RNA–Protein interactions for RNA: ENST00000554624.5

PSMC1-204, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-204ENST00000554624 U2AF1L5P0DN76 240 aaPredicted RBP13.27□□□□□ -0.29
PSMC1-204ENST00000554624 COL9A1P20849 921 aa13.27□□□□□ -0.29
PSMC1-204ENST00000554624 U2AF1Q01081 240 aaKnown RBP eCLIP13.27□□□□□ -0.29
PSMC1-204ENST00000554624 MAP2K5Q13163 448 aa13.27□□□□□ -0.29
PSMC1-204ENST00000554624 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
PSMC1-204ENST00000554624 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 PRSS12P56730 875 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 ST5P78524 1137 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 SOGA3Q5TF21 947 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 CNBD1Q8NA66 436 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 CARMIL3Q8ND23 1372 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 SLC4A5Q9BY07 1137 aa13.26□□□□□ -0.29
PSMC1-204ENST00000554624 KCNQ3O43525 872 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 PPP2R1AP30153 589 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 RASSF7Q02833 373 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 STYK1Q6J9G0 422 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 POTEEQ6S8J3 1075 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 DZIP3Q86Y13 1208 aaKnown RBP13.25□□□□□ -0.29
PSMC1-204ENST00000554624 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
PSMC1-204ENST00000554624 KLRG1Q96E93 195 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 USP16Q9Y5T5 823 aa13.25□□□□□ -0.29
PSMC1-204ENST00000554624 COL3A1P02461 1466 aaPredicted RBP13.24□□□□□ -0.29
PSMC1-204ENST00000554624 NFKBIEO00221 500 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 C21orf2O43822 256 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 NEFMP07197 916 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
PSMC1-204ENST00000554624 TPTE2Q6XPS3 522 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 TTC13Q8NBP0 860 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 ADAMTS7Q9UKP4 1686 aa13.24□□□□□ -0.29
PSMC1-204ENST00000554624 SRGNP10124 158 aa13.23□□□□□ -0.29
PSMC1-204ENST00000554624 PSEN2P49810 448 aa13.23□□□□□ -0.29
PSMC1-204ENST00000554624 PRELPP51888 382 aa13.23□□□□□ -0.29
PSMC1-204ENST00000554624 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
PSMC1-204ENST00000554624 JMYQ8N9B5 988 aa13.23□□□□□ -0.29
PSMC1-204ENST00000554624 ARFGEF1Q9Y6D6 1849 aa13.23□□□□□ -0.29
PSMC1-204ENST00000554624 LTBP3Q9NS15 1303 aa13.22□□□□□ -0.29
PSMC1-204ENST00000554624 MCM10Q7L590 875 aa13.22□□□□□ -0.29
PSMC1-204ENST00000554624 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
PSMC1-204ENST00000554624 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
PSMC1-204ENST00000554624 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
PSMC1-204ENST00000554624 BRCA1P38398 1863 aaKnown RBP13.22□□□□□ -0.29
PSMC1-204ENST00000554624 IRF6O14896 467 aa13.21□□□□□ -0.29
PSMC1-204ENST00000554624 PADI6Q6TGC4 694 aa13.21□□□□□ -0.29
PSMC1-204ENST00000554624 CCDC24Q8N4L8 307 aa13.21□□□□□ -0.29
PSMC1-204ENST00000554624 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
PSMC1-204ENST00000554624 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
PSMC1-204ENST00000554624 KLRG2A4D1S0 409 aaPredicted RBP13.2□□□□□ -0.3
PSMC1-204ENST00000554624 TRIM6-TRIM34B2RNG4 842 aa13.2□□□□□ -0.3
PSMC1-204ENST00000554624 NPR1P16066 1061 aa13.2□□□□□ -0.3
PSMC1-204ENST00000554624 FECHP22830 423 aa13.2□□□□□ -0.3
PSMC1-204ENST00000554624 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
PSMC1-204ENST00000554624 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
PSMC1-204ENST00000554624 POTECB2RU33 542 aa13.19□□□□□ -0.3
PSMC1-204ENST00000554624 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
PSMC1-204ENST00000554624 HTRA3P83110 453 aa13.19□□□□□ -0.3
PSMC1-204ENST00000554624 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
PSMC1-204ENST00000554624 PRAMEF22A3QJZ6 481 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 TK2O00142 265 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 GTF2E1P29083 439 aaPredicted RBP13.18□□□□□ -0.3
PSMC1-204ENST00000554624 DCTN1Q14203 1278 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
PSMC1-204ENST00000554624 RTKN2Q8IZC4 609 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 C7orf43Q8WVR3 580 aa13.18□□□□□ -0.3
PSMC1-204ENST00000554624 NIP7Q9Y221 180 aaKnown RBP eCLIP13.18□□□□□ -0.3
PSMC1-204ENST00000554624 IQCA1LA6NCM1 817 aa13.17□□□□□ -0.3
PSMC1-204ENST00000554624 PIP4K2AP48426 406 aaPredicted RBP13.17□□□□□ -0.3
PSMC1-204ENST00000554624 CCDC93Q567U6 631 aa13.17□□□□□ -0.3
PSMC1-204ENST00000554624 DMRTA1Q5VZB9 504 aa13.17□□□□□ -0.3
PSMC1-204ENST00000554624 POTEGQ6S5H5 508 aa13.17□□□□□ -0.3
PSMC1-204ENST00000554624 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
PSMC1-204ENST00000554624 UBR2Q8IWV8 1755 aa13.17□□□□□ -0.3
PSMC1-204ENST00000554624 POTEMA6NI47 508 aa13.16□□□□□ -0.3
PSMC1-204ENST00000554624 OATP04181 439 aa13.16□□□□□ -0.3
PSMC1-204ENST00000554624 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
PSMC1-204ENST00000554624 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
PSMC1-204ENST00000554624 TSKSQ9UJT2 592 aa13.16□□□□□ -0.3
PSMC1-204ENST00000554624 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
PSMC1-204ENST00000554624 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.3
PSMC1-204ENST00000554624 GRIPAP1Q4V328 841 aa13.15□□□□□ -0.3
PSMC1-204ENST00000554624 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
PSMC1-204ENST00000554624 CCDC102AQ96A19 550 aa13.15□□□□□ -0.3
PSMC1-204ENST00000554624 RABGEF1Q9UJ41 708 aa13.15□□□□□ -0.3
PSMC1-204ENST00000554624 AFDNP55196 1824 aaKnown RBP13.15□□□□□ -0.3
PSMC1-204ENST00000554624 FKBP4Q02790 459 aaKnown RBP eCLIP13.14□□□□□ -0.31
PSMC1-204ENST00000554624 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
PSMC1-204ENST00000554624 HLFQ16534 295 aa13.14□□□□□ -0.31
PSMC1-204ENST00000554624 PROX2Q3B8N5 592 aa13.14□□□□□ -0.31
PSMC1-204ENST00000554624 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
PSMC1-204ENST00000554624 ADGRG1Q9Y653 693 aa13.14□□□□□ -0.31
PSMC1-204ENST00000554624 SBF1O95248 1867 aa13.14□□□□□ -0.31
PSMC1-204ENST00000554624 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
PSMC1-204ENST00000554624 KIF6Q6ZMV9 814 aa13.13□□□□□ -0.31
PSMC1-204ENST00000554624 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms