RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 EVI5LQ96CN4 794 aa9.23□□□□□ -0.93
SYT1-212ENST00000552744 GTPBP4Q9BZE4 634 aaKnown RBP9.23□□□□□ -0.93
SYT1-212ENST00000552744 SCAND2PQ9GZW5 306 aaPredicted RBP9.23□□□□□ -0.93
SYT1-212ENST00000552744 KDRP35968 1356 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 PSMA5P28066 241 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 EAF2Q96CJ1 260 aaPredicted RBP9.22□□□□□ -0.93
SYT1-212ENST00000552744 PGBD1Q96JS3 809 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 PRAMEF22A3QJZ6 481 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 USP27XA6NNY8 438 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 CTIFO43310 598 aaKnown RBP9.22□□□□□ -0.93
SYT1-212ENST00000552744 HTATSF1O43719 755 aaKnown RBP9.22□□□□□ -0.93
SYT1-212ENST00000552744 CHGBP05060 677 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 EIF4A1P60842 406 aaKnown RBP9.22□□□□□ -0.93
SYT1-212ENST00000552744 G3BP1Q13283 466 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYT1-212ENST00000552744 PROSER3Q2NL68 480 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 ZNF589Q86UQ0 364 aaPredicted RBP9.22□□□□□ -0.93
SYT1-212ENST00000552744 SYTL4Q96C24 671 aaPredicted RBP9.22□□□□□ -0.93
SYT1-212ENST00000552744 TM6SF1Q9BZW5 370 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 FTOQ9C0B1 505 aaKnown RBP eCLIP9.22□□□□□ -0.93
SYT1-212ENST00000552744 USP16Q9Y5T5 823 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 XRN1Q8IZH2 1706 aaKnown RBP9.22□□□□□ -0.93
SYT1-212ENST00000552744 NPHP3Q7Z494 1330 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 USP31Q70CQ4 1352 aa9.22□□□□□ -0.93
SYT1-212ENST00000552744 SETD1AO15047 1707 aaKnown RBP9.21□□□□□ -0.93
SYT1-212ENST00000552744 BTBD11A6QL63 1104 aa9.21□□□□□ -0.93
SYT1-212ENST00000552744 BECN2A8MW95 431 aa9.21□□□□□ -0.93
SYT1-212ENST00000552744 LTKP29376 864 aa9.21□□□□□ -0.93
SYT1-212ENST00000552744 RNF20Q5VTR2 975 aa9.21□□□□□ -0.93
SYT1-212ENST00000552744 MAP4K1Q92918 833 aa9.21□□□□□ -0.93
SYT1-212ENST00000552744 BRF1Q92994 677 aa9.21□□□□□ -0.93
SYT1-212ENST00000552744 SMTNL1A8MU46 457 aa9.21□□□□□ -0.94
SYT1-212ENST00000552744 TOB2Q14106 344 aaPredicted RBP9.21□□□□□ -0.94
SYT1-212ENST00000552744 CEP135Q66GS9 1140 aa9.21□□□□□ -0.94
SYT1-212ENST00000552744 CLSTN2Q9H4D0 955 aa9.21□□□□□ -0.94
SYT1-212ENST00000552744 DDX19AQ9NUU7 478 aaKnown RBP9.21□□□□□ -0.94
SYT1-212ENST00000552744 AMOTL2Q9Y2J4 779 aa9.21□□□□□ -0.94
SYT1-212ENST00000552744 NRXN3Q9Y4C0 1643 aa9.2□□□□□ -0.94
SYT1-212ENST00000552744 SASH1O94885 1247 aa9.2□□□□□ -0.94
SYT1-212ENST00000552744 RPS6KB1P23443 525 aa9.2□□□□□ -0.94
SYT1-212ENST00000552744 GUCY1B3Q02153 619 aa9.2□□□□□ -0.94
SYT1-212ENST00000552744 CCDC129Q6ZRS4 1044 aa9.2□□□□□ -0.94
SYT1-212ENST00000552744 C11orf57Q6ZUT1 292 aaPredicted RBP9.2□□□□□ -0.94
SYT1-212ENST00000552744 PLA2G4DQ86XP0 818 aa9.2□□□□□ -0.94
SYT1-212ENST00000552744 SIRT1Q96EB6 747 aa9.2□□□□□ -0.94
SYT1-212ENST00000552744 SKILP12757 684 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 RBM33Q96EV2 1170 aaKnown RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 BICC1Q9H694 974 aaKnown RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 CGNQ9P2M7 1197 aaKnown RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 CTNNA3Q9UI47 895 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 ELP1O95163 1332 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 TTC21AQ8NDW8 1320 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 FAM208AQ9UK61 1670 aaKnown RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 KIF20AO95235 890 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 ANKRD1Q15327 319 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 PTPN14Q15678 1187 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 LRRC59Q96AG4 307 aaKnown RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 SUCLG2Q96I99 432 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 SEC62Q99442 399 aaKnown RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 DNAJC2Q99543 621 aaKnown RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 ZNF215Q9UL58 517 aaPredicted RBP9.19□□□□□ -0.94
SYT1-212ENST00000552744 ADCY9O60503 1353 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 RGPD1P0DJD0 1748 aa9.19□□□□□ -0.94
SYT1-212ENST00000552744 CEBPAP49715 358 aaPredicted RBP9.18□□□□□ -0.94
SYT1-212ENST00000552744 CCT2P78371 535 aaKnown RBP9.18□□□□□ -0.94
SYT1-212ENST00000552744 NBPF6Q5VWK0 638 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 ZNF530Q6P9A1 599 aaPredicted RBP9.18□□□□□ -0.94
SYT1-212ENST00000552744 Q6ZUG5 572 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 ERC1Q8IUD2 1116 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 LRRC8AQ8IWT6 810 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 TDRD7Q8NHU6 1098 aaKnown RBP9.18□□□□□ -0.94
SYT1-212ENST00000552744 NBPF4Q96M43 638 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 FEZ1Q99689 392 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 DBF4Q9UBU7 674 aaPredicted RBP9.18□□□□□ -0.94
SYT1-212ENST00000552744 PAXBP1Q9Y5B6 917 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 SPATA31D1Q6ZQQ2 1576 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 CCAR1Q8IX12 1150 aaKnown RBP9.18□□□□□ -0.94
SYT1-212ENST00000552744 NEK1Q96PY6 1258 aa9.18□□□□□ -0.94
SYT1-212ENST00000552744 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.17□□□□□ -0.94
SYT1-212ENST00000552744 USP42Q9H9J4 1324 aaKnown RBP9.17□□□□□ -0.94
SYT1-212ENST00000552744 ERICH4A6NGS2 130 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 CCDC69A6NI79 296 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 HIP1O00291 1037 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 MYL6BP14649 208 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 ME1P48163 572 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 ELF2Q15723 593 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 SLFNL1Q499Z3 407 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 RNF25Q96BH1 459 aaPredicted RBP9.17□□□□□ -0.94
SYT1-212ENST00000552744 TMEM2Q9UHN6 1383 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 GRM8O00222 908 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 PIP4K2AP48426 406 aaPredicted RBP9.17□□□□□ -0.94
SYT1-212ENST00000552744 CHST3Q7LGC8 479 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.17□□□□□ -0.94
SYT1-212ENST00000552744 KCNB2Q92953 911 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 CFAP45Q9UL16 551 aa9.17□□□□□ -0.94
SYT1-212ENST00000552744 PXDNLA1KZ92 1463 aa9.16□□□□□ -0.94
SYT1-212ENST00000552744 CACNA1FO60840 1977 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms