RNA–Protein interactions for RNA: ENST00000553019.1

EEA1-205, Transcript of early endosome antigen 1, humanhuman

TSL 5

Gene EEA1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-205ENST00000553019 SF3B3Q15393 1217 aaKnown RBP23.77■■□□□ 1.4
EEA1-205ENST00000553019 FHDC1Q9C0D6 1143 aaPredicted RBP23.77■■□□□ 1.4
EEA1-205ENST00000553019 NPHP1O15259 732 aa23.76■■□□□ 1.39
EEA1-205ENST00000553019 GNAI3P08754 354 aa23.76■■□□□ 1.39
EEA1-205ENST00000553019 CACNA1SQ13698 1873 aa23.76■■□□□ 1.39
EEA1-205ENST00000553019 DPEP1P16444 411 aa23.75■■□□□ 1.39
EEA1-205ENST00000553019 LMBR1LQ6UX01 489 aa23.75■■□□□ 1.39
EEA1-205ENST00000553019 GREM2Q9H772 168 aa23.75■■□□□ 1.39
EEA1-205ENST00000553019 SEC31BQ9NQW1 1179 aa23.75■■□□□ 1.39
EEA1-205ENST00000553019 A0A0G2JLW4 131 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 SRGNP10124 158 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 FAM161AQ3B820 660 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 C2CD5Q86YS7 1000 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 KLHL34Q8N239 644 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 NLRP3Q96P20 1036 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 CD2APQ9Y5K6 639 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 SPEF2Q9C093 1822 aa23.74■■□□□ 1.39
EEA1-205ENST00000553019 GNAI2P04899 355 aa23.73■■□□□ 1.39
EEA1-205ENST00000553019 SIRT2Q8IXJ6 389 aa23.73■■□□□ 1.39
EEA1-205ENST00000553019 PPP1R1BQ9UD71 204 aaPredicted RBP23.73■■□□□ 1.39
EEA1-205ENST00000553019 SLX4Q8IY92 1834 aa23.73■■□□□ 1.39
EEA1-205ENST00000553019 RFX5P48382 616 aaPredicted RBP23.72■■□□□ 1.39
EEA1-205ENST00000553019 RTL9Q8NET4 1388 aa23.71■■□□□ 1.39
EEA1-205ENST00000553019 PNMA6EA0A0J9YXQ4 647 aa23.71■■□□□ 1.39
EEA1-205ENST00000553019 HOXA10P31260 410 aaPredicted RBP23.71■■□□□ 1.39
EEA1-205ENST00000553019 PDE6BP35913 854 aa23.71■■□□□ 1.39
EEA1-205ENST00000553019 CEP85Q6P2H3 762 aa23.71■■□□□ 1.39
EEA1-205ENST00000553019 PCDHB15Q9Y5E8 787 aa23.71■■□□□ 1.39
EEA1-205ENST00000553019 MTX1Q13505 466 aa23.7■■□□□ 1.38
EEA1-205ENST00000553019 CELF1Q92879 486 aaKnown RBP23.7■■□□□ 1.38
EEA1-205ENST00000553019 SYT17Q9BSW7 474 aa23.7■■□□□ 1.38
EEA1-205ENST00000553019 ZNF594Q96JF6 807 aaPredicted RBP23.69■■□□□ 1.38
EEA1-205ENST00000553019 TGFB2P61812 414 aa23.68■■□□□ 1.38
EEA1-205ENST00000553019 KLHDC4Q8TBB5 520 aa23.68■■□□□ 1.38
EEA1-205ENST00000553019 WWC3Q9ULE0 1092 aa23.68■■□□□ 1.38
EEA1-205ENST00000553019 H0YIN7 160 aa23.67■■□□□ 1.38
EEA1-205ENST00000553019 NPR1P16066 1061 aa23.67■■□□□ 1.38
EEA1-205ENST00000553019 ITGA6P23229 1130 aa23.67■■□□□ 1.38
EEA1-205ENST00000553019 CCDC152Q4G0S7 254 aa23.67■■□□□ 1.38
EEA1-205ENST00000553019 MASTLQ96GX5 879 aa23.67■■□□□ 1.38
EEA1-205ENST00000553019 A0A1B0GUL6 1792 aa23.66■■□□□ 1.38
EEA1-205ENST00000553019 ATP8B2P98198 1209 aa23.66■■□□□ 1.38
EEA1-205ENST00000553019 POLA2Q14181 598 aa23.66■■□□□ 1.38
EEA1-205ENST00000553019 STYK1Q6J9G0 422 aa23.66■■□□□ 1.38
EEA1-205ENST00000553019 LRRC37AA6NMS7 1700 aa23.66■■□□□ 1.38
EEA1-205ENST00000553019 OLFM4Q6UX06 510 aa23.65■■□□□ 1.38
EEA1-205ENST00000553019 RPGRQ92834 1020 aaKnown RBP23.65■■□□□ 1.38
EEA1-205ENST00000553019 ZNF622Q969S3 477 aaKnown RBP eCLIP23.65■■□□□ 1.382e-6■■■□□ 17.8
EEA1-205ENST00000553019 CRAMP1Q96RY5 1269 aa23.65■■□□□ 1.38
EEA1-205ENST00000553019 PA2G4Q9UQ80 394 aaKnown RBP23.65■■□□□ 1.38
EEA1-205ENST00000553019 CHMP3Q9Y3E7 222 aa23.65■■□□□ 1.38
EEA1-205ENST00000553019 HSP90B1P14625 803 aaKnown RBP23.64■■□□□ 1.37
EEA1-205ENST00000553019 PTPN12Q05209 780 aaKnown RBP23.64■■□□□ 1.37
EEA1-205ENST00000553019 SSH3Q8TE77 659 aa23.64■■□□□ 1.37
EEA1-205ENST00000553019 PUS3Q9BZE2 481 aaKnown RBP23.64■■□□□ 1.37
EEA1-205ENST00000553019 GRAPQ13588 217 aa23.63■■□□□ 1.37
EEA1-205ENST00000553019 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
EEA1-205ENST00000553019 SNED1Q8TER0 1413 aa23.63■■□□□ 1.37
EEA1-205ENST00000553019 RBM17Q96I25 401 aaKnown RBP23.63■■□□□ 1.37
EEA1-205ENST00000553019 SRGAP3O43295 1099 aa23.62■■□□□ 1.37
EEA1-205ENST00000553019 DDX46Q7L014 1031 aaKnown RBP23.62■■□□□ 1.37
EEA1-205ENST00000553019 C7orf43Q8WVR3 580 aa23.62■■□□□ 1.37
EEA1-205ENST00000553019 PDZRN3Q9UPQ7 1066 aa23.62■■□□□ 1.37
EEA1-205ENST00000553019 LTBP1Q14766 1721 aa23.62■■□□□ 1.37
EEA1-205ENST00000553019 PRPF40BQ6NWY9 871 aaKnown RBP23.61■■□□□ 1.37
EEA1-205ENST00000553019 ANKRD18BA2A2Z9 1011 aa23.6■■□□□ 1.37
EEA1-205ENST00000553019 IFIT5Q13325 482 aaKnown RBP23.6■■□□□ 1.37
EEA1-205ENST00000553019 LRRC24Q50LG9 513 aa23.6■■□□□ 1.37
EEA1-205ENST00000553019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.6■■□□□ 1.37
EEA1-205ENST00000553019 ARFGEF1Q9Y6D6 1849 aa23.6■■□□□ 1.37
EEA1-205ENST00000553019 RPS8P62241 208 aaKnown RBP23.59■■□□□ 1.37
EEA1-205ENST00000553019 RPAP2Q8IXW5 612 aaPredicted RBP23.59■■□□□ 1.37
EEA1-205ENST00000553019 CHMP4BQ9H444 224 aaKnown RBP23.59■■□□□ 1.37
EEA1-205ENST00000553019 HDAC5Q9UQL6 1122 aa23.59■■□□□ 1.37
EEA1-205ENST00000553019 DUOX1Q9NRD9 1551 aa23.58■■□□□ 1.37
EEA1-205ENST00000553019 CCDC57Q2TAC2 916 aa23.58■■□□□ 1.37
EEA1-205ENST00000553019 ATG9AQ7Z3C6 839 aa23.58■■□□□ 1.37
EEA1-205ENST00000553019 CNKSR1Q969H4 720 aa23.58■■□□□ 1.37
EEA1-205ENST00000553019 COPRSQ9NQ92 184 aa23.58■■□□□ 1.37
EEA1-205ENST00000553019 PIM2Q9P1W9 311 aa23.58■■□□□ 1.37
EEA1-205ENST00000553019 GOLGB1Q14789 3259 aaKnown RBP23.57■■□□□ 1.36
EEA1-205ENST00000553019 WTIPA6NIX2 430 aaPredicted RBP23.57■■□□□ 1.36
EEA1-205ENST00000553019 PPEF1O14829 653 aaPredicted RBP23.57■■□□□ 1.36
EEA1-205ENST00000553019 ANKRD18AQ8IVF6 992 aa23.57■■□□□ 1.36
EEA1-205ENST00000553019 TTLL6Q8N841 843 aa23.57■■□□□ 1.36
EEA1-205ENST00000553019 ZNF219Q9P2Y4 722 aaPredicted RBP23.57■■□□□ 1.36
EEA1-205ENST00000553019 IGHDP01880 384 aa23.56■■□□□ 1.36
EEA1-205ENST00000553019 YBX3P16989 372 aaKnown RBP eCLIP23.56■■□□□ 1.36
EEA1-205ENST00000553019 ALDH1B1P30837 517 aa23.56■■□□□ 1.36
EEA1-205ENST00000553019 CDC5LQ99459 802 aaKnown RBP23.56■■□□□ 1.36
EEA1-205ENST00000553019 SIL1Q9H173 461 aa23.56■■□□□ 1.36
EEA1-205ENST00000553019 RIPOR2Q9Y4F9 1068 aa23.56■■□□□ 1.36
EEA1-205ENST00000553019 C21orf2O43822 256 aa23.54■■□□□ 1.36
EEA1-205ENST00000553019 BBOX1O75936 387 aa23.54■■□□□ 1.36
EEA1-205ENST00000553019 BSDC1Q9NW68 430 aaPredicted RBP23.54■■□□□ 1.36
EEA1-205ENST00000553019 MINPP1Q9UNW1 487 aa23.54■■□□□ 1.36
EEA1-205ENST00000553019 ATP6V0A2Q9Y487 856 aa23.54■■□□□ 1.36
EEA1-205ENST00000553019 FER1L6Q2WGJ9 1857 aa23.53■■□□□ 1.36
EEA1-205ENST00000553019 SNAP23O00161 211 aa23.53■■□□□ 1.36
EEA1-205ENST00000553019 EYA2O00167 538 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms