RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 MLLT1Q03111 559 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-214ENST00000555867 CALD1Q05682 793 aaKnown RBP8.32□□□□□ -1.08
PSEN1-214ENST00000555867 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
PSEN1-214ENST00000555867 COG3Q96JB2 828 aa8.32□□□□□ -1.08
PSEN1-214ENST00000555867 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-214ENST00000555867 DLG5Q8TDM6 1919 aa8.31□□□□□ -1.08
PSEN1-214ENST00000555867 VEGFAP15692 232 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-214ENST00000555867 CTCFP49711 727 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-214ENST00000555867 ITPK1Q13572 414 aa8.31□□□□□ -1.08
PSEN1-214ENST00000555867 CENPQQ7L2Z9 268 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-214ENST00000555867 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
PSEN1-214ENST00000555867 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
PSEN1-214ENST00000555867 U2SURPO15042 1029 aaKnown RBP8.3□□□□□ -1.08
PSEN1-214ENST00000555867 GNPATO15228 680 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 SLC4A3P48751 1232 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 RASSF7Q02833 373 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 LMOD3Q0VAK6 560 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 SWT1Q5T5J6 900 aaKnown RBP8.3□□□□□ -1.08
PSEN1-214ENST00000555867 USHBP1Q8N6Y0 703 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 PIGBQ92521 554 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 PLEKHF1Q96S99 279 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 CRBNQ96SW2 442 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 ITGB4P16144 1822 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 CCDC88AQ3V6T2 1871 aa8.3□□□□□ -1.08
PSEN1-214ENST00000555867 LOC102724428A0A0B4J2F2 783 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 GLTPD2A6NH11 291 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 CYP27B1O15528 508 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 CANXP27824 592 aaKnown RBP8.29□□□□□ -1.08
PSEN1-214ENST00000555867 TMPOP42166 694 aaKnown RBP8.29□□□□□ -1.08
PSEN1-214ENST00000555867 SIK1P57059 783 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 NBPF6Q5VWK0 638 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 NKX2-3Q8TAU0 364 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 NBPF4Q96M43 638 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 TMUB1Q9BVT8 246 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 POLKQ9UBT6 870 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 PDZRN3Q9UPQ7 1066 aa8.29□□□□□ -1.08
PSEN1-214ENST00000555867 CNTNAP1P78357 1384 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 KIF24Q5T7B8 1368 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 CCDC85CA6NKD9 419 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 PLIN1O60240 522 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 HSPA8P11142 646 aaKnown RBP8.28□□□□□ -1.08
PSEN1-214ENST00000555867 HMGB2P26583 209 aaKnown RBP8.28□□□□□ -1.08
PSEN1-214ENST00000555867 CHRNA5P30532 468 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 HOXC9P31274 260 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 VEGFBP49765 207 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 COPS2P61201 443 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 DALRD3Q5D0E6 543 aaKnown RBP8.28□□□□□ -1.08
PSEN1-214ENST00000555867 PADI6Q6TGC4 694 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 SMARCC1Q92922 1105 aaPredicted RBP8.28□□□□□ -1.08
PSEN1-214ENST00000555867 CCDC87Q9NVE4 849 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 MAP3K19Q56UN5 1328 aa8.28□□□□□ -1.08
PSEN1-214ENST00000555867 GYS1P13807 737 aa8.27□□□□□ -1.09
PSEN1-214ENST00000555867 RARSP54136 660 aaKnown RBP8.27□□□□□ -1.09
PSEN1-214ENST00000555867 NEUROD2Q15784 382 aa8.27□□□□□ -1.09
PSEN1-214ENST00000555867 NLGN1Q8N2Q7 840 aa8.27□□□□□ -1.09
PSEN1-214ENST00000555867 PRR14Q9BWN1 585 aa8.27□□□□□ -1.09
PSEN1-214ENST00000555867 ASAP1Q9ULH1 1129 aa8.27□□□□□ -1.09
PSEN1-214ENST00000555867 KDM6AO15550 1401 aaPredicted RBP8.27□□□□□ -1.09
PSEN1-214ENST00000555867 KIF16BQ96L93 1317 aa8.27□□□□□ -1.09
PSEN1-214ENST00000555867 C4AP0C0L4 1744 aa8.26□□□□□ -1.09
PSEN1-214ENST00000555867 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
PSEN1-214ENST00000555867 ARHGEF1Q92888 912 aaKnown RBP8.26□□□□□ -1.09
PSEN1-214ENST00000555867 AIDAQ96BJ3 306 aa8.26□□□□□ -1.09
PSEN1-214ENST00000555867 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
PSEN1-214ENST00000555867 NPDC1Q9NQX5 325 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-214ENST00000555867 RRP7AQ9Y3A4 280 aaKnown RBP8.26□□□□□ -1.09
PSEN1-214ENST00000555867 MYH14Q7Z406 1995 aaKnown RBP8.26□□□□□ -1.09
PSEN1-214ENST00000555867 ZPR1O75312 459 aa8.25□□□□□ -1.09
PSEN1-214ENST00000555867 ATP6V1AP38606 617 aa8.25□□□□□ -1.09
PSEN1-214ENST00000555867 ANP32AP39687 249 aaKnown RBP8.25□□□□□ -1.09
PSEN1-214ENST00000555867 RIPK4P57078 832 aa8.25□□□□□ -1.09
PSEN1-214ENST00000555867 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
PSEN1-214ENST00000555867 SLC4A9Q96Q91 983 aa8.25□□□□□ -1.09
PSEN1-214ENST00000555867 CHMP4BQ9H444 224 aaKnown RBP8.25□□□□□ -1.09
PSEN1-214ENST00000555867 PARP3Q9Y6F1 533 aa8.25□□□□□ -1.09
PSEN1-214ENST00000555867 ZC3H4Q9UPT8 1303 aaKnown RBP8.25□□□□□ -1.09
PSEN1-214ENST00000555867 BCAR3O75815 825 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 TATP17735 454 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-214ENST00000555867 LMNB1P20700 586 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 PRKAR2BP31323 418 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 IL13P35225 146 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 AMPHP49418 695 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 BRPF1P55201 1214 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-214ENST00000555867 GNAI1P63096 354 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 DDR1Q08345 913 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 ALDH1L2Q3SY69 923 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 C20orf194Q5TEA3 1177 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 ZKSCAN2Q63HK3 967 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 ZNF787Q6DD87 383 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 RAPGEF4Q8WZA2 1011 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 CLUAP1Q96AJ1 413 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 RTCBQ9Y3I0 505 aaKnown RBP8.24□□□□□ -1.09
PSEN1-214ENST00000555867 CACNA1FO60840 1977 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 CASP8AP2Q9UKL3 1982 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 PASKQ96RG2 1323 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 PCDH11XQ9BZA7 1347 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 PCDH11YQ9BZA8 1340 aa8.24□□□□□ -1.09
PSEN1-214ENST00000555867 FLT4P35916 1363 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms