RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 KCTD17Q8N5Z5 321 aa7.99□□□□□ -1.13
SRP54-211ENST00000556445 DCAF5Q96JK2 942 aa7.99□□□□□ -1.13
SRP54-211ENST00000556445 SUV39H2Q9H5I1 410 aa7.99□□□□□ -1.13
SRP54-211ENST00000556445 RTCBQ9Y3I0 505 aaKnown RBP7.99□□□□□ -1.13
SRP54-211ENST00000556445 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.99□□□□□ -1.13
SRP54-211ENST00000556445 GNB5O14775 395 aa7.98□□□□□ -1.13
SRP54-211ENST00000556445 SSFA2P28290 1259 aa7.98□□□□□ -1.13
SRP54-211ENST00000556445 SCNN1AP37088 669 aa7.98□□□□□ -1.13
SRP54-211ENST00000556445 ZFATQ9P243 1243 aa7.98□□□□□ -1.13
SRP54-211ENST00000556445 BAZ1BQ9UIG0 1483 aaKnown RBP7.98□□□□□ -1.13
SRP54-211ENST00000556445 CARNS1A5YM72 827 aa7.97□□□□□ -1.13
SRP54-211ENST00000556445 EGFRP00533 1210 aa7.97□□□□□ -1.13
SRP54-211ENST00000556445 PDIA4P13667 645 aaKnown RBP7.97□□□□□ -1.13
SRP54-211ENST00000556445 RGL4Q8IZJ4 473 aa7.97□□□□□ -1.13
SRP54-211ENST00000556445 PNMA5Q96PV4 448 aa7.97□□□□□ -1.13
SRP54-211ENST00000556445 KCNMB2Q9Y691 235 aa7.97□□□□□ -1.13
SRP54-211ENST00000556445 CCDC88BA6NC98 1476 aa7.97□□□□□ -1.13
SRP54-211ENST00000556445 MAP3K6O95382 1288 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 ALBP02768 609 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 COL9A3Q14050 684 aaPredicted RBP7.96□□□□□ -1.14
SRP54-211ENST00000556445 PHLDB3Q6NSJ2 640 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 C20orf204Q6ZNR8 217 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 TRIM11Q96F44 468 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 UBE2OQ9C0C9 1292 aaKnown RBP7.96□□□□□ -1.14
SRP54-211ENST00000556445 PRDM6Q9NQX0 595 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 DNAJB12Q9NXW2 375 aaKnown RBP7.96□□□□□ -1.14
SRP54-211ENST00000556445 STIM2Q9P246 746 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 SLC6A14Q9UN76 642 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 HMGXB3Q12766 1538 aa7.96□□□□□ -1.14
SRP54-211ENST00000556445 EIF4G1Q04637 1599 aaKnown RBP7.96□□□□□ -1.14
SRP54-211ENST00000556445 ZBTB39O15060 712 aa7.95□□□□□ -1.14
SRP54-211ENST00000556445 SASH3O75995 380 aa7.95□□□□□ -1.14
SRP54-211ENST00000556445 ITGB2P05107 769 aa7.95□□□□□ -1.14
SRP54-211ENST00000556445 TARSP26639 723 aaKnown RBP7.95□□□□□ -1.14
SRP54-211ENST00000556445 KRT25Q7Z3Z0 450 aa7.95□□□□□ -1.14
SRP54-211ENST00000556445 MICALL1Q8N3F8 863 aa7.95□□□□□ -1.14
SRP54-211ENST00000556445 NCAPD3P42695 1498 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 M0R082 166 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 PIK3R2O00459 728 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 XYLBO75191 536 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 TBC1D8BQ0IIM8 1120 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 TRIP4Q15650 581 aaPredicted RBP7.94□□□□□ -1.14
SRP54-211ENST00000556445 C8orf86Q6ZUL3 223 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 CMTR1Q8N1G2 835 aaKnown RBP7.94□□□□□ -1.14
SRP54-211ENST00000556445 ZNF417Q8TAU3 575 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 ZNF587Q96SQ5 575 aaPredicted RBP7.94□□□□□ -1.14
SRP54-211ENST00000556445 IGFLR1Q9H665 355 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 NAGPAQ9UK23 515 aa7.94□□□□□ -1.14
SRP54-211ENST00000556445 KRBA1A5PL33 1030 aa7.93□□□□□ -1.14
SRP54-211ENST00000556445 ZBTB42B2RXF5 422 aa7.93□□□□□ -1.14
SRP54-211ENST00000556445 RARAP10276 462 aa7.93□□□□□ -1.14
SRP54-211ENST00000556445 ZAP70P43403 619 aa7.93□□□□□ -1.14
SRP54-211ENST00000556445 ALYREFQ86V81 257 aaKnown RBP7.93□□□□□ -1.14
SRP54-211ENST00000556445 HELQQ8TDG4 1101 aa7.93□□□□□ -1.14
SRP54-211ENST00000556445 USTQ9Y2C2 406 aa7.93□□□□□ -1.14
SRP54-211ENST00000556445 PLA2G4EQ3MJ16 856 aa7.92□□□□□ -1.14
SRP54-211ENST00000556445 DHX32Q7L7V1 743 aaKnown RBP7.92□□□□□ -1.14
SRP54-211ENST00000556445 ABTB2Q8N961 1025 aa7.92□□□□□ -1.14
SRP54-211ENST00000556445 TRPM4Q8TD43 1214 aa7.92□□□□□ -1.14
SRP54-211ENST00000556445 NOP53Q9NZM5 478 aaKnown RBP7.92□□□□□ -1.14
SRP54-211ENST00000556445 NID1P14543 1247 aa7.91□□□□□ -1.14
SRP54-211ENST00000556445 GTF3C2Q8WUA4 911 aaPredicted RBP7.91□□□□□ -1.14
SRP54-211ENST00000556445 PLVAPQ9BX97 442 aa7.91□□□□□ -1.14
SRP54-211ENST00000556445 GPLD1P80108 840 aa7.9□□□□□ -1.14
SRP54-211ENST00000556445 GPR152Q8TDT2 470 aa7.9□□□□□ -1.14
SRP54-211ENST00000556445 PIK3R5Q8WYR1 880 aa7.9□□□□□ -1.14
SRP54-211ENST00000556445 TLR7Q9NYK1 1049 aaKnown RBP7.9□□□□□ -1.14
SRP54-211ENST00000556445 MMP20O60882 483 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 NRLP54845 237 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 PCSK7Q16549 785 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 GPAT2Q6NUI2 795 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 FAM35AQ86V20 835 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 NLRP13Q86W25 1043 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
SRP54-211ENST00000556445 UBAP1LF5GYI3 381 aa7.88□□□□□ -1.15
SRP54-211ENST00000556445 LILRB5O75023 590 aa7.88□□□□□ -1.15
SRP54-211ENST00000556445 HOXD8P13378 290 aaPredicted RBP7.88□□□□□ -1.15
SRP54-211ENST00000556445 MLLT1Q03111 559 aaPredicted RBP7.88□□□□□ -1.15
SRP54-211ENST00000556445 MTMR3Q13615 1198 aa7.88□□□□□ -1.15
SRP54-211ENST00000556445 ATCAYQ86WG3 371 aa7.88□□□□□ -1.15
SRP54-211ENST00000556445 NUDT8Q8WV74 236 aa7.88□□□□□ -1.15
SRP54-211ENST00000556445 LPIN3Q9BQK8 851 aa7.88□□□□□ -1.15
SRP54-211ENST00000556445 JPH1Q9HDC5 661 aaPredicted RBP7.88□□□□□ -1.15
SRP54-211ENST00000556445 IGHA1P01876 353 aa7.87□□□□□ -1.15
SRP54-211ENST00000556445 CPB1P15086 417 aa7.87□□□□□ -1.15
SRP54-211ENST00000556445 MPSTP25325 297 aa7.87□□□□□ -1.15
SRP54-211ENST00000556445 AFF1P51825 1210 aaKnown RBP7.87□□□□□ -1.15
SRP54-211ENST00000556445 PLAURQ03405 335 aa7.87□□□□□ -1.15
SRP54-211ENST00000556445 PERM1Q5SV97 790 aa7.87□□□□□ -1.15
SRP54-211ENST00000556445 ILDR2Q71H61 639 aa7.87□□□□□ -1.15
SRP54-211ENST00000556445 FRRS1LQ9P0K9 344 aa7.87□□□□□ -1.15
SRP54-211ENST00000556445 PROCP04070 461 aa7.86□□□□□ -1.15
SRP54-211ENST00000556445 NPR3P17342 541 aa7.86□□□□□ -1.15
SRP54-211ENST00000556445 SOX18P35713 384 aa7.86□□□□□ -1.15
SRP54-211ENST00000556445 GRIK5Q16478 980 aa7.86□□□□□ -1.15
SRP54-211ENST00000556445 RETREG2Q8NC44 543 aa7.86□□□□□ -1.15
SRP54-211ENST00000556445 IGSF3O75054 1194 aa7.85□□□□□ -1.15
SRP54-211ENST00000556445 RGS9O75916 674 aaPredicted RBP7.85□□□□□ -1.15
SRP54-211ENST00000556445 PSAPP07602 524 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms