RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 CRY2Q49AN0 593 aa14.25□□□□□ -0.13
SYNE2-221ENST00000556342 SYNE4Q8N205 404 aa14.25□□□□□ -0.13
SYNE2-221ENST00000556342 PRDM10Q9NQV6 1147 aa14.25□□□□□ -0.13
SYNE2-221ENST00000556342 ABCC12Q96J65 1359 aa14.24□□□□□ -0.13
SYNE2-221ENST00000556342 SNPHO15079 494 aa14.24□□□□□ -0.13
SYNE2-221ENST00000556342 CTCFP49711 727 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-221ENST00000556342 PNMA8AQ86V59 439 aaPredicted RBP14.24□□□□□ -0.13
SYNE2-221ENST00000556342 GPC2Q8N158 579 aa14.24□□□□□ -0.13
SYNE2-221ENST00000556342 AIDAQ96BJ3 306 aa14.24□□□□□ -0.13
SYNE2-221ENST00000556342 PSMD1Q99460 953 aa14.24□□□□□ -0.13
SYNE2-221ENST00000556342 ADAMTSL1Q8N6G6 1762 aa14.24□□□□□ -0.13
SYNE2-221ENST00000556342 MAP1SQ66K74 1059 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-221ENST00000556342 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
SYNE2-221ENST00000556342 CNTROBQ8N137 903 aa14.23□□□□□ -0.13
SYNE2-221ENST00000556342 JDP2Q8WYK2 163 aa14.23□□□□□ -0.13
SYNE2-221ENST00000556342 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
SYNE2-221ENST00000556342 MIS18AQ9NYP9 233 aa14.23□□□□□ -0.13
SYNE2-221ENST00000556342 RASSF10A6NK89 507 aa14.22□□□□□ -0.13
SYNE2-221ENST00000556342 ERVV-1B6SEH8 477 aa14.22□□□□□ -0.13
SYNE2-221ENST00000556342 CC2D2BQ6DHV5 1058 aa14.22□□□□□ -0.13
SYNE2-221ENST00000556342 NGEFQ8N5V2 710 aa14.22□□□□□ -0.13
SYNE2-221ENST00000556342 RYDENQ9NUL5 291 aaKnown RBP14.22□□□□□ -0.13
SYNE2-221ENST00000556342 WBP1LQ9NX94 342 aa14.22□□□□□ -0.13
SYNE2-221ENST00000556342 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.13
SYNE2-221ENST00000556342 DEFB115Q30KQ5 88 aa14.21□□□□□ -0.13
SYNE2-221ENST00000556342 PNISRQ8TF01 805 aaKnown RBP14.21□□□□□ -0.13
SYNE2-221ENST00000556342 FAM163AQ96GL9 167 aaPredicted RBP14.21□□□□□ -0.13
SYNE2-221ENST00000556342 IBTKQ9P2D0 1353 aaPredicted RBP14.21□□□□□ -0.14
SYNE2-221ENST00000556342 LAMB4A4D0S4 1761 aa14.2□□□□□ -0.14
SYNE2-221ENST00000556342 HOXA10P31260 410 aaPredicted RBP14.2□□□□□ -0.14
SYNE2-221ENST00000556342 EIF6P56537 245 aaKnown RBP14.2□□□□□ -0.14
SYNE2-221ENST00000556342 LCE2DQ5TA82 110 aaPredicted RBP14.2□□□□□ -0.14
SYNE2-221ENST00000556342 KIF6Q6ZMV9 814 aa14.2□□□□□ -0.14
SYNE2-221ENST00000556342 TTLL7Q6ZT98 887 aa14.2□□□□□ -0.14
SYNE2-221ENST00000556342 RPGRQ92834 1020 aaKnown RBP14.2□□□□□ -0.14
SYNE2-221ENST00000556342 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
SYNE2-221ENST00000556342 COL4A5P29400 1685 aa14.2□□□□□ -0.14
SYNE2-221ENST00000556342 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
SYNE2-221ENST00000556342 PPP1R37O75864 691 aa14.19□□□□□ -0.14
SYNE2-221ENST00000556342 GPTP24298 496 aa14.19□□□□□ -0.14
SYNE2-221ENST00000556342 LMOD1P29536 600 aaPredicted RBP14.19□□□□□ -0.14
SYNE2-221ENST00000556342 LBX1P52954 281 aa14.19□□□□□ -0.14
SYNE2-221ENST00000556342 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
SYNE2-221ENST00000556342 GRIPAP1Q4V328 841 aa14.19□□□□□ -0.14
SYNE2-221ENST00000556342 TMEM92Q6UXU6 159 aa14.19□□□□□ -0.14
SYNE2-221ENST00000556342 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
SYNE2-221ENST00000556342 RRP7AQ9Y3A4 280 aaKnown RBP14.19□□□□□ -0.14
SYNE2-221ENST00000556342 GJA3Q9Y6H8 435 aa14.19□□□□□ -0.14
SYNE2-221ENST00000556342 WDR33Q9C0J8 1336 aaKnown RBP14.18□□□□□ -0.14
SYNE2-221ENST00000556342 MYL6BP14649 208 aa14.18□□□□□ -0.14
SYNE2-221ENST00000556342 SCNN1DP51172 638 aa14.18□□□□□ -0.14
SYNE2-221ENST00000556342 SUSD4Q5VX71 490 aa14.18□□□□□ -0.14
SYNE2-221ENST00000556342 SLC51AQ86UW1 340 aa14.18□□□□□ -0.14
SYNE2-221ENST00000556342 LARGE2Q8N3Y3 721 aa14.18□□□□□ -0.14
SYNE2-221ENST00000556342 CRAMP1Q96RY5 1269 aa14.18□□□□□ -0.14
SYNE2-221ENST00000556342 ZBTB3Q9H5J0 574 aa14.18□□□□□ -0.14
SYNE2-221ENST00000556342 ABT1Q9ULW3 272 aaKnown RBP14.18□□□□□ -0.14
SYNE2-221ENST00000556342 PPEF1O14829 653 aaPredicted RBP14.17□□□□□ -0.14
SYNE2-221ENST00000556342 NEFMP07197 916 aa14.17□□□□□ -0.14
SYNE2-221ENST00000556342 HSPA8P11142 646 aaKnown RBP14.17□□□□□ -0.14
SYNE2-221ENST00000556342 EPS15P42566 896 aa14.17□□□□□ -0.14
SYNE2-221ENST00000556342 MAP2K1Q02750 393 aaPredicted RBP14.17□□□□□ -0.14
SYNE2-221ENST00000556342 LTBP1Q14766 1721 aa14.17□□□□□ -0.14
SYNE2-221ENST00000556342 NTSR2O95665 410 aa14.16□□□□□ -0.14
SYNE2-221ENST00000556342 NIM1KQ8IY84 436 aa14.16□□□□□ -0.14
SYNE2-221ENST00000556342 ZNF34Q8IZ26 560 aa14.16□□□□□ -0.14
SYNE2-221ENST00000556342 RBM17Q96I25 401 aaKnown RBP14.16□□□□□ -0.14
SYNE2-221ENST00000556342 THUMPD2Q9BTF0 503 aaKnown RBP14.16□□□□□ -0.14
SYNE2-221ENST00000556342 KDM3BQ7LBC6 1761 aa14.15□□□□□ -0.14
SYNE2-221ENST00000556342 TCERG1O14776 1098 aaKnown RBP14.15□□□□□ -0.14
SYNE2-221ENST00000556342 FMR1Q06787 632 aaKnown RBP eCLIP14.15□□□□□ -0.14
SYNE2-221ENST00000556342 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
SYNE2-221ENST00000556342 GIGYF2Q6Y7W6 1299 aaKnown RBP14.15□□□□□ -0.14
SYNE2-221ENST00000556342 PLEKHF1Q96S99 279 aa14.15□□□□□ -0.14
SYNE2-221ENST00000556342 ERBB4Q15303 1308 aa14.15□□□□□ -0.15
SYNE2-221ENST00000556342 NUP98P52948 1817 aa14.14□□□□□ -0.15
SYNE2-221ENST00000556342 PPIP5K2O43314 1243 aa14.14□□□□□ -0.15
SYNE2-221ENST00000556342 PARP10Q53GL7 1025 aa14.14□□□□□ -0.15
SYNE2-221ENST00000556342 USP50Q70EL3 339 aaPredicted RBP14.14□□□□□ -0.15
SYNE2-221ENST00000556342 CAPNS2Q96L46 248 aa14.14□□□□□ -0.15
SYNE2-221ENST00000556342 ECE1P42892 770 aa14.13□□□□□ -0.15
SYNE2-221ENST00000556342 AOC3Q16853 763 aa14.13□□□□□ -0.15
SYNE2-221ENST00000556342 LRP10Q7Z4F1 713 aa14.13□□□□□ -0.15
SYNE2-221ENST00000556342 PPP1R42Q7Z4L9 355 aa14.13□□□□□ -0.15
SYNE2-221ENST00000556342 ABHD8Q96I13 439 aa14.13□□□□□ -0.15
SYNE2-221ENST00000556342 NLRP3Q96P20 1036 aa14.13□□□□□ -0.15
SYNE2-221ENST00000556342 TRAF5O00463 557 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 ST18O60284 1047 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 CST9Q5W186 159 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 CYP4F22Q6NT55 531 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 PAXIP1Q6ZW49 1069 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-221ENST00000556342 TMX4Q9H1E5 349 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-221ENST00000556342 VPS33BQ9H267 617 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 GPRC5DQ9NZD1 345 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 ATP6V0A2Q9Y487 856 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 THSD7BQ9C0I4 1608 aa14.12□□□□□ -0.15
SYNE2-221ENST00000556342 CXCL9Q07325 125 aa14.11□□□□□ -0.15
SYNE2-221ENST00000556342 GRM1Q13255 1194 aa14.11□□□□□ -0.15
SYNE2-221ENST00000556342 PDIA6Q15084 440 aa14.11□□□□□ -0.15
SYNE2-221ENST00000556342 SLC10A5Q5PT55 438 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms