RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 NGEFQ8N5V2 710 aa14.25□□□□□ -0.13
TDP1-212ENST00000555565 ZNF408Q9H9D4 720 aa14.25□□□□□ -0.13
TDP1-212ENST00000555565 NUP98P52948 1817 aa14.25□□□□□ -0.13
TDP1-212ENST00000555565 CDHR2Q9BYE9 1310 aa14.24□□□□□ -0.13
TDP1-212ENST00000555565 YDJCA8MPS7 323 aa14.24□□□□□ -0.13
TDP1-212ENST00000555565 HUNKP57058 714 aa14.24□□□□□ -0.13
TDP1-212ENST00000555565 USP48Q86UV5 1035 aa14.24□□□□□ -0.13
TDP1-212ENST00000555565 RAD17O75943 681 aa14.23□□□□□ -0.13
TDP1-212ENST00000555565 KIAA2012Q0VF49 1180 aa14.23□□□□□ -0.13
TDP1-212ENST00000555565 SAGE1Q9NXZ1 904 aa14.23□□□□□ -0.13
TDP1-212ENST00000555565 CNOT7Q9UIV1 285 aaKnown RBP14.23□□□□□ -0.13
TDP1-212ENST00000555565 ABCC4O15439 1325 aa14.22□□□□□ -0.13
TDP1-212ENST00000555565 MYBBP1AQ9BQG0 1328 aaKnown RBP14.22□□□□□ -0.13
TDP1-212ENST00000555565 RIPK4P57078 832 aa14.22□□□□□ -0.13
TDP1-212ENST00000555565 KIF23Q02241 960 aaPredicted RBP14.22□□□□□ -0.13
TDP1-212ENST00000555565 PRPF38BQ5VTL8 546 aaKnown RBP14.22□□□□□ -0.13
TDP1-212ENST00000555565 RGMBQ6NW40 437 aa14.22□□□□□ -0.13
TDP1-212ENST00000555565 SP8Q8IXZ3 490 aa14.22□□□□□ -0.13
TDP1-212ENST00000555565 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
TDP1-212ENST00000555565 RNF186Q9NXI6 227 aa14.22□□□□□ -0.13
TDP1-212ENST00000555565 RRP7AQ9Y3A4 280 aaKnown RBP14.22□□□□□ -0.13
TDP1-212ENST00000555565 EGFRP00533 1210 aa14.21□□□□□ -0.13
TDP1-212ENST00000555565 TMPOP42166 694 aaKnown RBP14.21□□□□□ -0.13
TDP1-212ENST00000555565 GIGYF2Q6Y7W6 1299 aaKnown RBP14.21□□□□□ -0.13
TDP1-212ENST00000555565 LRP10Q7Z4F1 713 aa14.21□□□□□ -0.13
TDP1-212ENST00000555565 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
TDP1-212ENST00000555565 NLRP3Q96P20 1036 aa14.21□□□□□ -0.13
TDP1-212ENST00000555565 TRPA1O75762 1119 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 BBOX1O75936 387 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 TNIP1Q15025 636 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 KIF6Q6ZMV9 814 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 SAMD7Q7Z3H4 446 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 CSRNP1Q96S65 589 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 BCL2L13Q9BXK5 485 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 TSPYL4Q9UJ04 414 aa14.2□□□□□ -0.14
TDP1-212ENST00000555565 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
TDP1-212ENST00000555565 MYL6BP14649 208 aa14.19□□□□□ -0.14
TDP1-212ENST00000555565 DPP8Q6V1X1 898 aaPredicted RBP14.19□□□□□ -0.14
TDP1-212ENST00000555565 MICALL2Q8IY33 904 aa14.19□□□□□ -0.14
TDP1-212ENST00000555565 MPNDQ8N594 471 aa14.19□□□□□ -0.14
TDP1-212ENST00000555565 DPF2Q92785 391 aa14.19□□□□□ -0.14
TDP1-212ENST00000555565 CCDC102AQ96A19 550 aa14.19□□□□□ -0.14
TDP1-212ENST00000555565 GBA2Q9HCG7 927 aaPredicted RBP14.19□□□□□ -0.14
TDP1-212ENST00000555565 H7C1D1 291 aa14.18□□□□□ -0.14
TDP1-212ENST00000555565 PPP1R42Q7Z4L9 355 aa14.18□□□□□ -0.14
TDP1-212ENST00000555565 CCDC146Q8IYE0 955 aa14.18□□□□□ -0.14
TDP1-212ENST00000555565 DUOX1Q9NRD9 1551 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 ADM5C9JUS6 153 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 LMOD3Q0VAK6 560 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 PDIA6Q15084 440 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 PARP10Q53GL7 1025 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 KRT26Q7Z3Y9 468 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 TMX4Q9H1E5 349 aaPredicted RBP14.17□□□□□ -0.14
TDP1-212ENST00000555565 BABAM1Q9NWV8 329 aa14.17□□□□□ -0.14
TDP1-212ENST00000555565 PSMD14O00487 310 aa14.16□□□□□ -0.14
TDP1-212ENST00000555565 SLC10A3P09131 477 aa14.16□□□□□ -0.14
TDP1-212ENST00000555565 ZNF157P51786 506 aaPredicted RBP14.16□□□□□ -0.14
TDP1-212ENST00000555565 NEUROD2Q15784 382 aa14.16□□□□□ -0.14
TDP1-212ENST00000555565 CTU1Q7Z7A3 348 aaKnown RBP14.16□□□□□ -0.14
TDP1-212ENST00000555565 C2orf69Q8N8R5 385 aa14.16□□□□□ -0.14
TDP1-212ENST00000555565 RUNDC1Q96C34 613 aa14.16□□□□□ -0.14
TDP1-212ENST00000555565 UTP14AQ9BVJ6 771 aaKnown RBP14.16□□□□□ -0.14
TDP1-212ENST00000555565 KCNQ5Q9NR82 932 aa14.16□□□□□ -0.14
TDP1-212ENST00000555565 EIF2S2P20042 333 aaKnown RBP14.15□□□□□ -0.14
TDP1-212ENST00000555565 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
TDP1-212ENST00000555565 TBC1D10BQ4KMP7 808 aaPredicted RBP14.15□□□□□ -0.14
TDP1-212ENST00000555565 PRKRIP1Q9H875 184 aaPredicted RBP14.15□□□□□ -0.14
TDP1-212ENST00000555565 ADAMTS8Q9UP79 889 aa14.15□□□□□ -0.14
TDP1-212ENST00000555565 TRIM35Q9UPQ4 493 aa14.15□□□□□ -0.14
TDP1-212ENST00000555565 HPS5Q9UPZ3 1129 aa14.15□□□□□ -0.14
TDP1-212ENST00000555565 CHL1O00533 1208 aa14.14□□□□□ -0.15
TDP1-212ENST00000555565 HCLS1P14317 486 aaPredicted RBP14.14□□□□□ -0.15
TDP1-212ENST00000555565 GRAPQ13588 217 aa14.14□□□□□ -0.15
TDP1-212ENST00000555565 PROSER3Q2NL68 480 aa14.14□□□□□ -0.15
TDP1-212ENST00000555565 GRAPLQ8TC17 118 aaPredicted RBP14.14□□□□□ -0.15
TDP1-212ENST00000555565 POLR2AP24928 1970 aaKnown RBP14.14□□□□□ -0.15
TDP1-212ENST00000555565 RTL9Q8NET4 1388 aa14.13□□□□□ -0.15
TDP1-212ENST00000555565 ANXA1P04083 346 aa14.13□□□□□ -0.15
TDP1-212ENST00000555565 KRT24Q2M2I5 525 aa14.13□□□□□ -0.15
TDP1-212ENST00000555565 NLRP10Q86W26 655 aa14.13□□□□□ -0.15
TDP1-212ENST00000555565 ASTN2O75129 1339 aaPredicted RBP14.13□□□□□ -0.15
TDP1-212ENST00000555565 LAMB2P55268 1798 aa14.12□□□□□ -0.15
TDP1-212ENST00000555565 NECTIN2Q92692 538 aa14.12□□□□□ -0.15
TDP1-212ENST00000555565 DBNDD1Q9H9R9 158 aa14.12□□□□□ -0.15
TDP1-212ENST00000555565 POLLQ9UGP5 575 aa14.12□□□□□ -0.15
TDP1-212ENST00000555565 MKI67P46013 3256 aaKnown RBP14.12□□□□□ -0.15
TDP1-212ENST00000555565 ANKRD36CQ5JPF3 1778 aa14.11□□□□□ -0.15
TDP1-212ENST00000555565 TAF1P21675 1872 aa14.11□□□□□ -0.15
TDP1-212ENST00000555565 RPS12P25398 132 aaKnown RBP14.11□□□□□ -0.15
TDP1-212ENST00000555565 WASHC4Q2M389 1173 aa14.11□□□□□ -0.15
TDP1-212ENST00000555565 RBM26Q5T8P6 1007 aaKnown RBP14.11□□□□□ -0.15
TDP1-212ENST00000555565 DDX46Q7L014 1031 aaKnown RBP14.11□□□□□ -0.15
TDP1-212ENST00000555565 RASAL3Q86YV0 1011 aa14.11□□□□□ -0.15
TDP1-212ENST00000555565 DCPSQ96C86 337 aaKnown RBP14.11□□□□□ -0.15
TDP1-212ENST00000555565 LRRC37AA6NMS7 1700 aa14.1□□□□□ -0.15
TDP1-212ENST00000555565 AKAP11Q9UKA4 1901 aa14.1□□□□□ -0.15
TDP1-212ENST00000555565 REM2Q8IYK8 340 aaPredicted RBP14.1□□□□□ -0.15
TDP1-212ENST00000555565 ZNF296Q8WUU4 475 aaPredicted RBP14.1□□□□□ -0.15
TDP1-212ENST00000555565 CDCA5Q96FF9 252 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms