RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 ZIC5Q96T25 663 aa15.5■□□□□ 0.07
HNRNPC-206ENST00000553444 UTP14AQ9BVJ6 771 aaKnown RBP15.5■□□□□ 0.07
HNRNPC-206ENST00000553444 BBOX1O75936 387 aa15.49■□□□□ 0.07
HNRNPC-206ENST00000553444 TNIP1Q15025 636 aa15.49■□□□□ 0.07
HNRNPC-206ENST00000553444 SP8Q8IXZ3 490 aa15.49■□□□□ 0.07
HNRNPC-206ENST00000553444 MPNDQ8N594 471 aa15.49■□□□□ 0.07
HNRNPC-206ENST00000553444 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
HNRNPC-206ENST00000553444 BCL2L13Q9BXK5 485 aa15.49■□□□□ 0.07
HNRNPC-206ENST00000553444 SHTN1A0MZ66 631 aa15.48■□□□□ 0.07
HNRNPC-206ENST00000553444 YDJCA8MPS7 323 aa15.47■□□□□ 0.07
HNRNPC-206ENST00000553444 HUNKP57058 714 aa15.47■□□□□ 0.07
HNRNPC-206ENST00000553444 PDIA6Q15084 440 aa15.47■□□□□ 0.07
HNRNPC-206ENST00000553444 USP48Q86UV5 1035 aa15.47■□□□□ 0.07
HNRNPC-206ENST00000553444 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
HNRNPC-206ENST00000553444 GRAPQ13588 217 aa15.46■□□□□ 0.07
HNRNPC-206ENST00000553444 DLK2Q6UY11 383 aa15.46■□□□□ 0.07
HNRNPC-206ENST00000553444 MICALL2Q8IY33 904 aa15.46■□□□□ 0.07
HNRNPC-206ENST00000553444 GRAPLQ8TC17 118 aaPredicted RBP15.46■□□□□ 0.07
HNRNPC-206ENST00000553444 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
HNRNPC-206ENST00000553444 LAMB4A4D0S4 1761 aa15.45■□□□□ 0.06
HNRNPC-206ENST00000553444 FAM155AB1AL88 458 aaPredicted RBP15.45■□□□□ 0.06
HNRNPC-206ENST00000553444 H7C1D1 291 aa15.45■□□□□ 0.06
HNRNPC-206ENST00000553444 NEFMP07197 916 aa15.45■□□□□ 0.06
HNRNPC-206ENST00000553444 HCLS1P14317 486 aaPredicted RBP15.45■□□□□ 0.06
HNRNPC-206ENST00000553444 NFE2L2Q16236 605 aa15.45■□□□□ 0.06
HNRNPC-206ENST00000553444 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
HNRNPC-206ENST00000553444 RGMBQ6NW40 437 aa15.44■□□□□ 0.06
HNRNPC-206ENST00000553444 DDX46Q7L014 1031 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-206ENST00000553444 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
HNRNPC-206ENST00000553444 DPF2Q92785 391 aa15.44■□□□□ 0.06
HNRNPC-206ENST00000553444 SAGE1Q9NXZ1 904 aa15.44■□□□□ 0.06
HNRNPC-206ENST00000553444 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
HNRNPC-206ENST00000553444 ANXA1P04083 346 aa15.43■□□□□ 0.06
HNRNPC-206ENST00000553444 HSP90AB3PQ58FF7 597 aa15.43■□□□□ 0.06
HNRNPC-206ENST00000553444 SAMD7Q7Z3H4 446 aa15.43■□□□□ 0.06
HNRNPC-206ENST00000553444 GBA2Q9HCG7 927 aaPredicted RBP15.43■□□□□ 0.06
HNRNPC-206ENST00000553444 TRPM7Q96QT4 1865 aa15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 PSMD14O00487 310 aa15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 EGFRP00533 1210 aa15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 EIF2S2P20042 333 aaKnown RBP15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 KRT26Q7Z3Y9 468 aa15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 TSPYL4Q9UJ04 414 aa15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 SH3TC1Q8TE82 1336 aa15.42■□□□□ 0.06
HNRNPC-206ENST00000553444 SOX10P56693 466 aa15.41■□□□□ 0.06
HNRNPC-206ENST00000553444 KIF23Q02241 960 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-206ENST00000553444 TBC1D10BQ4KMP7 808 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-206ENST00000553444 CCDC102AQ96A19 550 aa15.41■□□□□ 0.06
HNRNPC-206ENST00000553444 TRMT112Q9UI30 125 aaKnown RBP15.41■□□□□ 0.06
HNRNPC-206ENST00000553444 KDM3BQ7LBC6 1761 aa15.41■□□□□ 0.06
HNRNPC-206ENST00000553444 DUOX1Q9NRD9 1551 aa15.41■□□□□ 0.06
HNRNPC-206ENST00000553444 ADM5C9JUS6 153 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 TCIRG1Q13488 830 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 COPS6Q7L5N1 327 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 C2orf69Q8N8R5 385 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 XAGE3Q8WTP9 111 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 RNF186Q9NXI6 227 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 NUP98P52948 1817 aa15.4■□□□□ 0.06
HNRNPC-206ENST00000553444 PDE4DIPQ5VU43 2346 aa15.39■□□□□ 0.05
HNRNPC-206ENST00000553444 RPS12P25398 132 aaKnown RBP15.39■□□□□ 0.05
HNRNPC-206ENST00000553444 ZNF157P51786 506 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-206ENST00000553444 WASHC4Q2M389 1173 aa15.39■□□□□ 0.05
HNRNPC-206ENST00000553444 TRPA1O75762 1119 aa15.38■□□□□ 0.05
HNRNPC-206ENST00000553444 SLC10A3P09131 477 aa15.38■□□□□ 0.05
HNRNPC-206ENST00000553444 AIMP1Q12904 312 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-206ENST00000553444 DCPSQ96C86 337 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-206ENST00000553444 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
HNRNPC-206ENST00000553444 RTL9Q8NET4 1388 aa15.37■□□□□ 0.05
HNRNPC-206ENST00000553444 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-206ENST00000553444 CELF1Q92879 486 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-206ENST00000553444 BABAM1Q9NWV8 329 aa15.37■□□□□ 0.05
HNRNPC-206ENST00000553444 POLLQ9UGP5 575 aa15.37■□□□□ 0.05
HNRNPC-206ENST00000553444 NSFL1CQ9UNZ2 370 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-206ENST00000553444 CASP8AP2Q9UKL3 1982 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 RIMBP2O15034 1052 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 ECE2O60344 883 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 GPSM2P81274 684 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 SF3B3Q15393 1217 aaKnown RBP15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 KIF4BQ2VIQ3 1234 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 CTU1Q7Z7A3 348 aaKnown RBP15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 NECTIN2Q92692 538 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 CSRNP1Q96S65 589 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 KCNQ5Q9NR82 932 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 GGA3Q9NZ52 723 aa15.36■□□□□ 0.05
HNRNPC-206ENST00000553444 C6orf229H3BNL8 230 aa15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 DOK7Q18PE1 504 aa15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 PRPF38BQ5VTL8 546 aaKnown RBP15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 SULF1Q8IWU6 871 aa15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 EYA3Q99504 573 aa15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 PNNQ9H307 717 aaKnown RBP15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 ASTN2O75129 1339 aaPredicted RBP15.35■□□□□ 0.05
HNRNPC-206ENST00000553444 VIL1P09327 827 aaKnown RBP15.34■□□□□ 0.05
HNRNPC-206ENST00000553444 CDCA5Q96FF9 252 aa15.34■□□□□ 0.05
HNRNPC-206ENST00000553444 TNRC18O15417 2968 aaPredicted RBP15.33■□□□□ 0.04
HNRNPC-206ENST00000553444 RIPK4P57078 832 aa15.33■□□□□ 0.04
HNRNPC-206ENST00000553444 RASAL3Q86YV0 1011 aa15.33■□□□□ 0.04
HNRNPC-206ENST00000553444 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms