RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 TXLNAP40222 546 aa9.59□□□□□ -0.87
ATXN3-223ENST00000553686 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
ATXN3-223ENST00000553686 CFHR5Q9BXR6 569 aa9.59□□□□□ -0.87
ATXN3-223ENST00000553686 SLAIN2Q9P270 581 aa9.59□□□□□ -0.87
ATXN3-223ENST00000553686 ATAD2Q6PL18 1390 aa9.59□□□□□ -0.87
ATXN3-223ENST00000553686 FMN1Q68DA7 1419 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 KDM5DQ9BY66 1539 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 PPP1R12BO60237 982 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-223ENST00000553686 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
ATXN3-223ENST00000553686 UBAP2LQ14157 1087 aaKnown RBP9.58□□□□□ -0.88
ATXN3-223ENST00000553686 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 TXNDC2Q86VQ3 553 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 SCG3Q8WXD2 468 aaKnown RBP9.58□□□□□ -0.88
ATXN3-223ENST00000553686 ARXQ96QS3 562 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 ZIC5Q96T25 663 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 HCN4Q9Y3Q4 1203 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 EID1Q9Y6B2 187 aa9.58□□□□□ -0.88
ATXN3-223ENST00000553686 CDK12Q9NYV4 1490 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-223ENST00000553686 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-223ENST00000553686 KIF3BO15066 747 aa9.57□□□□□ -0.88
ATXN3-223ENST00000553686 C21orf2O43822 256 aa9.57□□□□□ -0.88
ATXN3-223ENST00000553686 SRPK2P78362 688 aaKnown RBP9.57□□□□□ -0.88
ATXN3-223ENST00000553686 SH3PXD2AQ5TCZ1 1133 aa9.57□□□□□ -0.88
ATXN3-223ENST00000553686 NLRP8Q86W28 1048 aa9.57□□□□□ -0.88
ATXN3-223ENST00000553686 ZCCHC2Q9C0B9 1178 aaKnown RBP9.57□□□□□ -0.88
ATXN3-223ENST00000553686 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
ATXN3-223ENST00000553686 PHF24Q9UPV7 400 aa9.57□□□□□ -0.88
ATXN3-223ENST00000553686 UGGT1Q9NYU2 1555 aa9.57□□□□□ -0.88
ATXN3-223ENST00000553686 MYO5CQ9NQX4 1742 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 TMEM94Q12767 1356 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 EML1O00423 815 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 KCNA6P17658 529 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 SRSF11Q05519 484 aaKnown RBP9.56□□□□□ -0.88
ATXN3-223ENST00000553686 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
ATXN3-223ENST00000553686 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 KIF14Q15058 1648 aa9.56□□□□□ -0.88
ATXN3-223ENST00000553686 PZPP20742 1482 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 DHX29Q7Z478 1369 aaKnown RBP9.55□□□□□ -0.88
ATXN3-223ENST00000553686 ADAMTS2O95450 1211 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 SLURP2P0DP57 97 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 MX2P20592 715 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 RBM6P78332 1123 aaKnown RBP9.55□□□□□ -0.88
ATXN3-223ENST00000553686 FIGNL1Q6PIW4 674 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 QTRT2Q9H974 415 aaKnown RBP9.55□□□□□ -0.88
ATXN3-223ENST00000553686 NEUROD4Q9HD90 331 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 CFDP1Q9UEE9 299 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-223ENST00000553686 PCDHGC4Q9Y5F7 938 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 DEPDC5O75140 1603 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 KIAA1107Q9UPP5 1409 aa9.55□□□□□ -0.88
ATXN3-223ENST00000553686 SYNMO15061 1565 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 FAM181BA6NEQ2 426 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 BNIP3LO60238 219 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 C7orf43Q8WVR3 580 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 NGLY1Q96IV0 654 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 KIDINS220Q9ULH0 1771 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 CLTCQ00610 1675 aaKnown RBP9.54□□□□□ -0.88
ATXN3-223ENST00000553686 SAMD9LQ8IVG5 1584 aa9.54□□□□□ -0.88
ATXN3-223ENST00000553686 LRRC9Q6ZRR7 1453 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 ATXN7O15265 892 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-223ENST00000553686 C1orf53Q5VUE5 145 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 STAG2Q8N3U4 1231 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 ABHD17AQ96GS6 310 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 C2orf49Q9BVC5 232 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-223ENST00000553686 C1orf115Q9H7X2 142 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
ATXN3-223ENST00000553686 FGD6Q6ZV73 1430 aa9.53□□□□□ -0.88
ATXN3-223ENST00000553686 SETD1AO15047 1707 aaKnown RBP9.53□□□□□ -0.88
ATXN3-223ENST00000553686 SUPT6HQ7KZ85 1726 aaKnown RBP9.53□□□□□ -0.88
ATXN3-223ENST00000553686 MSH6P52701 1360 aa9.52□□□□□ -0.88
ATXN3-223ENST00000553686 LTKP29376 864 aa9.52□□□□□ -0.89
ATXN3-223ENST00000553686 PHACTR1Q9C0D0 580 aa9.52□□□□□ -0.89
ATXN3-223ENST00000553686 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
ATXN3-223ENST00000553686 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-223ENST00000553686 PLEKHH2Q8IVE3 1493 aa9.52□□□□□ -0.89
ATXN3-223ENST00000553686 AFF2P51816 1311 aa9.52□□□□□ -0.89
ATXN3-223ENST00000553686 ATG7O95352 703 aa9.51□□□□□ -0.89
ATXN3-223ENST00000553686 HIRAP54198 1017 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-223ENST00000553686 ELOAQ14241 798 aaKnown RBP9.51□□□□□ -0.89
ATXN3-223ENST00000553686 LRRC69Q6ZNQ3 347 aa9.51□□□□□ -0.89
ATXN3-223ENST00000553686 PBXIP1Q96AQ6 731 aa9.51□□□□□ -0.89
ATXN3-223ENST00000553686 FGFR3P22607 806 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 IGFBP4P22692 258 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 CTBSQ01459 385 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-223ENST00000553686 LYPD4Q6UWN0 246 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 ALDH16A1Q8IZ83 802 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 ZMIZ1Q9ULJ6 1067 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 SCAF11Q99590 1463 aaKnown RBP9.5□□□□□ -0.89
ATXN3-223ENST00000553686 ATP7AQ04656 1500 aa9.5□□□□□ -0.89
ATXN3-223ENST00000553686 POLR1AO95602 1720 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-223ENST00000553686 WEE1P30291 646 aa9.49□□□□□ -0.89
ATXN3-223ENST00000553686 TNP2Q05952 138 aa9.49□□□□□ -0.89
ATXN3-223ENST00000553686 SVOPQ8N4V2 548 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms