RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
SYNE2-209ENST00000553308 HIRAP54198 1017 aaPredicted RBP11.98□□□□□ -0.49
SYNE2-209ENST00000553308 KIAA2012Q0VF49 1180 aa11.98□□□□□ -0.49
SYNE2-209ENST00000553308 CIAPIN1Q6FI81 312 aa11.98□□□□□ -0.49
SYNE2-209ENST00000553308 TRPM4Q8TD43 1214 aa11.98□□□□□ -0.49
SYNE2-209ENST00000553308 BCL2L13Q9BXK5 485 aa11.98□□□□□ -0.49
SYNE2-209ENST00000553308 TAF1P21675 1872 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 CDHR2Q9BYE9 1310 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 MAPK8IP3Q9UPT6 1336 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 YDJCA8MPS7 323 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 MLLT1Q03111 559 aaPredicted RBP11.97□□□□□ -0.49
SYNE2-209ENST00000553308 SP8Q8IXZ3 490 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 MPNDQ8N594 471 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 HHIPL1Q96JK4 782 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 PGAP2Q9UHJ9 254 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 LRRC37AA6NMS7 1700 aa11.97□□□□□ -0.49
SYNE2-209ENST00000553308 BBOX1O75936 387 aa11.96□□□□□ -0.49
SYNE2-209ENST00000553308 RGS19P49795 217 aa11.96□□□□□ -0.49
SYNE2-209ENST00000553308 BRPF1P55201 1214 aaPredicted RBP11.96□□□□□ -0.49
SYNE2-209ENST00000553308 AIMP1Q12904 312 aaKnown RBP11.96□□□□□ -0.49
SYNE2-209ENST00000553308 NLRP10Q86W26 655 aa11.96□□□□□ -0.49
SYNE2-209ENST00000553308 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
SYNE2-209ENST00000553308 ZNF428Q96B54 188 aa11.96□□□□□ -0.49
SYNE2-209ENST00000553308 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
SYNE2-209ENST00000553308 CA12O43570 354 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 GRAPQ13588 217 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 TNIP1Q15025 636 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 DLK2Q6UY11 383 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 DDX46Q7L014 1031 aaKnown RBP11.95□□□□□ -0.5
SYNE2-209ENST00000553308 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 GRAPLQ8TC17 118 aaPredicted RBP11.95□□□□□ -0.5
SYNE2-209ENST00000553308 XAGE3Q8WTP9 111 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 ZC3H15Q8WU90 426 aaKnown RBP11.95□□□□□ -0.5
SYNE2-209ENST00000553308 ZIC5Q96T25 663 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 CNOT7Q9UIV1 285 aaKnown RBP11.95□□□□□ -0.5
SYNE2-209ENST00000553308 CASP8AP2Q9UKL3 1982 aa11.95□□□□□ -0.5
SYNE2-209ENST00000553308 DDX60Q8IY21 1712 aaKnown RBP11.94□□□□□ -0.5
SYNE2-209ENST00000553308 COL4A1P02462 1669 aa11.94□□□□□ -0.5
SYNE2-209ENST00000553308 SH3TC1Q8TE82 1336 aa11.94□□□□□ -0.5
SYNE2-209ENST00000553308 HSP90AB3PQ58FF7 597 aa11.94□□□□□ -0.5
SYNE2-209ENST00000553308 CDC37L1Q7L3B6 337 aa11.94□□□□□ -0.5
SYNE2-209ENST00000553308 USP48Q86UV5 1035 aa11.94□□□□□ -0.5
SYNE2-209ENST00000553308 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
SYNE2-209ENST00000553308 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
SYNE2-209ENST00000553308 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
SYNE2-209ENST00000553308 RIPK4P57078 832 aa11.93□□□□□ -0.5
SYNE2-209ENST00000553308 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
SYNE2-209ENST00000553308 DGKZQ13574 1117 aa11.93□□□□□ -0.5
SYNE2-209ENST00000553308 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
SYNE2-209ENST00000553308 SAMD7Q7Z3H4 446 aa11.93□□□□□ -0.5
SYNE2-209ENST00000553308 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
SYNE2-209ENST00000553308 H7C1D1 291 aa11.92□□□□□ -0.5
SYNE2-209ENST00000553308 PSMD14O00487 310 aa11.92□□□□□ -0.5
SYNE2-209ENST00000553308 EGFRP00533 1210 aa11.92□□□□□ -0.5
SYNE2-209ENST00000553308 HUNKP57058 714 aa11.92□□□□□ -0.5
SYNE2-209ENST00000553308 NOGQ13253 232 aa11.92□□□□□ -0.5
SYNE2-209ENST00000553308 DBNDD1Q9H9R9 158 aa11.92□□□□□ -0.5
SYNE2-209ENST00000553308 WASHC4Q2M389 1173 aa11.91□□□□□ -0.5
SYNE2-209ENST00000553308 TBC1D10BQ4KMP7 808 aaPredicted RBP11.91□□□□□ -0.5
SYNE2-209ENST00000553308 TMC4Q7Z404 712 aa11.91□□□□□ -0.5
SYNE2-209ENST00000553308 CELF1Q92879 486 aaKnown RBP11.91□□□□□ -0.5
SYNE2-209ENST00000553308 BABAM1Q9NWV8 329 aa11.91□□□□□ -0.5
SYNE2-209ENST00000553308 RTL9Q8NET4 1388 aa11.91□□□□□ -0.5
SYNE2-209ENST00000553308 FAM155AB1AL88 458 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-209ENST00000553308 ADM5C9JUS6 153 aa11.9□□□□□ -0.5
SYNE2-209ENST00000553308 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
SYNE2-209ENST00000553308 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
SYNE2-209ENST00000553308 KRT26Q7Z3Y9 468 aa11.9□□□□□ -0.5
SYNE2-209ENST00000553308 DPF2Q92785 391 aa11.9□□□□□ -0.5
SYNE2-209ENST00000553308 GBA2Q9HCG7 927 aaPredicted RBP11.9□□□□□ -0.5
SYNE2-209ENST00000553308 CHPF2Q9P2E5 772 aa11.9□□□□□ -0.5
SYNE2-209ENST00000553308 POLLQ9UGP5 575 aa11.9□□□□□ -0.5
SYNE2-209ENST00000553308 NSFL1CQ9UNZ2 370 aaKnown RBP11.9□□□□□ -0.5
SYNE2-209ENST00000553308 C6orf229H3BNL8 230 aa11.89□□□□□ -0.51
SYNE2-209ENST00000553308 ECE2O60344 883 aa11.89□□□□□ -0.51
SYNE2-209ENST00000553308 GPSM2P81274 684 aa11.89□□□□□ -0.51
SYNE2-209ENST00000553308 LMOD3Q0VAK6 560 aa11.89□□□□□ -0.51
SYNE2-209ENST00000553308 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
SYNE2-209ENST00000553308 RGMBQ6NW40 437 aa11.89□□□□□ -0.51
SYNE2-209ENST00000553308 FAM89AQ96GI7 184 aa11.89□□□□□ -0.51
SYNE2-209ENST00000553308 KCNQ5Q9NR82 932 aa11.89□□□□□ -0.51
SYNE2-209ENST00000553308 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
SYNE2-209ENST00000553308 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
SYNE2-209ENST00000553308 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
SYNE2-209ENST00000553308 RTL5Q5HYW3 569 aaPredicted RBP11.88□□□□□ -0.51
SYNE2-209ENST00000553308 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
SYNE2-209ENST00000553308 ISCA1Q9BUE6 129 aa11.88□□□□□ -0.51
SYNE2-209ENST00000553308 POLR2AP24928 1970 aaKnown RBP11.88□□□□□ -0.51
SYNE2-209ENST00000553308 SCN9AQ15858 1988 aa11.88□□□□□ -0.51
SYNE2-209ENST00000553308 ASTN2O75129 1339 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-209ENST00000553308 CHL1O00533 1208 aa11.87□□□□□ -0.51
SYNE2-209ENST00000553308 RPS12P25398 132 aaKnown RBP11.87□□□□□ -0.51
SYNE2-209ENST00000553308 KIF23Q02241 960 aaPredicted RBP11.87□□□□□ -0.51
SYNE2-209ENST00000553308 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
SYNE2-209ENST00000553308 KIF4BQ2VIQ3 1234 aa11.87□□□□□ -0.51
SYNE2-209ENST00000553308 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
SYNE2-209ENST00000553308 CCDC146Q8IYE0 955 aa11.87□□□□□ -0.51
SYNE2-209ENST00000553308 C2orf69Q8N8R5 385 aa11.87□□□□□ -0.51
SYNE2-209ENST00000553308 DCPSQ96C86 337 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms