RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 BCL2L13Q9BXK5 485 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 GLIS2Q9BZE0 524 aaPredicted RBP14.24□□□□□ -0.13
CHGA-205ENST00000556098 MCOLN1Q9GZU1 580 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 MYH16Q9H6N6 1097 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 TLL2Q9Y6L7 1015 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
CHGA-205ENST00000556098 MAP3K15Q6ZN16 1313 aa14.23□□□□□ -0.13
CHGA-205ENST00000556098 TMPOP42166 694 aaKnown RBP14.23□□□□□ -0.13
CHGA-205ENST00000556098 SUSD4Q5VX71 490 aa14.23□□□□□ -0.13
CHGA-205ENST00000556098 ADARB2Q9NS39 739 aaKnown RBP14.23□□□□□ -0.13
CHGA-205ENST00000556098 SALL2Q9Y467 1007 aaPredicted RBP14.23□□□□□ -0.13
CHGA-205ENST00000556098 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
CHGA-205ENST00000556098 DDX60Q8IY21 1712 aaKnown RBP14.22□□□□□ -0.13
CHGA-205ENST00000556098 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
CHGA-205ENST00000556098 CRY2Q49AN0 593 aa14.22□□□□□ -0.13
CHGA-205ENST00000556098 RAD17O75943 681 aa14.21□□□□□ -0.13
CHGA-205ENST00000556098 GMPSP49915 693 aaPredicted RBP14.21□□□□□ -0.13
CHGA-205ENST00000556098 RRP1P56182 461 aaKnown RBP14.21□□□□□ -0.13
CHGA-205ENST00000556098 CIAPIN1Q6FI81 312 aa14.21□□□□□ -0.13
CHGA-205ENST00000556098 C3orf67Q6ZVT6 689 aa14.21□□□□□ -0.13
CHGA-205ENST00000556098 ZNF428Q96B54 188 aa14.21□□□□□ -0.13
CHGA-205ENST00000556098 CDCA7LQ96GN5 454 aa14.21□□□□□ -0.13
CHGA-205ENST00000556098 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.13
CHGA-205ENST00000556098 RIC1Q4ADV7 1423 aa14.21□□□□□ -0.13
CHGA-205ENST00000556098 MAP2K2P36507 400 aa14.2□□□□□ -0.14
CHGA-205ENST00000556098 NFE2L2Q16236 605 aa14.2□□□□□ -0.14
CHGA-205ENST00000556098 PPP1R42Q7Z4L9 355 aa14.2□□□□□ -0.14
CHGA-205ENST00000556098 NLRP3Q96P20 1036 aa14.2□□□□□ -0.14
CHGA-205ENST00000556098 CXCL9Q07325 125 aa14.19□□□□□ -0.14
CHGA-205ENST00000556098 DPP8Q6V1X1 898 aaPredicted RBP14.19□□□□□ -0.14
CHGA-205ENST00000556098 SAPCD2Q86UD0 394 aa14.19□□□□□ -0.14
CHGA-205ENST00000556098 CRAMP1Q96RY5 1269 aa14.19□□□□□ -0.14
CHGA-205ENST00000556098 THUMPD2Q9BTF0 503 aaKnown RBP14.19□□□□□ -0.14
CHGA-205ENST00000556098 PPP4R2Q9NY27 417 aa14.19□□□□□ -0.14
CHGA-205ENST00000556098 SPEF2Q9C093 1822 aa14.19□□□□□ -0.14
CHGA-205ENST00000556098 ABCC4O15439 1325 aa14.18□□□□□ -0.14
CHGA-205ENST00000556098 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
CHGA-205ENST00000556098 NTSR2O95665 410 aa14.18□□□□□ -0.14
CHGA-205ENST00000556098 HOXA10P31260 410 aaPredicted RBP14.18□□□□□ -0.14
CHGA-205ENST00000556098 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
CHGA-205ENST00000556098 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
CHGA-205ENST00000556098 ZNRF3Q9ULT6 936 aa14.18□□□□□ -0.14
CHGA-205ENST00000556098 SHTN1A0MZ66 631 aa14.17□□□□□ -0.14
CHGA-205ENST00000556098 RGL2O15211 777 aa14.17□□□□□ -0.14
CHGA-205ENST00000556098 EIF2S2P20042 333 aaKnown RBP14.17□□□□□ -0.14
CHGA-205ENST00000556098 SOX10P56693 466 aa14.17□□□□□ -0.14
CHGA-205ENST00000556098 DLK2Q6UY11 383 aa14.17□□□□□ -0.14
CHGA-205ENST00000556098 USP48Q86UV5 1035 aa14.17□□□□□ -0.14
CHGA-205ENST00000556098 TRPM4Q8TD43 1214 aa14.17□□□□□ -0.14
CHGA-205ENST00000556098 CACNA1FO60840 1977 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 LRRC37AA6NMS7 1700 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 TNRC18O15417 2968 aaPredicted RBP14.16□□□□□ -0.14
CHGA-205ENST00000556098 CA12O43570 354 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 ANXA1P04083 346 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 BRPF1P55201 1214 aaPredicted RBP14.16□□□□□ -0.14
CHGA-205ENST00000556098 HUNKP57058 714 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 RIPK4P57078 832 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 MPNDQ8N594 471 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 NECTIN2Q92692 538 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 UTP14AQ9BVJ6 771 aaKnown RBP14.16□□□□□ -0.14
CHGA-205ENST00000556098 ATP6V0A2Q9Y487 856 aa14.16□□□□□ -0.14
CHGA-205ENST00000556098 IBTKQ9P2D0 1353 aaPredicted RBP14.16□□□□□ -0.14
CHGA-205ENST00000556098 HTATSF1O43719 755 aaKnown RBP14.15□□□□□ -0.14
CHGA-205ENST00000556098 RGS19P49795 217 aa14.15□□□□□ -0.14
CHGA-205ENST00000556098 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
CHGA-205ENST00000556098 TNIP1Q15025 636 aa14.15□□□□□ -0.14
CHGA-205ENST00000556098 RBM26Q5T8P6 1007 aaKnown RBP14.15□□□□□ -0.14
CHGA-205ENST00000556098 GIGYF2Q6Y7W6 1299 aaKnown RBP14.15□□□□□ -0.14
CHGA-205ENST00000556098 ZNF34Q8IZ26 560 aa14.15□□□□□ -0.14
CHGA-205ENST00000556098 ZIC5Q96T25 663 aa14.15□□□□□ -0.14
CHGA-205ENST00000556098 CNOT7Q9UIV1 285 aaKnown RBP14.15□□□□□ -0.14
CHGA-205ENST00000556098 TRIM35Q9UPQ4 493 aa14.15□□□□□ -0.14
CHGA-205ENST00000556098 H7C1D1 291 aa14.14□□□□□ -0.15
CHGA-205ENST00000556098 HCLS1P14317 486 aaPredicted RBP14.14□□□□□ -0.15
CHGA-205ENST00000556098 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
CHGA-205ENST00000556098 NEUROD2Q15784 382 aa14.14□□□□□ -0.15
CHGA-205ENST00000556098 TBC1D10BQ4KMP7 808 aaPredicted RBP14.14□□□□□ -0.15
CHGA-205ENST00000556098 CDC37L1Q7L3B6 337 aa14.14□□□□□ -0.15
CHGA-205ENST00000556098 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
CHGA-205ENST00000556098 ZBTB12Q9Y330 459 aaPredicted RBP14.14□□□□□ -0.15
CHGA-205ENST00000556098 SCN9AQ15858 1988 aa14.13□□□□□ -0.15
CHGA-205ENST00000556098 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
CHGA-205ENST00000556098 HIRAP54198 1017 aaPredicted RBP14.13□□□□□ -0.15
CHGA-205ENST00000556098 GNAI1P63096 354 aa14.13□□□□□ -0.15
CHGA-205ENST00000556098 PARP10Q53GL7 1025 aa14.13□□□□□ -0.15
CHGA-205ENST00000556098 DDX46Q7L014 1031 aaKnown RBP14.13□□□□□ -0.15
CHGA-205ENST00000556098 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
CHGA-205ENST00000556098 DUOX1Q9NRD9 1551 aa14.13□□□□□ -0.15
CHGA-205ENST00000556098 ADM5C9JUS6 153 aa14.12□□□□□ -0.15
CHGA-205ENST00000556098 NOGQ13253 232 aa14.12□□□□□ -0.15
CHGA-205ENST00000556098 AAMPQ13685 434 aa14.12□□□□□ -0.15
CHGA-205ENST00000556098 SAMD7Q7Z3H4 446 aa14.12□□□□□ -0.15
CHGA-205ENST00000556098 DBNDD1Q9H9R9 158 aa14.12□□□□□ -0.15
CHGA-205ENST00000556098 TSPYL4Q9UJ04 414 aa14.12□□□□□ -0.15
CHGA-205ENST00000556098 PSME4Q14997 1843 aa14.12□□□□□ -0.15
CHGA-205ENST00000556098 YDJCA8MPS7 323 aa14.11□□□□□ -0.15
CHGA-205ENST00000556098 MS4A1P11836 297 aa14.11□□□□□ -0.15
CHGA-205ENST00000556098 ZNF157P51786 506 aaPredicted RBP14.11□□□□□ -0.15
CHGA-205ENST00000556098 KIAA2012Q0VF49 1180 aa14.11□□□□□ -0.15
CHGA-205ENST00000556098 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms