RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 KIF24Q5T7B8 1368 aa17.88■□□□□ 0.45
LRP1-211ENST00000556356 CDC42BPBQ9Y5S2 1711 aa17.88■□□□□ 0.45
LRP1-211ENST00000556356 CCDC178Q5BJE1 867 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 SSBP05455 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
LRP1-211ENST00000556356 HMGN5P82970 282 aaKnown RBP17.87■□□□□ 0.45
LRP1-211ENST00000556356 STIM1Q13586 685 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 CIZ1Q9ULV3 898 aaPredicted RBP17.87■□□□□ 0.45
LRP1-211ENST00000556356 ADGRB3O60242 1522 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 USP19O94966 1318 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 SSRP1Q08945 709 aaKnown RBP17.87■□□□□ 0.45
LRP1-211ENST00000556356 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 EHMT1Q9H9B1 1298 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 UNC13BO14795 1591 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 SPATA31A3Q5VYP0 1347 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 EYA2O00167 538 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 OFD1O75665 1012 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 SLC4A8Q2Y0W8 1093 aa17.87■□□□□ 0.45
LRP1-211ENST00000556356 RNF17Q9BXT8 1623 aaKnown RBP17.87■□□□□ 0.45
LRP1-211ENST00000556356 UFL1O94874 794 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 NF2P35240 595 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 DCTPP1Q9H773 170 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 LIMCH1Q9UPQ0 1083 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 TNNQ9UQP3 1299 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 MCMDC2Q4G0Z9 681 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 CCDC82Q8N4S0 544 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 C8orf76Q96K31 380 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 NEK1Q96PY6 1258 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 MAGEB6P1A0A0J9YX57 407 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 KRT23Q9C075 422 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 LDHBP07195 334 aaKnown RBP17.86■□□□□ 0.45
LRP1-211ENST00000556356 NFKBIBQ15653 356 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 CAVIN1Q6NZI2 390 aaKnown RBP17.86■□□□□ 0.45
LRP1-211ENST00000556356 PICALMQ13492 652 aa17.86■□□□□ 0.45
LRP1-211ENST00000556356 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 LMOD1P29536 600 aaPredicted RBP17.85■□□□□ 0.45
LRP1-211ENST00000556356 VEZTQ9HBM0 779 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 SDSP20132 328 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 CCDC12Q8WUD4 166 aaPredicted RBP17.85■□□□□ 0.45
LRP1-211ENST00000556356 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 RLBP1P12271 317 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 FILIP1LQ4L180 1135 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 ZBTB40Q9NUA8 1239 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 GGA1Q9UJY5 639 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 ERBB3P21860 1342 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 GNAT2P19087 354 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 DACH1Q9UI36 760 aa17.85■□□□□ 0.45
LRP1-211ENST00000556356 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 GIGYF1O75420 1035 aaPredicted RBP17.84■□□□□ 0.45
LRP1-211ENST00000556356 TSPY3P0CV98 308 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 TSPY8P0CW00 308 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 ESR2Q92731 530 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 CNNM2Q9H8M5 875 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 RBM26Q5T8P6 1007 aaKnown RBP17.84■□□□□ 0.45
LRP1-211ENST00000556356 ERBB4Q15303 1308 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 MCM5P33992 734 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 STX8Q9UNK0 236 aa17.84■□□□□ 0.45
LRP1-211ENST00000556356 TRAK2O60296 914 aa17.83■□□□□ 0.45
LRP1-211ENST00000556356 NLRP5P59047 1200 aa17.83■□□□□ 0.45
LRP1-211ENST00000556356 LOC102724428A0A0B4J2F2 783 aa17.83■□□□□ 0.44
LRP1-211ENST00000556356 SIK1P57059 783 aa17.83■□□□□ 0.44
LRP1-211ENST00000556356 CCDC194A0A1B0GVG4 234 aa17.83■□□□□ 0.44
LRP1-211ENST00000556356 RNF113AO15541 343 aaKnown RBP17.83■□□□□ 0.44
LRP1-211ENST00000556356 GCKRQ14397 625 aa17.83■□□□□ 0.44
LRP1-211ENST00000556356 PUM3Q15397 648 aaKnown RBP17.83■□□□□ 0.44
LRP1-211ENST00000556356 TCIRG1Q13488 830 aa17.83■□□□□ 0.44
LRP1-211ENST00000556356 CT47A1Q5JQC4 288 aaPredicted RBP17.83■□□□□ 0.44
LRP1-211ENST00000556356 THRAP3Q9Y2W1 955 aaKnown RBP17.83■□□□□ 0.44
LRP1-211ENST00000556356 SUPT20HQ8NEM7 779 aa17.82■□□□□ 0.44
LRP1-211ENST00000556356 USP16Q9Y5T5 823 aa17.82■□□□□ 0.44
LRP1-211ENST00000556356 C16orf71Q8IYS4 520 aaPredicted RBP17.82■□□□□ 0.44
LRP1-211ENST00000556356 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
LRP1-211ENST00000556356 TNMDQ9H2S6 317 aa17.82■□□□□ 0.44
LRP1-211ENST00000556356 DIP2CQ9Y2E4 1556 aa17.82■□□□□ 0.44
LRP1-211ENST00000556356 IARSP41252 1262 aaKnown RBP17.82■□□□□ 0.44
LRP1-211ENST00000556356 CCT2P78371 535 aaKnown RBP17.82■□□□□ 0.44
LRP1-211ENST00000556356 DPP8Q6V1X1 898 aaPredicted RBP17.82■□□□□ 0.44
LRP1-211ENST00000556356 WTAPQ15007 396 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 CEP57L1Q8IYX8 460 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 KCNQ3O43525 872 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 ALDH1B1P30837 517 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 TMTC2Q8N394 836 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 MAGEB6Q8N7X4 407 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 PRM3Q9NNZ6 103 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 ALKQ9UM73 1620 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
LRP1-211ENST00000556356 MICU3Q86XE3 530 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 VAT1LQ9HCJ6 419 aa17.81■□□□□ 0.44
LRP1-211ENST00000556356 TRIM37O94972 964 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 FERMT3Q86UX7 667 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 ZBTB7BO15156 539 aaPredicted RBP17.8■□□□□ 0.44
LRP1-211ENST00000556356 PDE6BP35913 854 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 TNNI2P48788 182 aa17.8■□□□□ 0.44
LRP1-211ENST00000556356 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms