RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	CPNE3	O75131	537 aa	Known RBP	7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	PPFIA3	O75145	1194 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	SASH3	O75995	380 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	ALG1L	Q6GMV1	187 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	KRT25	Q7Z3Z0	450 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	NLRP13	Q86W25	1043 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	GMCL1	Q96IK5	515 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	GSX2	Q9BZM3	304 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	DNAJC25	Q9H1X3	360 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	CNTN3	Q9P232	1028 aa		7.8	□□□□□ -1.16
KTN1-223	ENST00000555573	PHACTR2	O75167	634 aa		7.79	□□□□□ -1.16
KTN1-223	ENST00000555573	TARS	P26639	723 aa	Known RBP	7.79	□□□□□ -1.16
KTN1-223	ENST00000555573	LAMC2	Q13753	1193 aa		7.79	□□□□□ -1.16
KTN1-223	ENST00000555573	CCIN	Q13939	588 aa		7.79	□□□□□ -1.16
KTN1-223	ENST00000555573	CHRD	Q9H2X0	955 aa		7.79	□□□□□ -1.16
KTN1-223	ENST00000555573	ZFYVE28	Q9HCC9	887 aa		7.79	□□□□□ -1.16
KTN1-223	ENST00000555573	ABI2	Q9NYB9	513 aa	Predicted RBP	7.79	□□□□□ -1.16
KTN1-223	ENST00000555573	CD33	P20138	364 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	FGD1	P98174	961 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	C1orf127	Q8N9H9	656 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	MARK1	Q9P0L2	795 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	CDC14C	A4D256	554 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	GPR25	O00155	361 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	POLR3D	P05423	398 aa	Predicted RBP	7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	XPC	Q01831	940 aa	Predicted RBP	7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	SPEM2	Q0P670	501 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	RAB44	Q7Z6P3	723 aa	Predicted RBP	7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	SLC30A3	Q99726	388 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	ZFAT	Q9P243	1243 aa		7.78	□□□□□ -1.16
KTN1-223	ENST00000555573	EREG	O14944	169 aa		7.77	□□□□□ -1.17
KTN1-223	ENST00000555573	VAMP1	P23763	118 aa		7.77	□□□□□ -1.17
KTN1-223	ENST00000555573	MRPL58	Q14197	206 aa	Known RBP	7.77	□□□□□ -1.17
KTN1-223	ENST00000555573	VWA5B2	Q8N398	1253 aa		7.77	□□□□□ -1.17
KTN1-223	ENST00000555573	FBF1	Q8TES7	1133 aa		7.77	□□□□□ -1.17
KTN1-223	ENST00000555573	MMP20	O60882	483 aa		7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	CYP2E1	P05181	493 aa	Predicted RBP	7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	RARA	P10276	462 aa		7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	NFKB1	P19838	968 aa		7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	IRS1	P35568	1242 aa		7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	DAB2	P98082	770 aa		7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	PI16	Q6UXB8	463 aa		7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	CCDC74A	Q96AQ1	378 aa		7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	7.76	□□□□□ -1.17
KTN1-223	ENST00000555573	RECK	O95980	971 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	FGFR3	P22607	806 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	PSMD2	Q13200	908 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	TMC4	Q7Z404	712 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	EPS8L3	Q8TE67	593 aa	Known RBP	7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	PNMA5	Q96PV4	448 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	CES1	P23141	567 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	GNA15	P30679	374 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	CTBS	Q01459	385 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	BHMT	Q93088	406 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	TRERF1	Q96PN7	1200 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	BCL11A	Q9H165	835 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	NPHS2	Q9NP85	383 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	IGSF5	Q9NSI5	407 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	KANSL3	Q9P2N6	904 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	PHF24	Q9UPV7	400 aa		7.75	□□□□□ -1.17
KTN1-223	ENST00000555573	FOXR1	Q6PIV2	292 aa		7.74	□□□□□ -1.17
KTN1-223	ENST00000555573	SV2A	Q7L0J3	742 aa		7.74	□□□□□ -1.17
KTN1-223	ENST00000555573	OR13H1	Q8NG92	308 aa		7.74	□□□□□ -1.17
KTN1-223	ENST00000555573	NANOS1	Q8WY41	292 aa	Known RBP	7.74	□□□□□ -1.17
KTN1-223	ENST00000555573	BACH2	Q9BYV9	841 aa		7.74	□□□□□ -1.17
KTN1-223	ENST00000555573	MRS2	Q9HD23	443 aa		7.74	□□□□□ -1.17
KTN1-223	ENST00000555573	SORBS3	O60504	671 aa		7.73	□□□□□ -1.17
KTN1-223	ENST00000555573	TSNAXIP1	Q2TAA8	658 aa		7.73	□□□□□ -1.17
KTN1-223	ENST00000555573	FAM182B	Q5T319	152 aa		7.73	□□□□□ -1.17
KTN1-223	ENST00000555573	VEGFB	P49765	207 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	GALNT12	Q8IXK2	581 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	PMEPA1	Q969W9	287 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	VTI1B	Q9UEU0	232 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	LDLRAD1	Q5T700	205 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	NLRP2	Q9NX02	1062 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	TLR7	Q9NYK1	1049 aa	Known RBP	7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	STK17A	Q9UEE5	414 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	SPG7	Q9UQ90	795 aa		7.72	□□□□□ -1.17
KTN1-223	ENST00000555573	PHF20L1	A8MW92	1017 aa		7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	C2CD2L	O14523	706 aa		7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	MAP3K6	O95382	1288 aa		7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	COL13A1	Q5TAT6	717 aa	Predicted RBP	7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	OSBPL7	Q9BZF2	842 aa		7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	EFCC1	Q9HA90	598 aa		7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	LATS2	Q9NRM7	1088 aa		7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	AK5	Q9Y6K8	562 aa		7.71	□□□□□ -1.18
KTN1-223	ENST00000555573	PSAP	P07602	524 aa		7.7	□□□□□ -1.18
KTN1-223	ENST00000555573	DHX32	Q7L7V1	743 aa	Known RBP	7.7	□□□□□ -1.18
KTN1-223	ENST00000555573	FRMD6	Q96NE9	622 aa		7.7	□□□□□ -1.18
KTN1-223	ENST00000555573	NXF1	Q9UBU9	619 aa	Known RBP	7.7	□□□□□ -1.18
KTN1-223	ENST00000555573	SALL4	Q9UJQ4	1053 aa		7.7	□□□□□ -1.18
KTN1-223	ENST00000555573	TCF3	P15923	654 aa		7.69	□□□□□ -1.18
KTN1-223	ENST00000555573	SOX18	P35713	384 aa		7.69	□□□□□ -1.18
KTN1-223	ENST00000555573	GAS6	Q14393	721 aa		7.69	□□□□□ -1.18
KTN1-223	ENST00000555573	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.69	□□□□□ -1.18
KTN1-223	ENST00000555573	PRR12	Q9ULL5	1215 aa		7.69	□□□□□ -1.18
KTN1-223	ENST00000555573	GADD45B	O75293	160 aa	Predicted RBP	7.69	□□□□□ -1.18

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