RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 MICAL1Q8TDZ2 1067 aa8.49□□□□□ -1.05
RFX4-211ENST00000552866 ELP3Q9H9T3 547 aa8.49□□□□□ -1.05
RFX4-211ENST00000552866 SIRPGQ9P1W8 387 aa8.49□□□□□ -1.05
RFX4-211ENST00000552866 UBAP1LF5GYI3 381 aa8.48□□□□□ -1.05
RFX4-211ENST00000552866 IBSPP21815 317 aaPredicted RBP8.48□□□□□ -1.05
RFX4-211ENST00000552866 INPP5BP32019 993 aa8.48□□□□□ -1.05
RFX4-211ENST00000552866 NASPP49321 788 aaPredicted RBP8.48□□□□□ -1.05
RFX4-211ENST00000552866 NNTQ13423 1086 aa8.48□□□□□ -1.05
RFX4-211ENST00000552866 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
RFX4-211ENST00000552866 MRGPRX2Q96LB1 330 aa8.48□□□□□ -1.05
RFX4-211ENST00000552866 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
RFX4-211ENST00000552866 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
RFX4-211ENST00000552866 ADAMTS1Q9UHI8 967 aa8.48□□□□□ -1.05
RFX4-211ENST00000552866 TTF2Q9UNY4 1162 aaKnown RBP8.48□□□□□ -1.05
RFX4-211ENST00000552866 MARCH6O60337 910 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 ITGBL1O95965 494 aaPredicted RBP8.47□□□□□ -1.05
RFX4-211ENST00000552866 GPC1P35052 558 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 GRM2Q14416 872 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 C4orf17Q53FE4 359 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 HSH2DQ96JZ2 352 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 CHRDQ9H2X0 955 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 RTCBQ9Y3I0 505 aaKnown RBP8.47□□□□□ -1.05
RFX4-211ENST00000552866 KCNMB2Q9Y691 235 aa8.47□□□□□ -1.05
RFX4-211ENST00000552866 POLR3DP05423 398 aaPredicted RBP8.46□□□□□ -1.06
RFX4-211ENST00000552866 TATP17735 454 aaPredicted RBP8.46□□□□□ -1.06
RFX4-211ENST00000552866 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.06
RFX4-211ENST00000552866 LHX8Q68G74 356 aa8.46□□□□□ -1.06
RFX4-211ENST00000552866 ZNF280CQ8ND82 737 aa8.46□□□□□ -1.06
RFX4-211ENST00000552866 GRIP2Q9C0E4 1043 aa8.46□□□□□ -1.06
RFX4-211ENST00000552866 METTL14Q9HCE5 456 aaKnown RBP8.46□□□□□ -1.06
RFX4-211ENST00000552866 NOP58Q9Y2X3 529 aaKnown RBP8.46□□□□□ -1.06
RFX4-211ENST00000552866 SOX9P48436 509 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 RELBQ01201 579 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 COL9A2Q14055 689 aaPredicted RBP8.45□□□□□ -1.06
RFX4-211ENST00000552866 ANKS3Q6ZW76 656 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 NOL8Q76FK4 1167 aaKnown RBP8.45□□□□□ -1.06
RFX4-211ENST00000552866 RELL1Q8IUW5 271 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 CMTR1Q8N1G2 835 aaKnown RBP8.45□□□□□ -1.06
RFX4-211ENST00000552866 C3orf58Q8NDZ4 430 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 ANKRD24Q8TF21 1146 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 SRPK1Q96SB4 655 aaKnown RBP8.45□□□□□ -1.06
RFX4-211ENST00000552866 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 TRIM55Q9BYV6 548 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.45□□□□□ -1.06
RFX4-211ENST00000552866 TRAK1Q9UPV9 953 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 EFR3BQ9Y2G0 817 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 USP20Q9Y2K6 914 aa8.45□□□□□ -1.06
RFX4-211ENST00000552866 EREGO14944 169 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 EIF4A3P38919 411 aaKnown RBP8.44□□□□□ -1.06
RFX4-211ENST00000552866 VEGFBP49765 207 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 ANAPC15P60006 121 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 SLC27A3Q5K4L6 730 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 LIAT1Q6ZQX7 453 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 ITPKCQ96DU7 683 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 KLRG1Q96E93 195 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 TMEM74Q96NL1 305 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 PPM1HQ9ULR3 514 aa8.44□□□□□ -1.06
RFX4-211ENST00000552866 U2SURPO15042 1029 aaKnown RBP8.43□□□□□ -1.06
RFX4-211ENST00000552866 KLF4O43474 513 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 RLBP1P12271 317 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 ETFBP38117 255 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 RAB33AQ14088 237 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 CCDC85BQ15834 202 aaPredicted RBP8.43□□□□□ -1.06
RFX4-211ENST00000552866 KIAA0319Q5VV43 1072 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 LRP10Q7Z4F1 713 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 GLIS3Q8NEA6 775 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 PMEPA1Q969W9 287 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 AIDAQ96BJ3 306 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 EAF1Q96JC9 268 aaPredicted RBP8.43□□□□□ -1.06
RFX4-211ENST00000552866 RNPC3Q96LT9 517 aaKnown RBP8.43□□□□□ -1.06
RFX4-211ENST00000552866 ZNF395Q9H8N7 513 aaPredicted RBP8.43□□□□□ -1.06
RFX4-211ENST00000552866 KCNQ5Q9NR82 932 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 GINM1Q9NU53 330 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 SNTG2Q9NY99 539 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
RFX4-211ENST00000552866 ZIC2O95409 532 aaPredicted RBP8.42□□□□□ -1.06
RFX4-211ENST00000552866 ALDH1A1P00352 501 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 EPB42P16452 691 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 GBP2P32456 591 aaPredicted RBP8.42□□□□□ -1.06
RFX4-211ENST00000552866 MAP3K10Q02779 954 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 RASA3Q14644 834 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 PLEKHG4Q58EX7 1191 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 NT5C1AQ9BXI3 368 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 KLF16Q9BXK1 252 aaPredicted RBP8.42□□□□□ -1.06
RFX4-211ENST00000552866 ABI2Q9NYB9 513 aaPredicted RBP8.42□□□□□ -1.06
RFX4-211ENST00000552866 COL4A3BPQ9Y5P4 624 aa8.42□□□□□ -1.06
RFX4-211ENST00000552866 SPATA31C2B4DYI2 1134 aa8.41□□□□□ -1.06
RFX4-211ENST00000552866 RNF144AP50876 292 aaPredicted RBP8.41□□□□□ -1.06
RFX4-211ENST00000552866 PRPF40BQ6NWY9 871 aaKnown RBP8.41□□□□□ -1.06
RFX4-211ENST00000552866 BICDL1Q6ZP65 573 aa8.41□□□□□ -1.06
RFX4-211ENST00000552866 ZNF296Q8WUU4 475 aaPredicted RBP8.41□□□□□ -1.06
RFX4-211ENST00000552866 RHOVQ96L33 236 aa8.41□□□□□ -1.06
RFX4-211ENST00000552866 DEPDC7Q96QD5 511 aa8.41□□□□□ -1.06
RFX4-211ENST00000552866 CNTN3Q9P232 1028 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms