RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
SIX1-205ENST00000555955 SFPQP23246 707 aaKnown RBP eCLIP17■□□□□ 0.31
SIX1-205ENST00000555955 PHACTR3Q96KR7 559 aa17■□□□□ 0.31
SIX1-205ENST00000555955 PRAM1Q96QH2 718 aa17■□□□□ 0.31
SIX1-205ENST00000555955 PARD6BQ9BYG5 372 aa17■□□□□ 0.31
SIX1-205ENST00000555955 NRDCO43847 1150 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 ZNF853P0CG23 659 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 ZRSR1Q15695 479 aaKnown RBP16.99■□□□□ 0.31
SIX1-205ENST00000555955 NFE2L2Q16236 605 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 LONRF2Q1L5Z9 754 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 EFCAB13Q8IY85 973 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 IMPACTQ9P2X3 320 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 MROH2AA6NES4 1674 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 CPP00450 1065 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 STX1AQ16623 288 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 SKIDA1Q1XH10 827 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 ARMCX5Q6P1M9 558 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
SIX1-205ENST00000555955 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 PLEKHA4Q9H4M7 779 aa16.99■□□□□ 0.31
SIX1-205ENST00000555955 NECAB1Q8N987 351 aa16.98■□□□□ 0.31
SIX1-205ENST00000555955 PGBD1Q96JS3 809 aa16.98■□□□□ 0.31
SIX1-205ENST00000555955 PDE11AQ9HCR9 933 aa16.98■□□□□ 0.31
SIX1-205ENST00000555955 TTC41PQ6P2S7 1318 aa16.98■□□□□ 0.31
SIX1-205ENST00000555955 MICALL1Q8N3F8 863 aa16.98■□□□□ 0.31
SIX1-205ENST00000555955 CCDC150Q8NCX0 1101 aa16.98■□□□□ 0.31
SIX1-205ENST00000555955 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
SIX1-205ENST00000555955 TRIM65Q6PJ69 517 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 TADA2BQ86TJ2 420 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
SIX1-205ENST00000555955 RNF217Q8TC41 542 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 SH2B1Q9NRF2 756 aaPredicted RBP16.97■□□□□ 0.31
SIX1-205ENST00000555955 A0A087WWV3 80 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 FANCGO15287 622 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 KCNJ6P48051 423 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 MNAT1P51948 309 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 MCM6Q14566 821 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
SIX1-205ENST00000555955 YTHDC2Q9H6S0 1430 aaKnown RBP16.97■□□□□ 0.31
SIX1-205ENST00000555955 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 CCDC196A0A1B0GTZ2 297 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 GOLIM4O00461 696 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 APOBRQ0VD83 1088 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 CCDC30Q5VVM6 783 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 TMC6Q7Z403 805 aa16.97■□□□□ 0.31
SIX1-205ENST00000555955 SRGAP3O43295 1099 aa16.96■□□□□ 0.31
SIX1-205ENST00000555955 IFIT2P09913 472 aaKnown RBP16.96■□□□□ 0.31
SIX1-205ENST00000555955 FAM43BQ6ZT52 329 aaPredicted RBP16.96■□□□□ 0.31
SIX1-205ENST00000555955 MAP2K7O14733 419 aa16.96■□□□□ 0.3
SIX1-205ENST00000555955 HMOX1P09601 288 aa16.96■□□□□ 0.3
SIX1-205ENST00000555955 ST3GAL1Q11201 340 aa16.96■□□□□ 0.3
SIX1-205ENST00000555955 ME3Q16798 604 aa16.96■□□□□ 0.3
SIX1-205ENST00000555955 LRRC31Q6UY01 552 aa16.96■□□□□ 0.3
SIX1-205ENST00000555955 CEP120Q8N960 986 aa16.96■□□□□ 0.3
SIX1-205ENST00000555955 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 CCDC189A1A4V9 331 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 IRF6O14896 467 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 CCP110O43303 1012 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 AOPEPQ8N6M6 819 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 A0A087WUV0 522 aaPredicted RBP16.95■□□□□ 0.3
SIX1-205ENST00000555955 NBPF6Q5VWK0 638 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 NBPF4Q96M43 638 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 FAN1Q9Y2M0 1017 aa16.95■□□□□ 0.3
SIX1-205ENST00000555955 SGSM2O43147 1006 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 PDCP20941 246 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 PPP2R5AQ15172 486 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 FAM177A1Q8N128 213 aaPredicted RBP16.94■□□□□ 0.3
SIX1-205ENST00000555955 AKAP2Q9Y2D5 859 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 LRRC7Q96NW7 1537 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 CCDC151A5D8V7 595 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 KIF3BO15066 747 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 MAP4K4O95819 1239 aaPredicted RBP16.94■□□□□ 0.3
SIX1-205ENST00000555955 VPS53Q5VIR6 699 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 RABGGTAQ92696 567 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 SGSM3Q96HU1 749 aa16.94■□□□□ 0.3
SIX1-205ENST00000555955 PIK3C2BO00750 1634 aa16.93■□□□□ 0.3
SIX1-205ENST00000555955 N4BP1O75113 896 aaKnown RBP16.93■□□□□ 0.3
SIX1-205ENST00000555955 PPP2R3AQ06190 1150 aa16.93■□□□□ 0.3
SIX1-205ENST00000555955 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
SIX1-205ENST00000555955 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
SIX1-205ENST00000555955 RSRC2Q7L4I2 434 aaKnown RBP16.93■□□□□ 0.3
SIX1-205ENST00000555955 JAKMIP1Q96N16 626 aaKnown RBP16.93■□□□□ 0.3
SIX1-205ENST00000555955 XPO4Q9C0E2 1151 aaKnown RBP16.93■□□□□ 0.3
SIX1-205ENST00000555955 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
SIX1-205ENST00000555955 ANO10Q9NW15 660 aa16.93■□□□□ 0.3
SIX1-205ENST00000555955 STAP2Q9UGK3 403 aa16.93■□□□□ 0.3
SIX1-205ENST00000555955 CLTCQ00610 1675 aaKnown RBP16.93■□□□□ 0.3
SIX1-205ENST00000555955 TMEM132EQ6IEE7 984 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 CEP57L1Q8IYX8 460 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 HSP90AB3PQ58FF7 597 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 PREX1Q8TCU6 1659 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 CTAGE5O15320 804 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 IFNKQ9P0W0 207 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
SIX1-205ENST00000555955 TUBGCP6Q96RT7 1819 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms