RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
NRXN3-213ENST00000556496 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
NRXN3-213ENST00000556496 TRIM44Q96DX7 344 aaPredicted RBP12.65□□□□□ -0.38
NRXN3-213ENST00000556496 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
NRXN3-213ENST00000556496 TAF5LO75529 589 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 GJB2P29033 226 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 NEUROD6Q96NK8 337 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 HAUS7Q99871 368 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 TAF6LQ9Y6J9 622 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 BLOC1S2Q6QNY1 142 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 DDX46Q7L014 1031 aaKnown RBP12.64□□□□□ -0.39
NRXN3-213ENST00000556496 ATG9AQ7Z3C6 839 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 USP48Q86UV5 1035 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 TPCN1Q9ULQ1 816 aa12.64□□□□□ -0.39
NRXN3-213ENST00000556496 CHGBP05060 677 aa12.63□□□□□ -0.39
NRXN3-213ENST00000556496 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
NRXN3-213ENST00000556496 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
NRXN3-213ENST00000556496 CCDC173Q0VFZ6 552 aa12.63□□□□□ -0.39
NRXN3-213ENST00000556496 ST3GAL1Q11201 340 aa12.63□□□□□ -0.39
NRXN3-213ENST00000556496 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
NRXN3-213ENST00000556496 HMG20BQ9P0W2 317 aa12.63□□□□□ -0.39
NRXN3-213ENST00000556496 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
NRXN3-213ENST00000556496 F13A1P00488 732 aa12.62□□□□□ -0.39
NRXN3-213ENST00000556496 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
NRXN3-213ENST00000556496 TIMM10P62072 90 aa12.62□□□□□ -0.39
NRXN3-213ENST00000556496 ZNF594Q96JF6 807 aaPredicted RBP12.62□□□□□ -0.39
NRXN3-213ENST00000556496 SEC62Q99442 399 aaKnown RBP12.62□□□□□ -0.39
NRXN3-213ENST00000556496 CNPY2Q9Y2B0 182 aa12.62□□□□□ -0.39
NRXN3-213ENST00000556496 CCDC129Q6ZRS4 1044 aa12.62□□□□□ -0.39
NRXN3-213ENST00000556496 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
NRXN3-213ENST00000556496 JCADQ9P266 1359 aa12.62□□□□□ -0.39
NRXN3-213ENST00000556496 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 LRRC24Q50LG9 513 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
NRXN3-213ENST00000556496 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 EYA2O00167 538 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 ANKRD1Q15327 319 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 MCMDC2Q4G0Z9 681 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 USPL1Q5W0Q7 1092 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 ZNF609O15014 1411 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 RFX7Q2KHR2 1363 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 ESPNB1AK53 854 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 GOLIM4O00461 696 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 DNAJC10Q8IXB1 793 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 TMEM87AQ8NBN3 555 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 PIGBQ92521 554 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 ISCA1Q9BUE6 129 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 GPR108Q9NPR9 543 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 BTG4Q9NY30 223 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
NRXN3-213ENST00000556496 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
NRXN3-213ENST00000556496 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
NRXN3-213ENST00000556496 KRT32Q14532 448 aa12.6□□□□□ -0.39
NRXN3-213ENST00000556496 TPRNQ4KMQ1 711 aa12.6□□□□□ -0.39
NRXN3-213ENST00000556496 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
NRXN3-213ENST00000556496 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
NRXN3-213ENST00000556496 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
NRXN3-213ENST00000556496 FIBPO43427 364 aa12.59□□□□□ -0.39
NRXN3-213ENST00000556496 TOB2Q14106 344 aaPredicted RBP12.59□□□□□ -0.39
NRXN3-213ENST00000556496 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
NRXN3-213ENST00000556496 A0A1B0GUL7 405 aa12.59□□□□□ -0.39
NRXN3-213ENST00000556496 CIAO1O76071 339 aa12.59□□□□□ -0.39
NRXN3-213ENST00000556496 CLCN1P35523 988 aa12.59□□□□□ -0.39
NRXN3-213ENST00000556496 CCDC57Q2TAC2 916 aa12.59□□□□□ -0.39
NRXN3-213ENST00000556496 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
NRXN3-213ENST00000556496 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
NRXN3-213ENST00000556496 TEX13AQ9BXU3 409 aaPredicted RBP12.59□□□□□ -0.39
NRXN3-213ENST00000556496 ALDH8A1Q9H2A2 487 aaPredicted RBP12.59□□□□□ -0.39
NRXN3-213ENST00000556496 SLFNL1Q499Z3 407 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 FAM89AQ96GI7 184 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 CCDC85AQ96PX6 553 aaPredicted RBP12.58□□□□□ -0.4
NRXN3-213ENST00000556496 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 NUP188Q5SRE5 1749 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 STARD3NLO95772 234 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 CYP21A2P08686 494 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 DNM1Q05193 864 aaKnown RBP12.58□□□□□ -0.4
NRXN3-213ENST00000556496 STK3Q13188 491 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 VSIG10Q8N0Z9 540 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
NRXN3-213ENST00000556496 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
NRXN3-213ENST00000556496 SHANK3Q9BYB0 1731 aa12.57□□□□□ -0.4
NRXN3-213ENST00000556496 PHF14O94880 888 aa12.57□□□□□ -0.4
NRXN3-213ENST00000556496 IFIT1P09914 478 aaKnown RBP12.57□□□□□ -0.4
NRXN3-213ENST00000556496 UBE2HP62256 183 aa12.57□□□□□ -0.4
NRXN3-213ENST00000556496 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
NRXN3-213ENST00000556496 TRIM28Q13263 835 aaKnown RBP12.57□□□□□ -0.4
NRXN3-213ENST00000556496 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
NRXN3-213ENST00000556496 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
NRXN3-213ENST00000556496 TJP1Q07157 1748 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms