RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CCAR1Q8IX12 1150 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 KBTBD3Q8NAB2 608 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 LEO1Q8WVC0 666 aaPredicted RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 FAM227BQ96M60 508 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 PODXL2Q9NZ53 605 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ABCC3O15438 1527 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 RNMTO43148 476 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 PTGS1P23219 599 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 NBPF6Q5VWK0 638 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ZNF790Q6PG37 636 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 Q6ZUG5 572 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 WASF1Q92558 559 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 NBPF4Q96M43 638 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 TRMT1Q9NXH9 659 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 E9PCH4 1651 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 SPHKAPQ2M3C7 1700 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ZSCAN12O43309 604 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 RPS6KB1P23443 525 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ME3Q16798 604 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 PPP4R3BQ5MIZ7 849 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 CCDC102BQ68D86 513 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 LDHAL6AQ6ZMR3 332 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 KRT28Q7Z3Y7 464 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 LRRC59Q96AG4 307 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 RBM33Q96EV2 1170 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 LRRC2Q9BYS8 371 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 BRMS1Q9HCU9 246 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 CWC25Q9NXE8 425 aaPredicted RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 CGNQ9P2M7 1197 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 SHROOM2Q13796 1616 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ELP1O95163 1332 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 SLC27A2O14975 620 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ATP5JP18859 108 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 KIAA1524Q8TCG1 905 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 ACBD3Q9H3P7 528 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 SNRKQ9NRH2 765 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 NCOA3Q9Y6Q9 1424 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 GOLGA8BA8MQT2 603 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 URI1O94763 535 aaPredicted RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 IARSP41252 1262 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 GCKRQ14397 625 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 METTL24Q5JXM2 366 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 TMCO3Q6UWJ1 677 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 TMEM87AQ8NBN3 555 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 NFATC2IPQ8NCF5 419 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 NCOA7Q8NI08 942 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 MPHOSPH8Q99549 860 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 CCDC94Q9BW85 323 aaPredicted RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 LSG1Q9H089 658 aaKnown RBP4.53□□□□□ -1.68
KTN1-217ENST00000554831 COPRSQ9NQ92 184 aa4.53□□□□□ -1.68
KTN1-217ENST00000554831 TOP1P11387 765 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 FAM160A1Q05DH4 1040 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 NAA16Q6N069 864 aaPredicted RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 CCDC70Q6NSX1 233 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 KIF6Q6ZMV9 814 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 PPFIBP1Q86W92 1011 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 VPS37DQ86XT2 251 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 ADGRB3O60242 1522 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 GOLGA6L9A6NEM1 432 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 SPTLC2O15270 562 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 STARD3NLO95772 234 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 POLR3DP05423 398 aaPredicted RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 PTH1RQ03431 593 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 RRP12Q5JTH9 1297 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 CEP135Q66GS9 1140 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 DBNDD2Q9BQY9 259 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 NAPBQ9H115 298 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 ZBTB3Q9H5J0 574 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 BICC1Q9H694 974 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 USP6P35125 1406 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 KLF18A0A0U1RQI7 1052 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 PTPDC1A2A3K4 754 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 BIN1O00499 593 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 TIMM10P62072 90 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 POLA2Q14181 598 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 BMS1Q14692 1282 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 CCDC150Q8NCX0 1101 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 SMARCE1Q969G3 411 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 AIDAQ96BJ3 306 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 SYTL4Q96C24 671 aaPredicted RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 DCAF5Q96JK2 942 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 METTL22Q9BUU2 404 aaPredicted RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 BCL11BQ9C0K0 894 aaPredicted RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 NRXN1Q9ULB1 1477 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 ZCCHC11Q5TAX3 1644 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 KIAA1210Q9ULL0 1709 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 SLU7O95391 586 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 LIG1P18858 919 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 SYKP43405 635 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 SNW1Q13573 536 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 NECTIN1Q15223 517 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 ADCK5Q3MIX3 580 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 ZNF496Q96IT1 587 aaPredicted RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 UBAC1Q9BSL1 405 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 CLSTN2Q9H4D0 955 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 CBX8Q9HC52 389 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 NSFL1CQ9UNZ2 370 aaKnown RBP4.52□□□□□ -1.69
KTN1-217ENST00000554831 IQSEC2Q5JU85 1478 aa4.52□□□□□ -1.69
KTN1-217ENST00000554831 CCDC69A6NI79 296 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms