RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MTMR14Q8NCE2 650 aa7.16□□□□□ -1.26
ATXN3-229ENST00000554672 NGDNQ8NEJ9 315 aaKnown RBP7.16□□□□□ -1.26
ATXN3-229ENST00000554672 RNF217Q8TC41 542 aa7.16□□□□□ -1.26
ATXN3-229ENST00000554672 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
ATXN3-229ENST00000554672 ACIN1Q9UKV3 1341 aaKnown RBP7.16□□□□□ -1.26
ATXN3-229ENST00000554672 SENP3-EIF4A1A0A087X0R7 540 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 PTGIRP43119 386 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 CHRNA2Q15822 529 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 FOXD4L5Q5VV16 416 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-229ENST00000554672 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 NANOS1Q8WY41 292 aaKnown RBP7.15□□□□□ -1.26
ATXN3-229ENST00000554672 CYLDQ9NQC7 956 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 SNRKQ9NRH2 765 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 USP35Q9P2H5 1018 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
ATXN3-229ENST00000554672 ANKARQ7Z5J8 1434 aa7.15□□□□□ -1.27
ATXN3-229ENST00000554672 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
ATXN3-229ENST00000554672 BRWD3Q6RI45 1802 aa7.15□□□□□ -1.27
ATXN3-229ENST00000554672 WASLO00401 505 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-229ENST00000554672 PLSCR1O15162 318 aa7.14□□□□□ -1.27
ATXN3-229ENST00000554672 C1QTNF8P60827 252 aa7.14□□□□□ -1.27
ATXN3-229ENST00000554672 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
ATXN3-229ENST00000554672 TPRNQ4KMQ1 711 aa7.14□□□□□ -1.27
ATXN3-229ENST00000554672 SPATA31E1Q6ZUB1 1445 aa7.14□□□□□ -1.27
ATXN3-229ENST00000554672 BANK1Q8NDB2 785 aa7.14□□□□□ -1.27
ATXN3-229ENST00000554672 MPHOSPH9Q99550 1183 aa7.14□□□□□ -1.27
ATXN3-229ENST00000554672 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
ATXN3-229ENST00000554672 NWD2Q9ULI1 1742 aa7.13□□□□□ -1.27
ATXN3-229ENST00000554672 KIF1AQ12756 1690 aa7.13□□□□□ -1.27
ATXN3-229ENST00000554672 PIK3C2GO75747 1445 aa7.13□□□□□ -1.27
ATXN3-229ENST00000554672 EIF3AQ14152 1382 aaKnown RBP7.13□□□□□ -1.27
ATXN3-229ENST00000554672 KIAA0232Q92628 1395 aa7.13□□□□□ -1.27
ATXN3-229ENST00000554672 HIRIP3Q9BW71 556 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-229ENST00000554672 POLMQ9NP87 494 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-229ENST00000554672 PRR36Q9H6K5 1346 aa7.12□□□□□ -1.27
ATXN3-229ENST00000554672 NR1H3Q13133 447 aa7.12□□□□□ -1.27
ATXN3-229ENST00000554672 LARP1Q6PKG0 1096 aaKnown RBP7.12□□□□□ -1.27
ATXN3-229ENST00000554672 SYT17Q9BSW7 474 aa7.12□□□□□ -1.27
ATXN3-229ENST00000554672 TRAK1Q9UPV9 953 aa7.12□□□□□ -1.27
ATXN3-229ENST00000554672 KIF1BO60333 1816 aa7.12□□□□□ -1.27
ATXN3-229ENST00000554672 FAM181BA6NEQ2 426 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 ITGA6P23229 1130 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 RNFT1Q5M7Z0 435 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 NUTM2GQ5VZR2 741 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 VWA5B2Q8N398 1253 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 NUDT16Q96DE0 195 aaKnown RBP7.11□□□□□ -1.27
ATXN3-229ENST00000554672 CNTNAP3BQ96NU0 1288 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 CNTNAP3Q9BZ76 1288 aa7.11□□□□□ -1.27
ATXN3-229ENST00000554672 FMN2Q9NZ56 1722 aa7.1□□□□□ -1.27
ATXN3-229ENST00000554672 SCTRP47872 440 aa7.1□□□□□ -1.27
ATXN3-229ENST00000554672 ERVK-9P63128 1117 aa7.1□□□□□ -1.27
ATXN3-229ENST00000554672 COL25A1Q9BXS0 654 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-229ENST00000554672 ADGRB2O60241 1585 aa7.1□□□□□ -1.27
ATXN3-229ENST00000554672 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
ATXN3-229ENST00000554672 RNF144AP50876 292 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-229ENST00000554672 ABTB2Q8N961 1025 aa7.09□□□□□ -1.27
ATXN3-229ENST00000554672 FHDC1Q9C0D6 1143 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-229ENST00000554672 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-229ENST00000554672 CUEDC1Q9NWM3 386 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-229ENST00000554672 STK32BQ9NY57 414 aa7.09□□□□□ -1.27
ATXN3-229ENST00000554672 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
ATXN3-229ENST00000554672 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
ATXN3-229ENST00000554672 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
ATXN3-229ENST00000554672 SSH2Q76I76 1423 aa7.09□□□□□ -1.28
ATXN3-229ENST00000554672 GCP02774 474 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 SLC15A2Q16348 729 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 DDB1Q16531 1140 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 NLRP13Q86W25 1043 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 NDUFB9Q9Y6M9 179 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 PPLO60437 1756 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 CPDO75976 1380 aa7.08□□□□□ -1.28
ATXN3-229ENST00000554672 ACEP12821 1306 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 A0A1W2PRU2 124 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 ATP5J2-PTCD1G3V325 749 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 TXNRD1Q16881 649 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 CC2D2BQ6DHV5 1058 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 LYSMD3Q7Z3D4 306 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 PRICKLE2Q7Z3G6 844 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 CDCA7Q9BWT1 371 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-229ENST00000554672 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
ATXN3-229ENST00000554672 DLC1Q96QB1 1528 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 CDC14CA4D256 554 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 TRAK2O60296 914 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 RHOQP17081 205 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 MCCD1P59942 119 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-229ENST00000554672 GPR162Q16538 588 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 SV2AQ7L0J3 742 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 ARXQ96QS3 562 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 OSBPL3Q9H4L5 887 aa7.06□□□□□ -1.28
ATXN3-229ENST00000554672 KNDC1Q76NI1 1749 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 OVOS2A0A0J9YW53 1432 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 OVOS2Q6IE36 1432 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 MEN1O00255 615 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 GSK3AP49840 483 aa7.05□□□□□ -1.28
ATXN3-229ENST00000554672 RNF20Q5VTR2 975 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms