RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 CHMP4CQ96CF2 233 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 FPGT-TNNI3KV9GXZ4 949 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 SLC27A2O14975 620 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
NEK9-209ENST00000556170 SASH1O94885 1247 aa17.53■□□□□ 0.4
NEK9-209ENST00000556170 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
NEK9-209ENST00000556170 LSG1Q9H089 658 aaKnown RBP17.53■□□□□ 0.4
NEK9-209ENST00000556170 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
NEK9-209ENST00000556170 UBE2HP62256 183 aa17.53■□□□□ 0.4
NEK9-209ENST00000556170 POLA2Q14181 598 aa17.53■□□□□ 0.4
NEK9-209ENST00000556170 CLCN1P35523 988 aa17.53■□□□□ 0.4
NEK9-209ENST00000556170 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
NEK9-209ENST00000556170 MPHOSPH8Q99549 860 aa17.53■□□□□ 0.4
NEK9-209ENST00000556170 TBC1D2BQ9UPU7 963 aa17.53■□□□□ 0.4
NEK9-209ENST00000556170 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
NEK9-209ENST00000556170 CCDC82Q8N4S0 544 aa17.52■□□□□ 0.4
NEK9-209ENST00000556170 LETM1O95202 739 aaPredicted RBP17.52■□□□□ 0.4
NEK9-209ENST00000556170 MCMDC2Q4G0Z9 681 aa17.52■□□□□ 0.4
NEK9-209ENST00000556170 VPS53Q5VIR6 699 aa17.52■□□□□ 0.4
NEK9-209ENST00000556170 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
NEK9-209ENST00000556170 AOX1Q06278 1338 aa17.52■□□□□ 0.4
NEK9-209ENST00000556170 TMEM94Q12767 1356 aa17.52■□□□□ 0.39
NEK9-209ENST00000556170 KINO60870 393 aaKnown RBP17.52■□□□□ 0.39
NEK9-209ENST00000556170 ME3Q16798 604 aa17.52■□□□□ 0.39
NEK9-209ENST00000556170 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 ZDHHC9Q9Y397 364 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 IL2RBP14784 551 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 CREBRFQ8IUR6 639 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 PAG1Q9NWQ8 432 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 LARGE1O95461 756 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 STK38Q15208 465 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 MAP3K11Q16584 847 aa17.51■□□□□ 0.39
NEK9-209ENST00000556170 TRIM29Q14134 588 aa17.5■□□□□ 0.39
NEK9-209ENST00000556170 ADCY5O95622 1261 aa17.5■□□□□ 0.39
NEK9-209ENST00000556170 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
NEK9-209ENST00000556170 PLBD2Q8NHP8 589 aa17.5■□□□□ 0.39
NEK9-209ENST00000556170 CYP27B1O15528 508 aa17.49■□□□□ 0.39
NEK9-209ENST00000556170 SLFNL1Q499Z3 407 aa17.49■□□□□ 0.39
NEK9-209ENST00000556170 APOBRQ0VD83 1088 aa17.49■□□□□ 0.39
NEK9-209ENST00000556170 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
NEK9-209ENST00000556170 DBNLQ9UJU6 430 aaKnown RBP17.49■□□□□ 0.39
NEK9-209ENST00000556170 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
NEK9-209ENST00000556170 ZNF589Q86UQ0 364 aaPredicted RBP17.49■□□□□ 0.39
NEK9-209ENST00000556170 ABCF2Q9UG63 623 aa17.49■□□□□ 0.39
NEK9-209ENST00000556170 POLR3DP05423 398 aaPredicted RBP17.48■□□□□ 0.39
NEK9-209ENST00000556170 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
NEK9-209ENST00000556170 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
NEK9-209ENST00000556170 ADCY9O60503 1353 aa17.48■□□□□ 0.39
NEK9-209ENST00000556170 A0A1B0GUL7 405 aa17.48■□□□□ 0.39
NEK9-209ENST00000556170 JAK2O60674 1132 aa17.48■□□□□ 0.39
NEK9-209ENST00000556170 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.48■□□□□ 0.395e-6■■■■■ 34.6
NEK9-209ENST00000556170 SCAND2PQ9GZW5 306 aaPredicted RBP17.48■□□□□ 0.39
NEK9-209ENST00000556170 TPCN1Q9ULQ1 816 aa17.48■□□□□ 0.39
NEK9-209ENST00000556170 IL15P40933 162 aaPredicted RBP17.48■□□□□ 0.39
NEK9-209ENST00000556170 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
NEK9-209ENST00000556170 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
NEK9-209ENST00000556170 NPHP4O75161 1426 aaPredicted RBP17.47■□□□□ 0.39
NEK9-209ENST00000556170 ZNF445P59923 1031 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 TTC12Q9H892 705 aaPredicted RBP17.47■□□□□ 0.39
NEK9-209ENST00000556170 AKAP2Q9Y2D5 859 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 NRDCO43847 1150 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 CHGBP05060 677 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 ANKARQ7Z5J8 1434 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 CFAP45Q9UL16 551 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 CDC37L1Q7L3B6 337 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 CTNNA3Q9UI47 895 aa17.47■□□□□ 0.39
NEK9-209ENST00000556170 EXOC5O00471 708 aa17.46■□□□□ 0.39
NEK9-209ENST00000556170 PIP4K2BP78356 416 aa17.46■□□□□ 0.39
NEK9-209ENST00000556170 CUL4AQ13619 759 aa17.46■□□□□ 0.39
NEK9-209ENST00000556170 BTG4Q9NY30 223 aa17.46■□□□□ 0.39
NEK9-209ENST00000556170 RGS12O14924 1447 aa17.46■□□□□ 0.39
NEK9-209ENST00000556170 AKAP17AQ02040 695 aaKnown RBP17.46■□□□□ 0.38
NEK9-209ENST00000556170 ZNF213O14771 459 aa17.45■□□□□ 0.38
NEK9-209ENST00000556170 RPS6KB1P23443 525 aa17.45■□□□□ 0.38
NEK9-209ENST00000556170 AIDAQ96BJ3 306 aa17.45■□□□□ 0.38
NEK9-209ENST00000556170 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
NEK9-209ENST00000556170 GOLGA8BA8MQT2 603 aa17.45■□□□□ 0.38
NEK9-209ENST00000556170 FILIP1Q7Z7B0 1213 aa17.45■□□□□ 0.38
NEK9-209ENST00000556170 KIF20BQ96Q89 1820 aa17.45■□□□□ 0.38
NEK9-209ENST00000556170 NUP133Q8WUM0 1156 aa17.45■□□□□ 0.38
NEK9-209ENST00000556170 ZNF396Q96N95 335 aaPredicted RBP17.45■□□□□ 0.38
NEK9-209ENST00000556170 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
NEK9-209ENST00000556170 EYA2O00167 538 aa17.44■□□□□ 0.38
NEK9-209ENST00000556170 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
NEK9-209ENST00000556170 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
NEK9-209ENST00000556170 LRP2BPQ9P2M1 347 aa17.44■□□□□ 0.38
NEK9-209ENST00000556170 ERICH2A1L162 156 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 RXRAP19793 462 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 DDIT3P35638 169 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 TTLL5Q6EMB2 1281 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 SLAIN2Q9P270 581 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 TDO2P48775 406 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 PTPN12Q05209 780 aaKnown RBP17.43■□□□□ 0.38
NEK9-209ENST00000556170 SLC9C2Q5TAH2 1124 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 ZSWIM6Q9HCJ5 1215 aa17.43■□□□□ 0.38
NEK9-209ENST00000556170 DIP2AQ14689 1571 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms