RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 USP47Q96K76 1375 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 TCEAL1Q15170 157 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 DUSP27Q5VZP5 1158 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 SKAP1Q86WV1 359 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 VPS37AQ8NEZ2 397 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 SPC25Q9HBM1 224 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 ATAD2Q6PL18 1390 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 LMO7Q8WWI1 1683 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 A0A1W2PP64 1363 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 IPO7O95373 1038 aaKnown RBP8.89□□□□□ -0.99
TGFB3-202ENST00000554980 LDHCP07864 332 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 TPM2P07951 284 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 U2AF1L5P0DN76 240 aaPredicted RBP8.89□□□□□ -0.99
TGFB3-202ENST00000554980 U2AF1Q01081 240 aaKnown RBP eCLIP8.89□□□□□ -0.99
TGFB3-202ENST00000554980 RPUSD2Q8IZ73 545 aaKnown RBP8.89□□□□□ -0.99
TGFB3-202ENST00000554980 STAG1Q8WVM7 1258 aa8.89□□□□□ -0.99
TGFB3-202ENST00000554980 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
TGFB3-202ENST00000554980 KCNA2P16389 499 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 ABCD1P33897 745 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 LONRF1Q17RB8 773 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 DEFB132Q7Z7B7 95 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 DZIP3Q86Y13 1208 aaKnown RBP8.88□□□□□ -0.99
TGFB3-202ENST00000554980 EPAS1Q99814 870 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 CPDO75976 1380 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 SLIT3O75094 1523 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 ERICH4A6NGS2 130 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 SKILP12757 684 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 LMNB1P20700 586 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 IRX5P78411 483 aaPredicted RBP8.88□□□□□ -0.99
TGFB3-202ENST00000554980 CCDC92Q53HC0 331 aaPredicted RBP8.88□□□□□ -0.99
TGFB3-202ENST00000554980 TTC39BQ5VTQ0 682 aaPredicted RBP8.88□□□□□ -0.99
TGFB3-202ENST00000554980 GIPC2Q8TF65 315 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
TGFB3-202ENST00000554980 MON2Q7Z3U7 1717 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 DHX8Q14562 1220 aaKnown RBP8.87□□□□□ -0.99
TGFB3-202ENST00000554980 KCTD2Q14681 263 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 KRT27Q7Z3Y8 459 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 DDX27Q96GQ7 796 aaKnown RBP8.87□□□□□ -0.99
TGFB3-202ENST00000554980 BCL2L13Q9BXK5 485 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 RGPD5Q99666 1765 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 KIF1CO43896 1103 aaKnown RBP8.87□□□□□ -0.99
TGFB3-202ENST00000554980 HIP1RO75146 1068 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 L1TD1Q5T7N2 865 aaKnown RBP8.87□□□□□ -0.99
TGFB3-202ENST00000554980 CCDC174Q6PII3 467 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 FMNL3Q8IVF7 1028 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 GAS2L2Q8NHY3 880 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 PIF1Q9H611 641 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 COL18A1P39060 1754 aa8.87□□□□□ -0.99
TGFB3-202ENST00000554980 ARHGEF25Q86VW2 580 aa8.86□□□□□ -0.99
TGFB3-202ENST00000554980 EFCC1Q9HA90 598 aa8.86□□□□□ -0.99
TGFB3-202ENST00000554980 IQSEC3Q9UPP2 1182 aaPredicted RBP8.86□□□□□ -0.99
TGFB3-202ENST00000554980 COL5A2P05997 1499 aaPredicted RBP8.86□□□□□ -0.99
TGFB3-202ENST00000554980 ATG7O95352 703 aa8.86□□□□□ -0.99
TGFB3-202ENST00000554980 RECKO95980 971 aa8.86□□□□□ -0.99
TGFB3-202ENST00000554980 CGNQ9P2M7 1197 aaKnown RBP8.86□□□□□ -0.99
TGFB3-202ENST00000554980 KIF16BQ96L93 1317 aa8.86□□□□□ -0.99
TGFB3-202ENST00000554980 NFAT5O94916 1531 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 NEFHP12036 1026 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 NPAS4Q8IUM7 802 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 KRI1Q8N9T8 703 aaKnown RBP8.85□□□□□ -0.99
TGFB3-202ENST00000554980 THSD7AQ9UPZ6 1657 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 TBC1D12O60347 775 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 CAPN2P17655 700 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 IBSPP21815 317 aaPredicted RBP8.85□□□□□ -0.99
TGFB3-202ENST00000554980 CCDC144BQ3MJ40 725 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 HSP90B2PQ58FF3 399 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 SVIPQ8NHG7 77 aa8.85□□□□□ -0.99
TGFB3-202ENST00000554980 BRD4O60885 1362 aaPredicted RBP8.85□□□□□ -0.99
TGFB3-202ENST00000554980 MAN1A1P33908 653 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 PNNQ9H307 717 aaKnown RBP8.84□□□□□ -0.99
TGFB3-202ENST00000554980 TTC21AQ8NDW8 1320 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 AATKQ6ZMQ8 1374 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 ZSCAN20P17040 1043 aaPredicted RBP8.84□□□□□ -0.99
TGFB3-202ENST00000554980 RRM1P23921 792 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 ATICP31939 592 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 TRPC1P48995 793 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 CATIPQ7Z7H3 387 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
TGFB3-202ENST00000554980 ALDH8A1Q9H2A2 487 aaPredicted RBP8.84□□□□□ -0.99
TGFB3-202ENST00000554980 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.83□□□□□ -1
TGFB3-202ENST00000554980 HDGFL2Q7Z4V5 671 aaPredicted RBP8.83□□□□□ -1
TGFB3-202ENST00000554980 NOL7Q9UMY1 257 aaKnown RBP8.83□□□□□ -1
TGFB3-202ENST00000554980 COL4A3BPQ9Y5P4 624 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 MAP9Q49MG5 647 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 USP31Q70CQ4 1352 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 PTF1AQ7RTS3 328 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 IQCF2Q8IXL9 164 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 TCP11L2Q8N4U5 519 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
TGFB3-202ENST00000554980 SMC4Q9NTJ3 1288 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 SLC45A1Q9Y2W3 748 aa8.83□□□□□ -1
TGFB3-202ENST00000554980 EDC4Q6P2E9 1401 aaKnown RBP8.82□□□□□ -1
TGFB3-202ENST00000554980 MTA2O94776 668 aa8.82□□□□□ -1
TGFB3-202ENST00000554980 FGAP02671 866 aa8.82□□□□□ -1
TGFB3-202ENST00000554980 CLK1P49759 484 aaKnown RBP8.82□□□□□ -1
TGFB3-202ENST00000554980 TMF1P82094 1093 aa8.82□□□□□ -1
TGFB3-202ENST00000554980 KIAA2012Q0VF49 1180 aa8.82□□□□□ -1
TGFB3-202ENST00000554980 ALDH1L2Q3SY69 923 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms