RNA–Protein interactions for RNA: ENST00000554299.1

AL355102.3-201, humanhuman

BASIC

Gene AL355102.3, Length 1,678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355102.3-201ENST00000554299 KRT32Q14532 448 aa16.62■□□□□ 0.25
AL355102.3-201ENST00000554299 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
AL355102.3-201ENST00000554299 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
AL355102.3-201ENST00000554299 TTLL7Q6ZT98 887 aa16.62■□□□□ 0.25
AL355102.3-201ENST00000554299 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
AL355102.3-201ENST00000554299 RRAGDQ9NQL2 400 aaPredicted RBP16.62■□□□□ 0.25
AL355102.3-201ENST00000554299 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
AL355102.3-201ENST00000554299 SYT1P21579 422 aa16.61■□□□□ 0.25
AL355102.3-201ENST00000554299 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
AL355102.3-201ENST00000554299 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
AL355102.3-201ENST00000554299 TMEM63CQ9P1W3 806 aa16.61■□□□□ 0.25
AL355102.3-201ENST00000554299 TJP1Q07157 1748 aa16.61■□□□□ 0.25
AL355102.3-201ENST00000554299 TRIM28Q13263 835 aaKnown RBP16.6■□□□□ 0.25
AL355102.3-201ENST00000554299 ATG9AQ7Z3C6 839 aa16.6■□□□□ 0.25
AL355102.3-201ENST00000554299 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
AL355102.3-201ENST00000554299 ISCA1Q9BUE6 129 aa16.6■□□□□ 0.25
AL355102.3-201ENST00000554299 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
AL355102.3-201ENST00000554299 PALLDQ8WX93 1383 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 PHF14O94880 888 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 LARGE1O95461 756 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 F13A1P00488 732 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 A1BGP04217 495 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 CPA1P15085 419 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 RPS6KB1P23443 525 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 BLOC1S2Q6QNY1 142 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 CHAMP1Q96JM3 812 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 U3KPZ7 1027 aaPredicted RBP16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 SH3TC1Q8TE82 1336 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 ZNF335Q9H4Z2 1342 aaPredicted RBP16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 CLCN1P35523 988 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 CSPP1Q1MSJ5 1256 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 ZNF589Q86UQ0 364 aaPredicted RBP16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 KBTBD3Q8NAB2 608 aa16.59■□□□□ 0.25
AL355102.3-201ENST00000554299 EYA2O00167 538 aa16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 EVA1CP58658 441 aa16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 ME3Q16798 604 aa16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 CCDC83Q8IWF9 413 aa16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 TRIM44Q96DX7 344 aaPredicted RBP16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 TMOD3Q9NYL9 352 aa16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 NSFL1CQ9UNZ2 370 aaKnown RBP16.58■□□□□ 0.24
AL355102.3-201ENST00000554299 GJB2P29033 226 aa16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 MCMDC2Q4G0Z9 681 aa16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 RBSNQ9H1K0 784 aa16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 TPCN1Q9ULQ1 816 aa16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 ZNF609O15014 1411 aa16.57■□□□□ 0.24
AL355102.3-201ENST00000554299 PDCP20941 246 aa16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 TCIRG1Q13488 830 aa16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 HS1BP3Q53T59 392 aa16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 PLA2G12BQ9BX93 195 aa16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 HELLSQ9NRZ9 838 aa16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 TOGARAM1Q9Y4F4 1720 aa16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 ESPNB1AK53 854 aa16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 EDC3Q96F86 508 aaKnown RBP16.56■□□□□ 0.24
AL355102.3-201ENST00000554299 SYCE3A1L190 88 aa16.55■□□□□ 0.24
AL355102.3-201ENST00000554299 LETM1O95202 739 aaPredicted RBP16.55■□□□□ 0.24
AL355102.3-201ENST00000554299 UBE2HP62256 183 aa16.55■□□□□ 0.24
AL355102.3-201ENST00000554299 PDLIM2Q96JY6 352 aa16.55■□□□□ 0.24
AL355102.3-201ENST00000554299 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
AL355102.3-201ENST00000554299 STRN4Q9NRL3 753 aa16.55■□□□□ 0.24
AL355102.3-201ENST00000554299 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
AL355102.3-201ENST00000554299 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
AL355102.3-201ENST00000554299 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
AL355102.3-201ENST00000554299 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
AL355102.3-201ENST00000554299 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
AL355102.3-201ENST00000554299 LARP6Q9BRS8 491 aaKnown RBP16.54■□□□□ 0.24
AL355102.3-201ENST00000554299 LRP6O75581 1613 aa16.54■□□□□ 0.24
AL355102.3-201ENST00000554299 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 TOB2Q14106 344 aaPredicted RBP16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 DSCC1Q9BVC3 393 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 GADD45BO75293 160 aaPredicted RBP16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 STARD3NLO95772 234 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 HMGB1P09429 215 aaKnown RBP16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 CCDC183Q5T5S1 534 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 KIF6Q6ZMV9 814 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 NEK1Q96PY6 1258 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 TSPY26PQ9H489 355 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
AL355102.3-201ENST00000554299 ABCC12Q96J65 1359 aa16.52■□□□□ 0.24
AL355102.3-201ENST00000554299 AKAP2Q9Y2D5 859 aa16.52■□□□□ 0.23
AL355102.3-201ENST00000554299 CSF1RP07333 972 aa16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 FAM184AQ8NB25 1140 aa16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 PIGBQ92521 554 aa16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 NEUROD6Q96NK8 337 aa16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 TAF6LQ9Y6J9 622 aa16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
AL355102.3-201ENST00000554299 LRRC24Q50LG9 513 aa16.5■□□□□ 0.23
AL355102.3-201ENST00000554299 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms