RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 EVA1CP58658 441 aa10.2□□□□□ -0.78
SUPT16H-204ENST00000555943 ZC3H6P61129 1189 aaKnown RBP10.2□□□□□ -0.78
SUPT16H-204ENST00000555943 SKOR1P84550 965 aa10.2□□□□□ -0.78
SUPT16H-204ENST00000555943 LIAT1Q6ZQX7 453 aa10.2□□□□□ -0.78
SUPT16H-204ENST00000555943 PARD3Q8TEW0 1356 aa10.2□□□□□ -0.78
SUPT16H-204ENST00000555943 MYBBP1AQ9BQG0 1328 aaKnown RBP10.2□□□□□ -0.78
SUPT16H-204ENST00000555943 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
SUPT16H-204ENST00000555943 OVOS2A0A0J9YW53 1432 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 OVOS2Q6IE36 1432 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 PPP2R1AP30153 589 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 AMPHP49418 695 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 ERFEQ4G0M1 354 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 FAM196AQ6ZSG2 479 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 CFAP53Q96M91 514 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 ARXQ96QS3 562 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 STRN4Q9NRL3 753 aa10.19□□□□□ -0.78
SUPT16H-204ENST00000555943 CAMTA1Q9Y6Y1 1673 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 SLIT3O75094 1523 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 FBLN1P23142 703 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 MTHFSP49914 203 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 RRS1Q15050 365 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 CHRNA2Q15822 529 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 C1QTNF2Q9BXJ5 285 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 PPP1R12CQ9BZL4 782 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 KIF20BQ96Q89 1820 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 PIK3C2AO00443 1686 aa10.18□□□□□ -0.78
SUPT16H-204ENST00000555943 AATKQ6ZMQ8 1374 aa10.17□□□□□ -0.78
SUPT16H-204ENST00000555943 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
SUPT16H-204ENST00000555943 WNT7BP56706 349 aa10.17□□□□□ -0.78
SUPT16H-204ENST00000555943 TCP11L2Q8N4U5 519 aa10.17□□□□□ -0.78
SUPT16H-204ENST00000555943 COL5A2P05997 1499 aaPredicted RBP10.17□□□□□ -0.78
SUPT16H-204ENST00000555943 PARP4Q9UKK3 1724 aaKnown RBP10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 PALM3A6NDB9 673 aaPredicted RBP10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 PIK3CDO00329 1044 aa10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 MCCD1P59942 119 aaPredicted RBP10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 PDE3BQ13370 1112 aa10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 DZIP3Q86Y13 1208 aaKnown RBP10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 CEP126Q9P2H0 1117 aa10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 POLKQ9UBT6 870 aa10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 EMILIN1Q9Y6C2 1016 aa10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 CRB1P82279 1406 aa10.16□□□□□ -0.78
SUPT16H-204ENST00000555943 MAP3K19Q56UN5 1328 aa10.15□□□□□ -0.78
SUPT16H-204ENST00000555943 CD2BP2O95400 341 aaKnown RBP10.15□□□□□ -0.78
SUPT16H-204ENST00000555943 TBC1D9Q6ZT07 1266 aa10.15□□□□□ -0.78
SUPT16H-204ENST00000555943 ARHGEF25Q86VW2 580 aa10.15□□□□□ -0.78
SUPT16H-204ENST00000555943 ZNF592Q92610 1267 aa10.15□□□□□ -0.78
SUPT16H-204ENST00000555943 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
SUPT16H-204ENST00000555943 TFIP11Q9UBB9 837 aaKnown RBP10.15□□□□□ -0.78
SUPT16H-204ENST00000555943 ABCC6O95255 1503 aa10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 CCER2I3L3R5 266 aa10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 SLC19A1P41440 591 aa10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 IP6K1Q92551 441 aa10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 USP35Q9P2H5 1018 aa10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 NUDCQ9Y266 331 aa10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 KIF24Q5T7B8 1368 aa10.14□□□□□ -0.79
SUPT16H-204ENST00000555943 ANKRD26Q9UPS8 1709 aa10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 DIAPH1O60610 1272 aaKnown RBP10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 HOXC9P31274 260 aa10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 HOMEZQ8IX15 550 aa10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 TRMT44Q8IYL2 757 aaKnown RBP10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 SLC10A4Q96EP9 437 aa10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 LTV1Q96GA3 475 aaPredicted RBP10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 CDCA7Q9BWT1 371 aaPredicted RBP10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 COL18A1P39060 1754 aa10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 FLT4P35916 1363 aa10.13□□□□□ -0.79
SUPT16H-204ENST00000555943 USP54Q70EL1 1684 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 ATP9BO43861 1147 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 TRIM37O94972 964 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 CSB-PGBD3P0DP91 1061 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 RFX1P22670 979 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 VARSP26640 1264 aaKnown RBP10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 HSP90AB2PQ58FF8 381 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 FAM182BQ5T319 152 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 PHTF2Q8N3S3 785 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 MAFBQ9Y5Q3 323 aaPredicted RBP10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 RTL1A6NKG5 1358 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 WNK3Q9BYP7 1800 aa10.12□□□□□ -0.79
SUPT16H-204ENST00000555943 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 WDR17Q8IZU2 1322 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 OVOS2A0A0G2JMS6 1433 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 SMG6Q86US8 1419 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 APBA3O96018 575 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 LMOD1P29536 600 aaPredicted RBP10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 R3HDM1Q15032 1099 aaKnown RBP10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 SLFNL1Q499Z3 407 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 NFATC2IPQ8NCF5 419 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 EHBP1Q8NDI1 1231 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 CAMKK2Q96RR4 588 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 RREB1Q92766 1687 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 NFAT5O94916 1531 aa10.11□□□□□ -0.79
SUPT16H-204ENST00000555943 U2SURPO15042 1029 aaKnown RBP10.1□□□□□ -0.79
SUPT16H-204ENST00000555943 SKIP12755 728 aa10.1□□□□□ -0.79
SUPT16H-204ENST00000555943 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
SUPT16H-204ENST00000555943 RNF135Q8IUD6 432 aa10.1□□□□□ -0.79
SUPT16H-204ENST00000555943 LRRC37A3O60309 1634 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms