RNA–Protein interactions for RNA: ENST00000554259.5

RALGAPA1-206, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 3,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-206	ENST00000554259	MTMR2	Q13614	643 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	FAM43A	Q8N2R8	423 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	FRAT1	Q92837	279 aa	Predicted RBP	3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	USP6	P35125	1406 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	ADGRB1	O14514	1584 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	LOR	P23490	312 aa	Predicted RBP	3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	MSL1	Q68DK7	614 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	RIC3	Q7Z5B4	369 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	KRTAP9-2	Q9BYQ4	174 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	LRRC4B	Q9NT99	713 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	WWC3	Q9ULE0	1092 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	RGPD1	P0DJD0	1748 aa		3.05	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	ZNF827	Q17R98	1081 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	SH3D19	Q5HYK7	790 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	MPRIP	Q6WCQ1	1025 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	FLAD1	Q8NFF5	587 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	IP6K1	Q92551	441 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	ZBTB3	Q9H5J0	574 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	KNDC1	Q76NI1	1749 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	RNF123	Q5XPI4	1314 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	ZC3H4	Q9UPT8	1303 aa	Known RBP	3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	MOXD2P	A6NHM9	499 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	CCNYL3	P0C7X3	344 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	TAT	P17735	454 aa	Predicted RBP	3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	EXOC6	Q8TAG9	804 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	BEGAIN	Q9BUH8	593 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	IFT172	Q9UG01	1749 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	RRP1	P56182	461 aa	Known RBP	3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	TRIM32	Q13049	653 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	MYSM1	Q5VVJ2	828 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	NLGN2	Q8NFZ4	835 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	CDK15	Q96Q40	435 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	USP47	Q96K76	1375 aa		3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	CPSF1	Q10570	1443 aa	Known RBP	3.04	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	SMPD1	P17405	629 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	FBLN1	P23142	703 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	SKOR1	P84550	965 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	C1QTNF2	Q9BXJ5	285 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	KRTAP4-7	Q9BYR0	210 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	AAAS	Q9NRG9	546 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	RCAN3	Q9UKA8	241 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	NDUFV2	P19404	249 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	SKIV2L	Q15477	1246 aa	Known RBP	3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259		Q6ZNB5	142 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	COL23A1	Q86Y22	540 aa	Predicted RBP	3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	TRMT44	Q8IYL2	757 aa	Known RBP	3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	SMARCC1	Q92922	1105 aa	Predicted RBP	3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	HLA-C	Q95604	372 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	NAP1L5	Q96NT1	182 aa	Predicted RBP	3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	CD2AP	Q9Y5K6	639 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	PNPLA7	Q6ZV29	1317 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	ALS2	Q96Q42	1657 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	THSD7A	Q9UPZ6	1657 aa		3.03	□□□□□ -1.92
RALGAPA1-206	ENST00000554259	ZBTB24	O43167	697 aa	Predicted RBP	3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	VARS	P26640	1264 aa	Known RBP	3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	RRS1	Q15050	365 aa	Known RBP	3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	L1TD1	Q5T7N2	865 aa	Known RBP	3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	USHBP1	Q8N6Y0	703 aa		3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	PRR7	Q8TB68	274 aa		3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	GGNBP2	Q9H3C7	697 aa		3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	SLC24A3	Q9HC58	644 aa		3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	BCL9	O00512	1426 aa		3.03	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	NRAP	Q86VF7	1730 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	TRPM3	Q9HCF6	1732 aa	Predicted RBP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	YBX3	P16989	372 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	HOXC9	P31274	260 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	GUCA2A	Q02747	115 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	HSP90AA2P	Q14568	343 aa	Predicted RBP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	PTCRA	Q6ISU1	281 aa	Predicted RBP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	NUDT12	Q9BQG2	462 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	PNN	Q9H307	717 aa	Known RBP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	KIF7	Q2M1P5	1343 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	MAP3K19	Q56UN5	1328 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	ST20-MTHFS	A0A0A6YYL1	179 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	FRAT2	O75474	233 aa	Predicted RBP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	HSP90AA1	P07900	732 aa	Known RBP	3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	HSPA6	P17066	643 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	CDCA8	Q53HL2	280 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	NBPF6	Q5VWK0	638 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	ARHGAP27	Q6ZUM4	889 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	ARMC2	Q8NEN0	867 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	NBPF4	Q96M43	638 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	SPG7	Q9UQ90	795 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	MAP4K5	Q9Y4K4	846 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	CGNL1	Q0VF96	1302 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	TNS2	Q63HR2	1409 aa		3.02	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	CFAP99	D6REC4	459 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	TMF1	P82094	1093 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	TTLL12	Q14166	644 aa	Predicted RBP	3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	HSP90AB2P	Q58FF8	381 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	PNISR	Q8TF01	805 aa	Known RBP	3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	ZMYND15	Q9H091	742 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	SENP2	Q9HC62	589 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	TMOD3	Q9NYL9	352 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	BCS1L	Q9Y276	419 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	USP31	Q70CQ4	1352 aa		3.01	□□□□□ -1.93
RALGAPA1-206	ENST00000554259	ANKRD36B	Q8N2N9	1353 aa		3.01	□□□□□ -1.93

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