RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 ABCC4O15439 1325 aa14.87□□□□□ -0.03
TRAFD1-209ENST00000552896 CAPN15O75808 1086 aa14.86□□□□□ -0.03
TRAFD1-209ENST00000552896 SF3B3Q15393 1217 aaKnown RBP14.86□□□□□ -0.03
TRAFD1-209ENST00000552896 UBE3BQ7Z3V4 1068 aa14.86□□□□□ -0.03
TRAFD1-209ENST00000552896 SRCIN1Q9C0H9 1055 aa14.86□□□□□ -0.03
TRAFD1-209ENST00000552896 LTBP3Q9NS15 1303 aa14.86□□□□□ -0.03
TRAFD1-209ENST00000552896 H7C1W4 665 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 C21orf2O43822 256 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 PDE8AO60658 829 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 CCDC93Q567U6 631 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 SLC4A10Q6U841 1118 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 ARHGAP27Q6ZUM4 889 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 C7orf43Q8WVR3 580 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 DUOX1Q9NRD9 1551 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 RTL9Q8NET4 1388 aa14.85□□□□□ -0.03
TRAFD1-209ENST00000552896 PPEF1O14829 653 aaPredicted RBP14.84□□□□□ -0.03
TRAFD1-209ENST00000552896 CASP7P55210 303 aa14.84□□□□□ -0.03
TRAFD1-209ENST00000552896 CTSWP56202 376 aa14.84□□□□□ -0.03
TRAFD1-209ENST00000552896 DDX46Q7L014 1031 aaKnown RBP14.84□□□□□ -0.03
TRAFD1-209ENST00000552896 ARHGAP45Q92619 1136 aa14.84□□□□□ -0.03
TRAFD1-209ENST00000552896 PLA2G12BQ9BX93 195 aa14.84□□□□□ -0.03
TRAFD1-209ENST00000552896 API5Q9BZZ5 524 aaKnown RBP14.84□□□□□ -0.03
TRAFD1-209ENST00000552896 NFKBIEO00221 500 aa14.83□□□□□ -0.04
TRAFD1-209ENST00000552896 GRM8O00222 908 aa14.83□□□□□ -0.04
TRAFD1-209ENST00000552896 GRAPQ13588 217 aa14.83□□□□□ -0.04
TRAFD1-209ENST00000552896 CCDC152Q4G0S7 254 aa14.83□□□□□ -0.04
TRAFD1-209ENST00000552896 CC2D2BQ6DHV5 1058 aa14.83□□□□□ -0.04
TRAFD1-209ENST00000552896 GRAPLQ8TC17 118 aaPredicted RBP14.83□□□□□ -0.04
TRAFD1-209ENST00000552896 NOB1Q9ULX3 412 aaKnown RBP14.83□□□□□ -0.04
TRAFD1-209ENST00000552896 YY1P25490 414 aa14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 RASSF7Q02833 373 aa14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 GRIPAP1Q4V328 841 aa14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 TMC4Q7Z404 712 aa14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 JARID2Q92833 1246 aaPredicted RBP14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 TAOK3Q9H2K8 898 aa14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 UTYO14607 1347 aa14.82□□□□□ -0.04
TRAFD1-209ENST00000552896 IPO8O15397 1037 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-209ENST00000552896 RTKN2Q8IZC4 609 aa14.81□□□□□ -0.04
TRAFD1-209ENST00000552896 ZC3H4Q9UPT8 1303 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-209ENST00000552896 PSME4Q14997 1843 aa14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 BCAR3O75815 825 aa14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 BBOX1O75936 387 aa14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 LMNB1P20700 586 aa14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 CCT4P50991 539 aaKnown RBP14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 TTLL11Q8NHH1 800 aa14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 C9orf78Q9NZ63 289 aaPredicted RBP14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 ATP6V0A2Q9Y487 856 aa14.8□□□□□ -0.04
TRAFD1-209ENST00000552896 TRIM27P14373 513 aa14.79□□□□□ -0.04
TRAFD1-209ENST00000552896 FKBP4Q02790 459 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAFD1-209ENST00000552896 OLFM4Q6UX06 510 aa14.79□□□□□ -0.04
TRAFD1-209ENST00000552896 ATF7IPQ6VMQ6 1270 aa14.79□□□□□ -0.04
TRAFD1-209ENST00000552896 PSMD1Q99460 953 aa14.79□□□□□ -0.04
TRAFD1-209ENST00000552896 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
TRAFD1-209ENST00000552896 SP8Q8IXZ3 490 aa14.78□□□□□ -0.04
TRAFD1-209ENST00000552896 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
TRAFD1-209ENST00000552896 CDC5LQ99459 802 aaKnown RBP14.78□□□□□ -0.04
TRAFD1-209ENST00000552896 TMX4Q9H1E5 349 aaPredicted RBP14.78□□□□□ -0.04
TRAFD1-209ENST00000552896 GREM2Q9H772 168 aa14.78□□□□□ -0.04
TRAFD1-209ENST00000552896 RNF181Q9P0P0 153 aa14.78□□□□□ -0.04
TRAFD1-209ENST00000552896 CSF1RP07333 972 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 PRELPP51888 382 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 FOXO4P98177 505 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 FAM161AQ3B820 660 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 ZKSCAN2Q63HK3 967 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 SLC51AQ86UW1 340 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 FRAT1Q92837 279 aaPredicted RBP14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 SEC31BQ9NQW1 1179 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 WDR90Q96KV7 1748 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 COL4A5P29400 1685 aa14.77□□□□□ -0.05
TRAFD1-209ENST00000552896 NBPF7P0C2Y1 421 aaPredicted RBP14.76□□□□□ -0.05
TRAFD1-209ENST00000552896 RPS8P62241 208 aaKnown RBP14.76□□□□□ -0.05
TRAFD1-209ENST00000552896 INTS3Q68E01 1043 aaKnown RBP14.76□□□□□ -0.05
TRAFD1-209ENST00000552896 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
TRAFD1-209ENST00000552896 CCDC85AQ96PX6 553 aaPredicted RBP14.76□□□□□ -0.05
TRAFD1-209ENST00000552896 SCN4AP35499 1836 aa14.76□□□□□ -0.05
TRAFD1-209ENST00000552896 ITGA6P23229 1130 aa14.75□□□□□ -0.05
TRAFD1-209ENST00000552896 DSG3P32926 999 aa14.75□□□□□ -0.05
TRAFD1-209ENST00000552896 SUCLG2Q96I99 432 aa14.75□□□□□ -0.05
TRAFD1-209ENST00000552896 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
TRAFD1-209ENST00000552896 RTFDC1Q9BY42 306 aaPredicted RBP14.75□□□□□ -0.05
TRAFD1-209ENST00000552896 USP44Q9H0E7 712 aa14.75□□□□□ -0.05
TRAFD1-209ENST00000552896 ZNF646O15015 1829 aaPredicted RBP14.75□□□□□ -0.05
TRAFD1-209ENST00000552896 RABL6Q3YEC7 729 aaPredicted RBP14.74□□□□□ -0.05
TRAFD1-209ENST00000552896 EPHA10Q5JZY3 1008 aa14.74□□□□□ -0.05
TRAFD1-209ENST00000552896 DPP8Q6V1X1 898 aaPredicted RBP14.74□□□□□ -0.05
TRAFD1-209ENST00000552896 SUPT20HQ8NEM7 779 aa14.74□□□□□ -0.05
TRAFD1-209ENST00000552896 KAZALD1Q96I82 304 aa14.74□□□□□ -0.05
TRAFD1-209ENST00000552896 ZNF277Q9NRM2 450 aaPredicted RBP14.74□□□□□ -0.05
TRAFD1-209ENST00000552896 RCAN3Q9UKA8 241 aa14.74□□□□□ -0.05
TRAFD1-209ENST00000552896 UBTFL1P0CB47 393 aaPredicted RBP14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 IARSP41252 1262 aaKnown RBP14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 LMBR1LQ6UX01 489 aa14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 FTSJ3Q8IY81 847 aaKnown RBP14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 MPNDQ8N594 471 aa14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 ZNF784Q8NCA9 323 aaPredicted RBP14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 BICC1Q9H694 974 aaKnown RBP14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 BSDC1Q9NW68 430 aaPredicted RBP14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 TNNQ9UQP3 1299 aa14.73□□□□□ -0.05
TRAFD1-209ENST00000552896 SCN9AQ15858 1988 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms