-220ENST00000556548 TTLL11Q8NHH1 800 aa22.16■■□□□ 1.14
SDR39U1-220ENST00000556548 RAD50Q92878 1312 aa22.16■■□□□ 1.14
SDR39U1-220ENST00000556548 HSPA4P34932 840 aa22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 UPF3BQ9BZI7 483 aaKnown RBP22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 CDHR2Q9BYE9 1310 aa22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 CHGBP05060 677 aa22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 ITGA6P23229 1130 aa22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 CTSWP56202 376 aa22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 SUSD4Q5VX71 490 aa22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 NOL8Q76FK4 1167 aaKnown RBP22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 LINC00116Q8NCU8 138 aa22.15■■□□□ 1.14
SDR39U1-220ENST00000556548 A0A0D9SFI3 127 aa22.14■■□□□ 1.14
SDR39U1-220ENST00000556548 A0A1B0GUL7 405 aa22.14■■□□□ 1.14
SDR39U1-220ENST00000556548 CIAO1O76071 339 aa22.14■■□□□ 1.14
SDR39U1-220ENST00000556548 CEP126Q9P2H0 1117 aa22.14■■□□□ 1.14
SDR39U1-220ENST00000556548 CAMTA2O94983 1202 aa22.14■■□□□ 1.13
SDR39U1-220ENST00000556548 DDIT3P35638 169 aa22.14■■□□□ 1.13
SDR39U1-220ENST00000556548 DDX46Q7L014 1031 aaKnown RBP22.14■■□□□ 1.13
SDR39U1-220ENST00000556548 NUP98P52948 1817 aa22.14■■□□□ 1.13
SDR39U1-220ENST00000556548 HCLS1P14317 486 aaPredicted RBP22.13■■□□□ 1.13
SDR39U1-220ENST00000556548 ANAPC15P60006 121 aa22.13■■□□□ 1.13
SDR39U1-220ENST00000556548 RASEFQ8IZ41 740 aa22.13■■□□□ 1.13
SDR39U1-220ENST00000556548 AFF2P51816 1311 aa22.13■■□□□ 1.13
SDR39U1-220ENST00000556548 MYH14Q7Z406 1995 aaKnown RBP22.12■■□□□ 1.13
SDR39U1-220ENST00000556548 GJD4Q96KN9 370 aaPredicted RBP22.12■■□□□ 1.13
SDR39U1-220ENST00000556548 HAUS7Q99871 368 aa22.12■■□□□ 1.13
SDR39U1-220ENST00000556548 SNX14Q9Y5W7 946 aa22.12■■□□□ 1.13
SDR39U1-220ENST00000556548 HIP1O00291 1037 aa22.11■■□□□ 1.13
SDR39U1-220ENST00000556548 PDE8AO60658 829 aa22.11■■□□□ 1.13
SDR39U1-220ENST00000556548 LDHAL6AQ6ZMR3 332 aa22.11■■□□□ 1.13
SDR39U1-220ENST00000556548 GPR108Q9NPR9 543 aa22.11■■□□□ 1.13
SDR39U1-220ENST00000556548 NIP7Q9Y221 180 aaKnown RBP eCLIP22.11■■□□□ 1.13
SDR39U1-220ENST00000556548 ADORA1P30542 326 aa22.11■■□□□ 1.13
SDR39U1-220ENST00000556548 ANKRD18BA2A2Z9 1011 aa22.1■■□□□ 1.13
SDR39U1-220ENST00000556548 PRPF40BQ6NWY9 871 aaKnown RBP22.1■■□□□ 1.13
SDR39U1-220ENST00000556548 ZNF609O15014 1411 aa22.1■■□□□ 1.13
SDR39U1-220ENST00000556548 GOLIM4O00461 696 aa22.09■■□□□ 1.13
SDR39U1-220ENST00000556548 ANKRD36CQ5JPF3 1778 aa22.09■■□□□ 1.13
SDR39U1-220ENST00000556548 CNNM1Q9NRU3 951 aa22.09■■□□□ 1.13
SDR39U1-220ENST00000556548 EPB41L2O43491 1005 aaKnown RBP22.09■■□□□ 1.13
SDR39U1-220ENST00000556548 METTL24Q5JXM2 366 aa22.09■■□□□ 1.13
SDR39U1-220ENST00000556548 ZNF589Q86UQ0 364 aaPredicted RBP22.09■■□□□ 1.13
SDR39U1-220ENST00000556548 UTP14AQ9BVJ6 771 aaKnown RBP22.09■■□□□ 1.13
SDR39U1-220ENST00000556548 SLFNL1Q499Z3 407 aa22.08■■□□□ 1.13
SDR39U1-220ENST00000556548 GORABQ5T7V8 394 aa22.08■■□□□ 1.13
SDR39U1-220ENST00000556548 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.08■■□□□ 1.13
SDR39U1-220ENST00000556548 CCDC171Q6TFL3 1326 aa22.08■■□□□ 1.12
SDR39U1-220ENST00000556548 SH3TC1Q8TE82 1336 aa22.08■■□□□ 1.12
SDR39U1-220ENST00000556548 KCNJ4P48050 445 aa22.08■■□□□ 1.12
SDR39U1-220ENST00000556548 ZGPATQ8N5A5 531 aaKnown RBP22.08■■□□□ 1.12
SDR39U1-220ENST00000556548 IFIT1P09914 478 aaKnown RBP22.07■■□□□ 1.12
SDR39U1-220ENST00000556548 XAGE2Q96GT9 111 aa22.07■■□□□ 1.12
SDR39U1-220ENST00000556548 SEC62Q99442 399 aaKnown RBP22.07■■□□□ 1.12
SDR39U1-220ENST00000556548 RTN4Q9NQC3 1192 aaKnown RBP22.07■■□□□ 1.12
SDR39U1-220ENST00000556548 RIPOR2Q9Y4F9 1068 aa22.07■■□□□ 1.12
SDR39U1-220ENST00000556548 CPA1P15085 419 aa22.07■■□□□ 1.12
SDR39U1-220ENST00000556548 PAG1Q9NWQ8 432 aa22.07■■□□□ 1.12
SDR39U1-220ENST00000556548 CCDC129Q6ZRS4 1044 aa22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 TMX3Q96JJ7 454 aa22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 SNRKQ9NRH2 765 aa22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 AKAP2Q9Y2D5 859 aa22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 RBM8AQ9Y5S9 174 aaKnown RBP22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 EP400Q96L91 3159 aa22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 LARP6Q9BRS8 491 aaKnown RBP22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
SDR39U1-220ENST00000556548 FKBP4Q02790 459 aaKnown RBP eCLIP22.05■■□□□ 1.12
SDR39U1-220ENST00000556548 BICDL1Q6ZP65 573 aa22.05■■□□□ 1.12
SDR39U1-220ENST00000556548 TTC39AQ5SRH9 613 aa22.05■■□□□ 1.12
SDR39U1-220ENST00000556548 TNPO1Q92973 898 aaKnown RBP22.05■■□□□ 1.12
SDR39U1-220ENST00000556548 IL17RAQ96F46 866 aa22.05■■□□□ 1.12
SDR39U1-220ENST00000556548 SEC31BQ9NQW1 1179 aa22.05■■□□□ 1.12
SDR39U1-220ENST00000556548 CIZ1Q9ULV3 898 aaPredicted RBP22.05■■□□□ 1.12
SDR39U1-220ENST00000556548 ADCK5Q3MIX3 580 aa22.04■■□□□ 1.12
SDR39U1-220ENST00000556548 KBTBD3Q8NAB2 608 aa22.04■■□□□ 1.12
SDR39U1-220ENST00000556548 HELBQ8NG08 1087 aaPredicted RBP22.04■■□□□ 1.12
SDR39U1-220ENST00000556548 RIC1Q4ADV7 1423 aa22.04■■□□□ 1.12
SDR39U1-220ENST00000556548 NTSR2O95665 410 aa22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 CASTP20810 708 aaKnown RBP22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 NECTIN1Q15223 517 aa22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 ATP2B3Q16720 1220 aa22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 PARP10Q53GL7 1025 aa22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 CCDC158Q5M9N0 1113 aa22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 SEPT12Q8IYM1 358 aa22.03■■□□□ 1.12
SDR39U1-220ENST00000556548 MAP4K1Q92918 833 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1023.4 ms