RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 NBPF6Q5VWK0 638 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 AIDAQ96BJ3 306 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 NBPF4Q96M43 638 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 RSRP1Q9BUV0 290 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 SUV39H2Q9H5I1 410 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 ZFAND3Q9H8U3 227 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 KBTBD4Q9NVX7 518 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 TMEM63CQ9P1W3 806 aa9.78□□□□□ -0.84
PAX3-210ENST00000555548 GADD45BO75293 160 aaPredicted RBP9.77□□□□□ -0.85
PAX3-210ENST00000555548 JAZF1Q86VZ6 243 aa9.77□□□□□ -0.85
PAX3-210ENST00000555548 CKAP2LQ8IYA6 745 aa9.77□□□□□ -0.85
PAX3-210ENST00000555548 CMTR1Q8N1G2 835 aaKnown RBP9.77□□□□□ -0.85
PAX3-210ENST00000555548 SPATA31C2B4DYI2 1134 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 POLR3DP05423 398 aaPredicted RBP9.76□□□□□ -0.85
PAX3-210ENST00000555548 GSTT1P30711 240 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 SLC19A1P41440 591 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 WDR4P57081 412 aaKnown RBP9.76□□□□□ -0.85
PAX3-210ENST00000555548 SERINC3Q13530 473 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 BTLAQ7Z6A9 289 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 SPON2Q9BUD6 331 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 CHRDQ9H2X0 955 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 NEUROD4Q9HD90 331 aa9.76□□□□□ -0.85
PAX3-210ENST00000555548 GRM2Q14416 872 aa9.75□□□□□ -0.85
PAX3-210ENST00000555548 TCEAL1Q15170 157 aa9.75□□□□□ -0.85
PAX3-210ENST00000555548 SPACA7Q96KW9 195 aa9.75□□□□□ -0.85
PAX3-210ENST00000555548 HCSTQ9UBK5 93 aa9.75□□□□□ -0.85
PAX3-210ENST00000555548 TIMP2P16035 220 aa9.74□□□□□ -0.85
PAX3-210ENST00000555548 PWP1Q13610 501 aa9.74□□□□□ -0.85
PAX3-210ENST00000555548 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
PAX3-210ENST00000555548 KIAA0825Q8IV33 1275 aa9.74□□□□□ -0.85
PAX3-210ENST00000555548 MEIOBQ8N635 442 aa9.74□□□□□ -0.85
PAX3-210ENST00000555548 MRFAP1L1Q96HT8 127 aa9.74□□□□□ -0.85
PAX3-210ENST00000555548 ADAMTS1Q9UHI8 967 aa9.74□□□□□ -0.85
PAX3-210ENST00000555548 EREGO14944 169 aa9.73□□□□□ -0.85
PAX3-210ENST00000555548 ATP4AP20648 1035 aa9.73□□□□□ -0.85
PAX3-210ENST00000555548 GRNP28799 593 aaKnown RBP9.73□□□□□ -0.85
PAX3-210ENST00000555548 C1orf127Q8N9H9 656 aa9.73□□□□□ -0.85
PAX3-210ENST00000555548 C3orf58Q8NDZ4 430 aa9.73□□□□□ -0.85
PAX3-210ENST00000555548 MKL1Q969V6 931 aa9.73□□□□□ -0.85
PAX3-210ENST00000555548 PMEPA1Q969W9 287 aa9.73□□□□□ -0.85
PAX3-210ENST00000555548 TTF2Q9UNY4 1162 aaKnown RBP9.73□□□□□ -0.85
PAX3-210ENST00000555548 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
PAX3-210ENST00000555548 SSBP05455 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
PAX3-210ENST00000555548 XRCC5P13010 732 aaKnown RBP9.72□□□□□ -0.85
PAX3-210ENST00000555548 HSD3B2P26439 372 aa9.72□□□□□ -0.85
PAX3-210ENST00000555548 PHKA2P46019 1235 aa9.72□□□□□ -0.85
PAX3-210ENST00000555548 NFX1Q12986 1120 aaKnown RBP9.72□□□□□ -0.85
PAX3-210ENST00000555548 KIAA0319Q5VV43 1072 aa9.72□□□□□ -0.85
PAX3-210ENST00000555548 SNIP1Q8TAD8 396 aaKnown RBP9.72□□□□□ -0.85
PAX3-210ENST00000555548 ANKRD24Q8TF21 1146 aa9.72□□□□□ -0.85
PAX3-210ENST00000555548 ZIC5Q96T25 663 aa9.72□□□□□ -0.85
PAX3-210ENST00000555548 PPP4R2Q9NY27 417 aa9.72□□□□□ -0.85
PAX3-210ENST00000555548 CNTN3Q9P232 1028 aa9.72□□□□□ -0.85
PAX3-210ENST00000555548 XYLBO75191 536 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 EGFRP00533 1210 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 EPB42P16452 691 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 VEGFBP49765 207 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 RELL1Q8IUW5 271 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 GLIS3Q8NEA6 775 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 INSM2Q96T92 566 aaPredicted RBP9.71□□□□□ -0.86
PAX3-210ENST00000555548 C11orf16Q9NQ32 467 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 ABI2Q9NYB9 513 aaPredicted RBP9.71□□□□□ -0.86
PAX3-210ENST00000555548 TRAK1Q9UPV9 953 aa9.71□□□□□ -0.86
PAX3-210ENST00000555548 MRPL42Q9Y6G3 142 aaKnown RBP9.71□□□□□ -0.86
PAX3-210ENST00000555548 MAP3K10Q02779 954 aa9.7□□□□□ -0.86
PAX3-210ENST00000555548 WDR44Q5JSH3 913 aa9.7□□□□□ -0.86
PAX3-210ENST00000555548 LRRC69Q6ZNQ3 347 aa9.7□□□□□ -0.86
PAX3-210ENST00000555548 TMEM74Q96NL1 305 aa9.7□□□□□ -0.86
PAX3-210ENST00000555548 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
PAX3-210ENST00000555548 ZNF408Q9H9D4 720 aa9.7□□□□□ -0.86
PAX3-210ENST00000555548 PKD2L1Q9P0L9 805 aa9.7□□□□□ -0.86
PAX3-210ENST00000555548 SPINT1O43278 529 aa9.69□□□□□ -0.86
PAX3-210ENST00000555548 NASPP49321 788 aaPredicted RBP9.69□□□□□ -0.86
PAX3-210ENST00000555548 TYRO3Q06418 890 aa9.69□□□□□ -0.86
PAX3-210ENST00000555548 CCDC85BQ15834 202 aaPredicted RBP9.69□□□□□ -0.86
PAX3-210ENST00000555548 NLRP13Q86W25 1043 aa9.69□□□□□ -0.86
PAX3-210ENST00000555548 GPATCH3Q96I76 525 aa9.69□□□□□ -0.86
PAX3-210ENST00000555548 STRIP2Q9ULQ0 834 aa9.69□□□□□ -0.86
PAX3-210ENST00000555548 PPM1HQ9ULR3 514 aa9.69□□□□□ -0.86
PAX3-210ENST00000555548 EFR3BQ9Y2G0 817 aa9.69□□□□□ -0.86
PAX3-210ENST00000555548 A0A1W2PP55 124 aa9.68□□□□□ -0.86
PAX3-210ENST00000555548 CLSTN1O94985 981 aa9.68□□□□□ -0.86
PAX3-210ENST00000555548 CES1P23141 567 aa9.68□□□□□ -0.86
PAX3-210ENST00000555548 EIF4A3P38919 411 aaKnown RBP9.68□□□□□ -0.86
PAX3-210ENST00000555548 SOX9P48436 509 aa9.68□□□□□ -0.86
PAX3-210ENST00000555548 ZNF697Q5TEC3 545 aa9.68□□□□□ -0.86
PAX3-210ENST00000555548 PRPF40BQ6NWY9 871 aaKnown RBP9.68□□□□□ -0.86
PAX3-210ENST00000555548 KCNQ5Q9NR82 932 aa9.68□□□□□ -0.86
PAX3-210ENST00000555548 SIRPGQ9P1W8 387 aa9.68□□□□□ -0.86
PAX3-210ENST00000555548 RLBP1P12271 317 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 GBP2P32456 591 aaPredicted RBP9.67□□□□□ -0.86
PAX3-210ENST00000555548 POU4F2Q12837 409 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 FOXC1Q12948 553 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 COL9A2Q14055 689 aaPredicted RBP9.67□□□□□ -0.86
PAX3-210ENST00000555548 PTPROQ16827 1216 aa9.67□□□□□ -0.86
PAX3-210ENST00000555548 ARSJQ5FYB0 599 aaPredicted RBP9.67□□□□□ -0.86
PAX3-210ENST00000555548 TTC39BQ5VTQ0 682 aaPredicted RBP9.67□□□□□ -0.86
PAX3-210ENST00000555548 ZNF296Q8WUU4 475 aaPredicted RBP9.67□□□□□ -0.86
PAX3-210ENST00000555548 EAF1Q96JC9 268 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms