RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 FTOQ9C0B1 505 aaKnown RBP eCLIP19.98■□□□□ 0.791e-7■□□□□ 8.2
PPP4R3A-202ENST00000554390 TIGD1Q96MW7 591 aa19.98■□□□□ 0.79
PPP4R3A-202ENST00000554390 ZNF215Q9UL58 517 aaPredicted RBP19.98■□□□□ 0.79
PPP4R3A-202ENST00000554390 CCDC171Q6TFL3 1326 aa19.97■□□□□ 0.79
PPP4R3A-202ENST00000554390 PLEKHG1Q9ULL1 1385 aa19.97■□□□□ 0.79
PPP4R3A-202ENST00000554390 TNMDQ9H2S6 317 aa19.97■□□□□ 0.79
PPP4R3A-202ENST00000554390 CCDC144BQ3MJ40 725 aa19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 CCDC144CPQ8IYA2 1237 aa19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 KAZALD1Q96I82 304 aa19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 CLIP2Q9UDT6 1046 aa19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 ZKSCAN1P17029 563 aaPredicted RBP19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 NECTIN1Q15223 517 aa19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 ZSWIM6Q9HCJ5 1215 aa19.96■□□□□ 0.79
PPP4R3A-202ENST00000554390 SLC27A2O14975 620 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 PIK3C2AO00443 1686 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 AOX1Q06278 1338 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 GOLGA6L4A6NEF3 574 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 KRT85P78386 507 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 FBXO38Q6PIJ6 1188 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 ST7Q9NRC1 585 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 FAM53CQ9NYF3 392 aa19.95■□□□□ 0.78
PPP4R3A-202ENST00000554390 USP27XA6NNY8 438 aa19.94■□□□□ 0.78
PPP4R3A-202ENST00000554390 RBM6P78332 1123 aaKnown RBP19.94■□□□□ 0.78
PPP4R3A-202ENST00000554390 VPS53Q5VIR6 699 aa19.94■□□□□ 0.78
PPP4R3A-202ENST00000554390 IPO4Q8TEX9 1081 aaKnown RBP19.94■□□□□ 0.78
PPP4R3A-202ENST00000554390 NR1I2O75469 434 aa19.94■□□□□ 0.78
PPP4R3A-202ENST00000554390 EPHA10Q5JZY3 1008 aa19.94■□□□□ 0.78
PPP4R3A-202ENST00000554390 TDRD7Q8NHU6 1098 aaKnown RBP19.94■□□□□ 0.78
PPP4R3A-202ENST00000554390 ESCO1Q5FWF5 840 aa19.93■□□□□ 0.78
PPP4R3A-202ENST00000554390 RUFY2Q8WXA3 655 aa19.93■□□□□ 0.78
PPP4R3A-202ENST00000554390 DNAJC2Q99543 621 aaKnown RBP19.93■□□□□ 0.78
PPP4R3A-202ENST00000554390 DNAJC25Q9H1X3 360 aa19.93■□□□□ 0.78
PPP4R3A-202ENST00000554390 ARID5BQ14865 1188 aa19.93■□□□□ 0.78
PPP4R3A-202ENST00000554390 ELF2Q15723 593 aa19.93■□□□□ 0.78
PPP4R3A-202ENST00000554390 GUCY1B3Q02153 619 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 G3BP1Q13283 466 aaKnown RBP eCLIP19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 BICD2Q8TD16 824 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 DIP2AQ14689 1571 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 A0A0G2JLW4 131 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 ZNF165P49910 485 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 BLOC1S2Q6QNY1 142 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 SPATA32Q96LK8 384 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 PTPN14Q15678 1187 aa19.92■□□□□ 0.78
PPP4R3A-202ENST00000554390 LRRC37A3O60309 1634 aa19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 HSP90B1P14625 803 aaKnown RBP19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 CHST3Q7LGC8 479 aa19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 LRRC8AQ8IWT6 810 aa19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 CALCOCO1Q9P1Z2 691 aa19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 TOB2Q14106 344 aaPredicted RBP19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 DBF4Q9UBU7 674 aaPredicted RBP19.91■□□□□ 0.78
PPP4R3A-202ENST00000554390 PSME1Q06323 249 aa19.9■□□□□ 0.78
PPP4R3A-202ENST00000554390 EVI5LQ96CN4 794 aa19.9■□□□□ 0.78
PPP4R3A-202ENST00000554390 ELP1O95163 1332 aa19.9■□□□□ 0.78
PPP4R3A-202ENST00000554390 NWD1Q149M9 1564 aa19.9■□□□□ 0.78
PPP4R3A-202ENST00000554390 ERO1AQ96HE7 468 aa19.89■□□□□ 0.78
PPP4R3A-202ENST00000554390 ZSCAN31Q96LW9 406 aaPredicted RBP19.89■□□□□ 0.78
PPP4R3A-202ENST00000554390 SH2B1Q9NRF2 756 aaPredicted RBP19.89■□□□□ 0.78
PPP4R3A-202ENST00000554390 USP16Q9Y5T5 823 aa19.89■□□□□ 0.78
PPP4R3A-202ENST00000554390 ATP5J2-PTCD1G3V325 749 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 NPHP1O15259 732 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 PTCD1O75127 700 aaKnown RBP19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 GIGYF1O75420 1035 aaPredicted RBP19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 TTC41PQ6P2S7 1318 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 NYAP1Q6ZVC0 841 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 DDX46Q7L014 1031 aaKnown RBP19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 RIC3Q7Z5B4 369 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 MAP4K1Q92918 833 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 SYTL4Q96C24 671 aaPredicted RBP19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 GRM8O00222 908 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 HSP90AB4PQ58FF6 505 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 GPATCH3Q96I76 525 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 PGBD1Q96JS3 809 aa19.89■□□□□ 0.77
PPP4R3A-202ENST00000554390 PLCD3Q8N3E9 789 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 DDX19AQ9NUU7 478 aaKnown RBP19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 TRMT1Q9NXH9 659 aaKnown RBP19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 PXDNLA1KZ92 1463 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 CAPN2P17655 700 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 C1orf141Q5JVX7 400 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 KSR2Q6VAB6 950 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 RBM43Q6ZSC3 357 aaKnown RBP19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 CLSTN2Q9H4D0 955 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 ZNF446Q9NWS9 450 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 PHF8Q9UPP1 1060 aa19.88■□□□□ 0.77
PPP4R3A-202ENST00000554390 IGKV5-2P06315 115 aa19.87■□□□□ 0.77
PPP4R3A-202ENST00000554390 CCT2P78371 535 aaKnown RBP19.87■□□□□ 0.77
PPP4R3A-202ENST00000554390 RAB11FIP4Q86YS3 637 aa19.87■□□□□ 0.77
PPP4R3A-202ENST00000554390 BRF1Q92994 677 aa19.87■□□□□ 0.77
PPP4R3A-202ENST00000554390 MYD88Q99836 296 aa19.87■□□□□ 0.77
PPP4R3A-202ENST00000554390 SKILP12757 684 aa19.87■□□□□ 0.77
PPP4R3A-202ENST00000554390 TULP2O00295 520 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 RNMTO43148 476 aaKnown RBP19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 CDC25BP30305 580 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 LEO1Q8WVC0 666 aaPredicted RBP19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 ERBB3P21860 1342 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 IP6K1Q92551 441 aa19.86■□□□□ 0.77
PPP4R3A-202ENST00000554390 NOL10Q9BSC4 688 aaKnown RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms