RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 U2AF1L5P0DN76 240 aaPredicted RBP11.32□□□□□ -0.6
CDK4-213ENST00000552713 MYL6BP14649 208 aa11.32□□□□□ -0.6
CDK4-213ENST00000552713 U2AF1Q01081 240 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDK4-213ENST00000552713 ZNF34Q8IZ26 560 aa11.32□□□□□ -0.6
CDK4-213ENST00000552713 TRPM4Q8TD43 1214 aa11.32□□□□□ -0.6
CDK4-213ENST00000552713 PGAP2Q9UHJ9 254 aa11.32□□□□□ -0.6
CDK4-213ENST00000552713 TNRC18O15417 2968 aaPredicted RBP11.31□□□□□ -0.6
CDK4-213ENST00000552713 ZBTB22O15209 634 aa11.31□□□□□ -0.6
CDK4-213ENST00000552713 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
CDK4-213ENST00000552713 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
CDK4-213ENST00000552713 ZNRF3Q9ULT6 936 aa11.31□□□□□ -0.6
CDK4-213ENST00000552713 ATP6V0A2Q9Y487 856 aa11.31□□□□□ -0.6
CDK4-213ENST00000552713 ABCC4O15439 1325 aa11.31□□□□□ -0.6
CDK4-213ENST00000552713 SCN9AQ15858 1988 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 DUOX1Q9NRD9 1551 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 YDJCA8MPS7 323 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 HAX1O00165 279 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 CA12O43570 354 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 HTATSF1O43719 755 aaKnown RBP11.3□□□□□ -0.6
CDK4-213ENST00000552713 RAD17O75943 681 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
CDK4-213ENST00000552713 EIF4A1P60842 406 aaKnown RBP11.3□□□□□ -0.6
CDK4-213ENST00000552713 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 KIF6Q6ZMV9 814 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
CDK4-213ENST00000552713 THUMPD2Q9BTF0 503 aaKnown RBP11.3□□□□□ -0.6
CDK4-213ENST00000552713 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
CDK4-213ENST00000552713 USP48Q86UV5 1035 aa11.29□□□□□ -0.6
CDK4-213ENST00000552713 CFAP53Q96M91 514 aa11.29□□□□□ -0.6
CDK4-213ENST00000552713 RTFDC1Q9BY42 306 aaPredicted RBP11.29□□□□□ -0.6
CDK4-213ENST00000552713 COL4A1P02462 1669 aa11.29□□□□□ -0.6
CDK4-213ENST00000552713 LRRC37AA6NMS7 1700 aa11.29□□□□□ -0.6
CDK4-213ENST00000552713 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
CDK4-213ENST00000552713 FAM155AB1AL88 458 aaPredicted RBP11.28□□□□□ -0.6
CDK4-213ENST00000552713 EGFRP00533 1210 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 PPP2R1AP30153 589 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 KIAA2012Q0VF49 1180 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 SLC10A5Q5PT55 438 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 LRP10Q7Z4F1 713 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 NLRP3Q96P20 1036 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 BCL2L13Q9BXK5 485 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
CDK4-213ENST00000552713 NUDCQ9Y266 331 aa11.28□□□□□ -0.6
CDK4-213ENST00000552713 ANXA1P04083 346 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 SOX10P56693 466 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 HUNKP57058 714 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 PROSER3Q2NL68 480 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 CDC37L1Q7L3B6 337 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 SAMD7Q7Z3H4 446 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 ZC3H15Q8WU90 426 aaKnown RBP11.27□□□□□ -0.61
CDK4-213ENST00000552713 ZNF428Q96B54 188 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 VPS33BQ9H267 617 aa11.27□□□□□ -0.61
CDK4-213ENST00000552713 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.61
CDK4-213ENST00000552713 HCLS1P14317 486 aaPredicted RBP11.26□□□□□ -0.61
CDK4-213ENST00000552713 EVX2Q03828 476 aa11.26□□□□□ -0.61
CDK4-213ENST00000552713 NOGQ13253 232 aa11.26□□□□□ -0.61
CDK4-213ENST00000552713 PDIA6Q15084 440 aa11.26□□□□□ -0.61
CDK4-213ENST00000552713 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
CDK4-213ENST00000552713 SP8Q8IXZ3 490 aa11.26□□□□□ -0.61
CDK4-213ENST00000552713 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
CDK4-213ENST00000552713 MPNDQ8N594 471 aa11.26□□□□□ -0.61
CDK4-213ENST00000552713 SUPT20HQ8NEM7 779 aa11.26□□□□□ -0.61
CDK4-213ENST00000552713 UTP14AQ9BVJ6 771 aaKnown RBP11.26□□□□□ -0.61
CDK4-213ENST00000552713 PARP10Q53GL7 1025 aa11.25□□□□□ -0.61
CDK4-213ENST00000552713 CCER1Q8TC90 406 aaPredicted RBP11.25□□□□□ -0.61
CDK4-213ENST00000552713 KCNQ5Q9NR82 932 aa11.25□□□□□ -0.61
CDK4-213ENST00000552713 CDHR2Q9BYE9 1310 aa11.25□□□□□ -0.61
CDK4-213ENST00000552713 PSME4Q14997 1843 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 ADM5C9JUS6 153 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 PSMD14O00487 310 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 BBOX1O75936 387 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
CDK4-213ENST00000552713 TNIP1Q15025 636 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 TBC1D10BQ4KMP7 808 aaPredicted RBP11.24□□□□□ -0.61
CDK4-213ENST00000552713 RGMBQ6NW40 437 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 PNISRQ8TF01 805 aaKnown RBP11.24□□□□□ -0.61
CDK4-213ENST00000552713 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 TMX4Q9H1E5 349 aaPredicted RBP11.24□□□□□ -0.61
CDK4-213ENST00000552713 RNF186Q9NXI6 227 aa11.24□□□□□ -0.61
CDK4-213ENST00000552713 H7C1D1 291 aa11.23□□□□□ -0.61
CDK4-213ENST00000552713 PITPNM1O00562 1244 aa11.23□□□□□ -0.61
CDK4-213ENST00000552713 TRPA1O75762 1119 aa11.23□□□□□ -0.61
CDK4-213ENST00000552713 EIF2S2P20042 333 aaKnown RBP11.23□□□□□ -0.61
CDK4-213ENST00000552713 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDK4-213ENST00000552713 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
CDK4-213ENST00000552713 NLRP10Q86W26 655 aa11.23□□□□□ -0.61
CDK4-213ENST00000552713 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
CDK4-213ENST00000552713 GBA2Q9HCG7 927 aaPredicted RBP11.23□□□□□ -0.61
CDK4-213ENST00000552713 ASTN2O75129 1339 aaPredicted RBP11.22□□□□□ -0.61
CDK4-213ENST00000552713 GRAPQ13588 217 aa11.22□□□□□ -0.61
CDK4-213ENST00000552713 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
CDK4-213ENST00000552713 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
CDK4-213ENST00000552713 RTL9Q8NET4 1388 aa11.22□□□□□ -0.61
CDK4-213ENST00000552713 GRAPLQ8TC17 118 aaPredicted RBP11.22□□□□□ -0.61
CDK4-213ENST00000552713 CSRNP1Q96S65 589 aa11.22□□□□□ -0.61
CDK4-213ENST00000552713 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
CDK4-213ENST00000552713 ZNF157P51786 506 aaPredicted RBP11.21□□□□□ -0.61
CDK4-213ENST00000552713 NFE2L2Q16236 605 aa11.21□□□□□ -0.61
CDK4-213ENST00000552713 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms