RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 RIOK3O14730 519 aaKnown RBP8.61□□□□□ -1.03
LINC02406-201ENST00000553029 FKTNO75072 461 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 ALDH1B1P30837 517 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 GMPSP49915 693 aaPredicted RBP8.61□□□□□ -1.03
LINC02406-201ENST00000553029 HIRAP54198 1017 aaPredicted RBP8.61□□□□□ -1.03
LINC02406-201ENST00000553029 AMOTQ4VCS5 1084 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 C1orf141Q5JVX7 400 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 DLK2Q6UY11 383 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 RASAL3Q86YV0 1011 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 HTTP42858 3142 aa8.61□□□□□ -1.03
LINC02406-201ENST00000553029 NBPF5PQ86XG9 351 aaPredicted RBP8.6□□□□□ -1.03
LINC02406-201ENST00000553029 TBC1D2BQ9UPU7 963 aa8.6□□□□□ -1.03
LINC02406-201ENST00000553029 TRIM17Q9Y577 477 aa8.6□□□□□ -1.03
LINC02406-201ENST00000553029 NPC1L1Q9UHC9 1359 aa8.6□□□□□ -1.03
LINC02406-201ENST00000553029 KRT26Q7Z3Y9 468 aa8.59□□□□□ -1.03
LINC02406-201ENST00000553029 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
LINC02406-201ENST00000553029 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
LINC02406-201ENST00000553029 BCL2L13Q9BXK5 485 aa8.59□□□□□ -1.03
LINC02406-201ENST00000553029 ZNF330Q9Y3S2 320 aaPredicted RBP8.59□□□□□ -1.03
LINC02406-201ENST00000553029 PPIP5K2O43314 1243 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 STARD3NLO95772 234 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 CXCL9Q07325 125 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 GRIPAP1Q4V328 841 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
LINC02406-201ENST00000553029 SLAIN1Q8ND83 568 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 ARMC5Q96C12 935 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 SCN7AQ01118 1682 aa8.58□□□□□ -1.04
LINC02406-201ENST00000553029 ANKRD26Q9UPS8 1709 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.57□□□□□ -1.04
LINC02406-201ENST00000553029 ADM5C9JUS6 153 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 SLC39A6Q13433 755 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 EIF4A2Q14240 407 aaKnown RBP8.57□□□□□ -1.04
LINC02406-201ENST00000553029 OTOP1Q7RTM1 612 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 ZFP91Q96JP5 570 aaPredicted RBP8.57□□□□□ -1.04
LINC02406-201ENST00000553029 PRO3102Q9H379 93 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 SLC52A2Q9HAB3 445 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 ZNRF3Q9ULT6 936 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 STXBP5LQ9Y2K9 1186 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 UNC80Q8N2C7 3258 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 MRC1P22897 1456 aa8.57□□□□□ -1.04
LINC02406-201ENST00000553029 A0A1W2PPC1 479 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 POTEMA6NI47 508 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 H7C1D1 291 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 SOX1O00570 391 aaPredicted RBP8.56□□□□□ -1.04
LINC02406-201ENST00000553029 COL9A1P20849 921 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 IL6STP40189 918 aaPredicted RBP8.56□□□□□ -1.04
LINC02406-201ENST00000553029 AOC3Q16853 763 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 POTEGQ6S5H5 508 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC02406-201ENST00000553029 EFCAB3Q8N7B9 438 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 LRCH3Q96II8 777 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 CFHR5Q9BXR6 569 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 LAMA3Q16787 3333 aa8.56□□□□□ -1.04
LINC02406-201ENST00000553029 TPTE2Q6XPS3 522 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 ANKRD13DQ6ZTN6 518 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 MICALL2Q8IY33 904 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 DCPSQ96C86 337 aaKnown RBP8.55□□□□□ -1.04
LINC02406-201ENST00000553029 CARD11Q9BXL7 1154 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 CNOT7Q9UIV1 285 aaKnown RBP8.55□□□□□ -1.04
LINC02406-201ENST00000553029 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 CACNA1SQ13698 1873 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 CENPFP49454 3210 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 VCANP13611 3396 aa8.55□□□□□ -1.04
LINC02406-201ENST00000553029 SHTN1A0MZ66 631 aa8.54□□□□□ -1.04
LINC02406-201ENST00000553029 TM4SF4P48230 202 aa8.54□□□□□ -1.04
LINC02406-201ENST00000553029 FKBP1BP68106 108 aa8.54□□□□□ -1.04
LINC02406-201ENST00000553029 SREBF2Q12772 1141 aa8.54□□□□□ -1.04
LINC02406-201ENST00000553029 TNIP1Q15025 636 aa8.54□□□□□ -1.04
LINC02406-201ENST00000553029 VPS33BQ9H267 617 aa8.54□□□□□ -1.04
LINC02406-201ENST00000553029 RAD17O75943 681 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 PLA2G5P39877 138 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 SLC4A8Q2Y0W8 1093 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 CRY2Q49AN0 593 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 SAMD7Q7Z3H4 446 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 DZIP3Q86Y13 1208 aaKnown RBP8.53□□□□□ -1.04
LINC02406-201ENST00000553029 SULF1Q8IWU6 871 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 DPF3Q92784 378 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 ZNF333Q96JL9 665 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 MS4A4AQ96JQ5 239 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 TMEM121BQ9BXQ6 578 aaPredicted RBP8.53□□□□□ -1.04
LINC02406-201ENST00000553029 R3HDMLQ9H3Y0 253 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.53□□□□□ -1.04
LINC02406-201ENST00000553029 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 PAPPA2Q9BXP8 1791 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 ERBB4Q15303 1308 aa8.53□□□□□ -1.04
LINC02406-201ENST00000553029 AKAP11Q9UKA4 1901 aa8.52□□□□□ -1.04
LINC02406-201ENST00000553029 PPEF1O14829 653 aaPredicted RBP8.52□□□□□ -1.05
LINC02406-201ENST00000553029 TBC1D10BQ4KMP7 808 aaPredicted RBP8.52□□□□□ -1.05
LINC02406-201ENST00000553029 GPR153Q6NV75 609 aa8.52□□□□□ -1.05
LINC02406-201ENST00000553029 CLEC4GQ6UXB4 293 aa8.52□□□□□ -1.05
LINC02406-201ENST00000553029 DEFB123Q8N688 67 aa8.52□□□□□ -1.05
LINC02406-201ENST00000553029 RPGRQ92834 1020 aaKnown RBP8.52□□□□□ -1.05
LINC02406-201ENST00000553029 CDCA5Q96FF9 252 aa8.52□□□□□ -1.05
LINC02406-201ENST00000553029 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.05
LINC02406-201ENST00000553029 POLKQ9UBT6 870 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms