RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 PNMA6AP0CW24 399 aaPredicted RBP9.11□□□□□ -0.95
CHD8-209ENST00000555935 CAPN2P17655 700 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 OS9Q13438 667 aaPredicted RBP9.11□□□□□ -0.95
CHD8-209ENST00000555935 MTX1Q13505 466 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 MUM1L1Q5H9M0 696 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 DHX40Q8IX18 779 aaKnown RBP9.11□□□□□ -0.95
CHD8-209ENST00000555935 SRRTQ9BXP5 876 aaKnown RBP9.11□□□□□ -0.95
CHD8-209ENST00000555935 CHMP4AQ9BY43 222 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 ST7Q9NRC1 585 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.11□□□□□ -0.952e-6■■□□□ 14.1
CHD8-209ENST00000555935 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 ADCY9O60503 1353 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 VGLL3A8MV65 326 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 ZRANB2O95218 330 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD8-209ENST00000555935 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD8-209ENST00000555935 HNRNPH2P55795 449 aaKnown RBP9.11□□□□□ -0.95
CHD8-209ENST00000555935 ERCC6LQ2NKX8 1250 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 ATL3Q6DD88 541 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 TMCO3Q6UWJ1 677 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 CCDC73Q6ZRK6 1079 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 PPP1R13BQ96KQ4 1090 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 A2ML1A8K2U0 1454 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 NALCNQ8IZF0 1738 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 GNAT3A8MTJ3 354 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 DTNBO60941 627 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 TOB2Q14106 344 aaPredicted RBP9.1□□□□□ -0.95
CHD8-209ENST00000555935 KRT32Q14532 448 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 E4F1Q66K89 784 aaPredicted RBP9.1□□□□□ -0.95
CHD8-209ENST00000555935 RCOR1Q9UKL0 485 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 IGSF1Q8N6C5 1336 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 FLT4P35916 1363 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 H3BQV1 296 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 KINO60870 393 aaKnown RBP9.1□□□□□ -0.95
CHD8-209ENST00000555935 RAPGEF3O95398 923 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 IFIT2P09913 472 aaKnown RBP9.1□□□□□ -0.95
CHD8-209ENST00000555935 PLA2G4AP47712 749 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 ARHGAP29Q52LW3 1261 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 HDGFL1Q5TGJ6 251 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 GTF3C6Q969F1 213 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 HDAC5Q9UQL6 1122 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 PHLPP2Q6ZVD8 1323 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 NCKAP5LQ9HCH0 1330 aa9.1□□□□□ -0.95
CHD8-209ENST00000555935 SBNO1A3KN83 1393 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 JCADQ9P266 1359 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 GPS2Q13227 327 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 CCAR1Q8IX12 1150 aaKnown RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 BRF1Q92994 677 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 NPHP4O75161 1426 aaPredicted RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 PRR36Q9H6K5 1346 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 NBPF7P0C2Y1 421 aaPredicted RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 SFPQP23246 707 aaKnown RBP eCLIP9.09□□□□□ -0.95
CHD8-209ENST00000555935 FAM160A1Q05DH4 1040 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 NMIQ13287 307 aaPredicted RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 TAF7Q15545 349 aaPredicted RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 FBXO31Q5XUX0 539 aaPredicted RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 NAA16Q6N069 864 aaPredicted RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 SYT10Q6XYQ8 523 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 DDX54Q8TDD1 881 aaKnown RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 UBXN4Q92575 508 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 BPIFA3Q9BQP9 254 aa9.09□□□□□ -0.95
CHD8-209ENST00000555935 LLPHQ9BRT6 129 aaKnown RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 FEZ2Q9UHY8 353 aaPredicted RBP9.09□□□□□ -0.95
CHD8-209ENST00000555935 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 USP6P35125 1406 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 RAD51AP2Q09MP3 1159 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 BEND3Q5T5X7 828 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 NBPF11Q86T75 865 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 AOPEPQ8N6M6 819 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
CHD8-209ENST00000555935 ORC3Q9UBD5 711 aaPredicted RBP9.08□□□□□ -0.96
CHD8-209ENST00000555935 MED23Q9ULK4 1368 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 HOXB7P09629 217 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 ETF1P62495 437 aaKnown RBP9.08□□□□□ -0.96
CHD8-209ENST00000555935 TXNDC2Q86VQ3 553 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 ENGASEQ8NFI3 743 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 DNAAF4Q8WXU2 420 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 FAM227BQ96M60 508 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 ZNF396Q96N95 335 aaPredicted RBP9.08□□□□□ -0.96
CHD8-209ENST00000555935 UBXN6Q9BZV1 441 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 METP08581 1390 aa9.08□□□□□ -0.96
CHD8-209ENST00000555935 EFCAB8A8MWE9 144 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 NPHP1O15259 732 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 ADD1P35611 737 aaKnown RBP9.07□□□□□ -0.96
CHD8-209ENST00000555935 CCDC158Q5M9N0 1113 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 MNS1Q8NEH6 495 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 PHAXQ9H814 394 aaKnown RBP9.07□□□□□ -0.96
CHD8-209ENST00000555935 JAK2O60674 1132 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 STK3Q13188 491 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 EYA1Q99502 592 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 TRIM34Q9BYJ4 488 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 GOLPH3LQ9H4A5 285 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 ACEP12821 1306 aa9.07□□□□□ -0.96
CHD8-209ENST00000555935 TADA3O75528 432 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 USPL1Q5W0Q7 1092 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 ARMCX5Q6P1M9 558 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 AACSQ86V21 672 aa9.06□□□□□ -0.96
CHD8-209ENST00000555935 HOMER1Q86YM7 354 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms