RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 BRCA1P38398 1863 aaKnown RBP22.63■■□□□ 1.21
PSEN1-208ENST00000553719 PDE6BP35913 854 aa22.63■■□□□ 1.21
PSEN1-208ENST00000553719 MTX1Q13505 466 aa22.63■■□□□ 1.21
PSEN1-208ENST00000553719 NLRP3Q96P20 1036 aa22.63■■□□□ 1.21
PSEN1-208ENST00000553719 C1orf115Q9H7X2 142 aa22.63■■□□□ 1.21
PSEN1-208ENST00000553719 HDAC5Q9UQL6 1122 aa22.63■■□□□ 1.21
PSEN1-208ENST00000553719 SRGNP10124 158 aa22.61■■□□□ 1.21
PSEN1-208ENST00000553719 HOXA10P31260 410 aaPredicted RBP22.61■■□□□ 1.21
PSEN1-208ENST00000553719 LMBR1LQ6UX01 489 aa22.61■■□□□ 1.21
PSEN1-208ENST00000553719 PDZRN3Q9UPQ7 1066 aa22.61■■□□□ 1.21
PSEN1-208ENST00000553719 AAMPQ13685 434 aa22.6■■□□□ 1.21
PSEN1-208ENST00000553719 TGFB2P61812 414 aa22.59■■□□□ 1.21
PSEN1-208ENST00000553719 FAM161AQ3B820 660 aa22.59■■□□□ 1.21
PSEN1-208ENST00000553719 CCDC152Q4G0S7 254 aa22.59■■□□□ 1.21
PSEN1-208ENST00000553719 CEP85Q6P2H3 762 aa22.59■■□□□ 1.21
PSEN1-208ENST00000553719 GREM2Q9H772 168 aa22.59■■□□□ 1.21
PSEN1-208ENST00000553719 TAF1P21675 1872 aa22.58■■□□□ 1.21
PSEN1-208ENST00000553719 KCNA3P22001 575 aa22.58■■□□□ 1.21
PSEN1-208ENST00000553719 CHRNA5P30532 468 aa22.58■■□□□ 1.21
PSEN1-208ENST00000553719 C2CD5Q86YS7 1000 aa22.58■■□□□ 1.21
PSEN1-208ENST00000553719 RFX5P48382 616 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-208ENST00000553719 FHDC1Q9C0D6 1143 aaPredicted RBP22.57■■□□□ 1.2
PSEN1-208ENST00000553719 NPR1P16066 1061 aa22.56■■□□□ 1.2
PSEN1-208ENST00000553719 DPEP1P16444 411 aa22.56■■□□□ 1.2
PSEN1-208ENST00000553719 STYK1Q6J9G0 422 aa22.56■■□□□ 1.2
PSEN1-208ENST00000553719 SIRT2Q8IXJ6 389 aa22.56■■□□□ 1.2
PSEN1-208ENST00000553719 MASTLQ96GX5 879 aa22.56■■□□□ 1.2
PSEN1-208ENST00000553719 LRRC37AA6NMS7 1700 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 PNMA6EA0A0J9YXQ4 647 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 H0YIN7 160 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 ATP8B2P98198 1209 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 POLA2Q14181 598 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 NLGN2Q8NFZ4 835 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 CCDC85AQ96PX6 553 aaPredicted RBP22.55■■□□□ 1.2
PSEN1-208ENST00000553719 CRAMP1Q96RY5 1269 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 SEC31BQ9NQW1 1179 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 PCDHB15Q9Y5E8 787 aa22.55■■□□□ 1.2
PSEN1-208ENST00000553719 GOLGB1Q14789 3259 aaKnown RBP22.55■■□□□ 1.2
PSEN1-208ENST00000553719 ITGA6P23229 1130 aa22.54■■□□□ 1.2
PSEN1-208ENST00000553719 RPAP2Q8IXW5 612 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-208ENST00000553719 SSH3Q8TE77 659 aa22.54■■□□□ 1.2
PSEN1-208ENST00000553719 RPGRQ92834 1020 aaKnown RBP22.54■■□□□ 1.2
PSEN1-208ENST00000553719 A0A0G2JLW4 131 aa22.53■■□□□ 1.2
PSEN1-208ENST00000553719 CELF1Q92879 486 aaKnown RBP22.53■■□□□ 1.2
PSEN1-208ENST00000553719 RBM17Q96I25 401 aaKnown RBP22.53■■□□□ 1.2
PSEN1-208ENST00000553719 SYT17Q9BSW7 474 aa22.53■■□□□ 1.2
PSEN1-208ENST00000553719 PPP1R1BQ9UD71 204 aaPredicted RBP22.53■■□□□ 1.2
PSEN1-208ENST00000553719 CACNA1SQ13698 1873 aa22.53■■□□□ 1.2
PSEN1-208ENST00000553719 SLX4Q8IY92 1834 aa22.52■■□□□ 1.2
PSEN1-208ENST00000553719 SPEF2Q9C093 1822 aa22.52■■□□□ 1.2
PSEN1-208ENST00000553719 SRGAP3O43295 1099 aa22.52■■□□□ 1.2
PSEN1-208ENST00000553719 GRAPQ13588 217 aa22.52■■□□□ 1.2
PSEN1-208ENST00000553719 DDX46Q7L014 1031 aaKnown RBP22.52■■□□□ 1.2
PSEN1-208ENST00000553719 GRAPLQ8TC17 118 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-208ENST00000553719 PTPN12Q05209 780 aaKnown RBP22.51■■□□□ 1.19
PSEN1-208ENST00000553719 IFIT5Q13325 482 aaKnown RBP22.51■■□□□ 1.19
PSEN1-208ENST00000553719 KLHL34Q8N239 644 aa22.51■■□□□ 1.19
PSEN1-208ENST00000553719 CHMP3Q9Y3E7 222 aa22.51■■□□□ 1.19
PSEN1-208ENST00000553719 A0A1B0GUL6 1792 aa22.5■■□□□ 1.19
PSEN1-208ENST00000553719 ANKRD18BA2A2Z9 1011 aa22.5■■□□□ 1.19
PSEN1-208ENST00000553719 NEFLP07196 543 aa22.5■■□□□ 1.19
PSEN1-208ENST00000553719 CCDC57Q2TAC2 916 aa22.5■■□□□ 1.19
PSEN1-208ENST00000553719 COPRSQ9NQ92 184 aa22.5■■□□□ 1.19
PSEN1-208ENST00000553719 SNED1Q8TER0 1413 aa22.49■■□□□ 1.19
PSEN1-208ENST00000553719 ALDH1B1P30837 517 aa22.49■■□□□ 1.19
PSEN1-208ENST00000553719 CNKSR1Q969H4 720 aa22.49■■□□□ 1.19
PSEN1-208ENST00000553719 ZNF594Q96JF6 807 aaPredicted RBP22.49■■□□□ 1.19
PSEN1-208ENST00000553719 CDC5LQ99459 802 aaKnown RBP22.49■■□□□ 1.19
PSEN1-208ENST00000553719 LTBP1Q14766 1721 aa22.48■■□□□ 1.19
PSEN1-208ENST00000553719 ARFGEF1Q9Y6D6 1849 aa22.48■■□□□ 1.19
PSEN1-208ENST00000553719 RPS8P62241 208 aaKnown RBP22.48■■□□□ 1.19
PSEN1-208ENST00000553719 KLHDC4Q8TBB5 520 aa22.48■■□□□ 1.19
PSEN1-208ENST00000553719 ZNF622Q969S3 477 aaKnown RBP eCLIP22.48■■□□□ 1.19
PSEN1-208ENST00000553719 BBOX1O75936 387 aa22.47■■□□□ 1.19
PSEN1-208ENST00000553719 PRPF40BQ6NWY9 871 aaKnown RBP22.47■■□□□ 1.19
PSEN1-208ENST00000553719 SLC51AQ86UW1 340 aa22.47■■□□□ 1.19
PSEN1-208ENST00000553719 C7orf43Q8WVR3 580 aa22.47■■□□□ 1.19
PSEN1-208ENST00000553719 PIM2Q9P1W9 311 aa22.47■■□□□ 1.19
PSEN1-208ENST00000553719 PA2G4Q9UQ80 394 aaKnown RBP22.47■■□□□ 1.19
PSEN1-208ENST00000553719 ERICH6BQ5W0A0 696 aa22.46■■□□□ 1.19
PSEN1-208ENST00000553719 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
PSEN1-208ENST00000553719 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
PSEN1-208ENST00000553719 BSDC1Q9NW68 430 aaPredicted RBP22.46■■□□□ 1.19
PSEN1-208ENST00000553719 FBXO3Q9UK99 471 aa22.46■■□□□ 1.19
PSEN1-208ENST00000553719 NOP58Q9Y2X3 529 aaKnown RBP22.46■■□□□ 1.19
PSEN1-208ENST00000553719 HDAC1Q13547 482 aaPredicted RBP22.45■■□□□ 1.18
PSEN1-208ENST00000553719 TMC4Q7Z404 712 aa22.45■■□□□ 1.18
PSEN1-208ENST00000553719 PPEF1O14829 653 aaPredicted RBP22.44■■□□□ 1.18
PSEN1-208ENST00000553719 HMMRO75330 724 aa22.44■■□□□ 1.18
PSEN1-208ENST00000553719 IGHMBP2P38935 993 aaKnown RBP22.44■■□□□ 1.18
PSEN1-208ENST00000553719 ATG9AQ7Z3C6 839 aa22.44■■□□□ 1.18
PSEN1-208ENST00000553719 PUS3Q9BZE2 481 aaKnown RBP22.44■■□□□ 1.18
PSEN1-208ENST00000553719 DUOX1Q9NRD9 1551 aa22.43■■□□□ 1.18
PSEN1-208ENST00000553719 EYA2O00167 538 aa22.43■■□□□ 1.18
PSEN1-208ENST00000553719 CIAO1O76071 339 aa22.43■■□□□ 1.18
PSEN1-208ENST00000553719 LRRC24Q50LG9 513 aa22.43■■□□□ 1.18
PSEN1-208ENST00000553719 ATP6V0A2Q9Y487 856 aa22.43■■□□□ 1.18
PSEN1-208ENST00000553719 RIPOR2Q9Y4F9 1068 aa22.43■■□□□ 1.18
PSEN1-208ENST00000553719 DALRD3Q5D0E6 543 aaKnown RBP22.42■■□□□ 1.18
PSEN1-208ENST00000553719 LDHAL6AQ6ZMR3 332 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms