RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 CARMIL2Q6F5E8 1435 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 IQGAP1P46940 1657 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 SYNMO15061 1565 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 IFT140Q96RY7 1462 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 SFI1A8K8P3 1242 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 H3BRB1 525 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 HSP90AA2PQ14568 343 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-207ENST00000554439 PTCRAQ6ISU1 281 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-207ENST00000554439 TCP11L2Q8N4U5 519 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 PMFBP1Q8TBY8 1022 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 PURBQ96QR8 312 aaKnown RBP3.21□□□□□ -1.9
PRPF39-207ENST00000554439 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 TUT1Q9H6E5 874 aaKnown RBP3.21□□□□□ -1.9
PRPF39-207ENST00000554439 RTEL1-TNFRSF6BF6WH68 1400 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 UNC13BO14795 1591 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 MADDQ8WXG6 1647 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 ZBTB24O43167 697 aaPredicted RBP3.21□□□□□ -1.9
PRPF39-207ENST00000554439 LGR5O75473 907 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 HSP90AA1P07900 732 aaKnown RBP3.21□□□□□ -1.9
PRPF39-207ENST00000554439 ATP1A2P50993 1020 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 NUP160Q12769 1436 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 TSR2Q969E8 191 aaKnown RBP3.21□□□□□ -1.9
PRPF39-207ENST00000554439 NUDT12Q9BQG2 462 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 GRPEL1Q9HAV7 217 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 NOD1Q9Y239 953 aa3.21□□□□□ -1.9
PRPF39-207ENST00000554439 IQGAP3Q86VI3 1631 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ARHGAP5Q13017 1502 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ABL1P00519 1130 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 SEC13P55735 322 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 TRIM50Q86XT4 487 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ARMC2Q8NEN0 867 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ASB16Q96NS5 453 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 CHMP5Q9NZZ3 219 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 SEPT3Q9UH03 358 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 PREX2Q70Z35 1606 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 SCAF11Q99590 1463 aaKnown RBP3.2□□□□□ -1.9
PRPF39-207ENST00000554439 CEP152O94986 1710 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 TTC37Q6PGP7 1564 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ESPNB1AK53 854 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 C21orf2O43822 256 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 GIGYF1O75420 1035 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-207ENST00000554439 PROCP04070 461 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 WEE1P30291 646 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 MRE11P49959 708 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 GTF2IP78347 998 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 MTMR3Q13615 1198 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 MVPQ14764 893 aaKnown RBP3.2□□□□□ -1.9
PRPF39-207ENST00000554439 NBPF14Q5TI25 921 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ZNF385CQ66K41 422 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-207ENST00000554439 CCDC102BQ68D86 513 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ZNF592Q92610 1267 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 TNPO1Q92973 898 aaKnown RBP3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ARHGAP9Q9BRR9 750 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 RWDD1Q9H446 243 aaPredicted RBP3.2□□□□□ -1.9
PRPF39-207ENST00000554439 MYH16Q9H6N6 1097 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 DOLKQ9UPQ8 538 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 AK9Q5TCS8 1911 aa3.2□□□□□ -1.9
PRPF39-207ENST00000554439 ERVK-7P63135 1459 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 TLL1O43897 1013 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 YBX3P16989 372 aaKnown RBP eCLIP3.19□□□□□ -1.9
PRPF39-207ENST00000554439 FKBP5Q13451 457 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-207ENST00000554439 C4orf48Q5BLP8 95 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 LDLRAD1Q5T700 205 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 MORC1Q86VD1 984 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 ITPRIPQ8IWB1 547 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 HSCBQ8IWL3 235 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 FTSJ3Q8IY81 847 aaKnown RBP3.19□□□□□ -1.9
PRPF39-207ENST00000554439 GTF3C2Q8WUA4 911 aaPredicted RBP3.19□□□□□ -1.9
PRPF39-207ENST00000554439 RUNDC1Q96C34 613 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 C8orf37Q96NL8 207 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 UNC93B1Q9H1C4 597 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 SLC12A5Q9H2X9 1139 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 ADGRF5Q8IZF2 1346 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 PLXNC1O60486 1568 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 NPC1L1Q9UHC9 1359 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 KDM5AP29375 1690 aaKnown RBP3.19□□□□□ -1.9
PRPF39-207ENST00000554439 SHPRHQ149N8 1683 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 RRP9O43818 475 aaKnown RBP3.19□□□□□ -1.9
PRPF39-207ENST00000554439 TRIM27P14373 513 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 DDIT3P35638 169 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 VEGFBP49765 207 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 MTHFSP49914 203 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 TPCN2Q8NHX9 752 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 GAS2L2Q8NHY3 880 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 HPS1Q92902 700 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 LNPKQ9C0E8 428 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 MAST1Q9Y2H9 1570 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 CLTCL1P53675 1640 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 NINLQ9Y2I6 1382 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 NSD3Q9BZ95 1437 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 ATP10AO60312 1499 aa3.19□□□□□ -1.9
PRPF39-207ENST00000554439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.19□□□□□ -1.9
PRPF39-207ENST00000554439 UGGT1Q9NYU2 1555 aa3.18□□□□□ -1.9
PRPF39-207ENST00000554439 MAPK1P28482 360 aa3.18□□□□□ -1.9
PRPF39-207ENST00000554439 GLIPR1L2Q4G1C9 344 aa3.18□□□□□ -1.9
PRPF39-207ENST00000554439 OXLD1Q5BKU9 147 aa3.18□□□□□ -1.9
PRPF39-207ENST00000554439 GLYCTKQ8IVS8 523 aa3.18□□□□□ -1.9
PRPF39-207ENST00000554439 DZIP1LQ8IYY4 767 aaKnown RBP3.18□□□□□ -1.9
PRPF39-207ENST00000554439 SPSB2Q99619 263 aa3.18□□□□□ -1.9
PRPF39-207ENST00000554439 KRTAP17-1Q9BYP8 105 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms