RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
PRIM1-208ENST00000552590 CACNA1SQ13698 1873 aa11.81□□□□□ -0.52
PRIM1-208ENST00000552590 ANKRD31Q8N7Z5 1873 aa11.81□□□□□ -0.52
PRIM1-208ENST00000552590 KIAA0100Q14667 2235 aaKnown RBP11.81□□□□□ -0.52
PRIM1-208ENST00000552590 INTS5Q6P9B9 1019 aaKnown RBP11.81□□□□□ -0.52
PRIM1-208ENST00000552590 CCDC24Q8N4L8 307 aa11.81□□□□□ -0.52
PRIM1-208ENST00000552590 HHIPL1Q96JK4 782 aa11.81□□□□□ -0.52
PRIM1-208ENST00000552590 ZNF277Q9NRM2 450 aaPredicted RBP11.81□□□□□ -0.52
PRIM1-208ENST00000552590 COL11A2P13942 1736 aaPredicted RBP11.81□□□□□ -0.52
PRIM1-208ENST00000552590 TRPA1O75762 1119 aa11.8□□□□□ -0.52
PRIM1-208ENST00000552590 NOGQ13253 232 aa11.8□□□□□ -0.52
PRIM1-208ENST00000552590 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
PRIM1-208ENST00000552590 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
PRIM1-208ENST00000552590 INSRP06213 1382 aa11.8□□□□□ -0.52
PRIM1-208ENST00000552590 HTTP42858 3142 aa11.8□□□□□ -0.52
PRIM1-208ENST00000552590 COL9A1P20849 921 aa11.79□□□□□ -0.52
PRIM1-208ENST00000552590 PRPF40BQ6NWY9 871 aaKnown RBP11.79□□□□□ -0.52
PRIM1-208ENST00000552590 GPC2Q8N158 579 aa11.79□□□□□ -0.52
PRIM1-208ENST00000552590 SAGE1Q9NXZ1 904 aa11.79□□□□□ -0.52
PRIM1-208ENST00000552590 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
PRIM1-208ENST00000552590 TSR3Q9UJK0 312 aaKnown RBP11.79□□□□□ -0.52
PRIM1-208ENST00000552590 EPS15P42566 896 aa11.78□□□□□ -0.52
PRIM1-208ENST00000552590 AKAP4Q5JQC9 854 aa11.78□□□□□ -0.52
PRIM1-208ENST00000552590 RNF186Q9NXI6 227 aa11.78□□□□□ -0.52
PRIM1-208ENST00000552590 KIAA1468Q9P260 1216 aa11.78□□□□□ -0.52
PRIM1-208ENST00000552590 VCANP13611 3396 aa11.78□□□□□ -0.52
PRIM1-208ENST00000552590 FZD9O00144 591 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 PDE6BP35913 854 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 SOGA3Q5TF21 947 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 SYNE4Q8N205 404 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 ZNF408Q9H9D4 720 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 NARFQ9UHQ1 456 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.52
PRIM1-208ENST00000552590 ERVV-2B6SEH9 535 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 LMOD1P29536 600 aaPredicted RBP11.76□□□□□ -0.53
PRIM1-208ENST00000552590 PPP1R15BQ5SWA1 713 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 HS6ST3Q8IZP7 471 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 CNKSR1Q969H4 720 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 PDZRN3Q9UPQ7 1066 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 SOS1Q07889 1333 aaPredicted RBP11.76□□□□□ -0.53
PRIM1-208ENST00000552590 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 AKAP11Q9UKA4 1901 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 LAMA3Q16787 3333 aa11.76□□□□□ -0.53
PRIM1-208ENST00000552590 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.53
PRIM1-208ENST00000552590 TJP1Q07157 1748 aa11.75□□□□□ -0.53
PRIM1-208ENST00000552590 SCNN1DP51172 638 aa11.75□□□□□ -0.53
PRIM1-208ENST00000552590 KIF23Q02241 960 aaPredicted RBP11.75□□□□□ -0.53
PRIM1-208ENST00000552590 CCDC93Q567U6 631 aa11.75□□□□□ -0.53
PRIM1-208ENST00000552590 OLFM4Q6UX06 510 aa11.75□□□□□ -0.53
PRIM1-208ENST00000552590 C7orf43Q8WVR3 580 aa11.75□□□□□ -0.53
PRIM1-208ENST00000552590 GLIS2Q9BZE0 524 aaPredicted RBP11.75□□□□□ -0.53
PRIM1-208ENST00000552590 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
PRIM1-208ENST00000552590 STYK1Q6J9G0 422 aa11.74□□□□□ -0.53
PRIM1-208ENST00000552590 PRR5LQ6MZQ0 368 aa11.74□□□□□ -0.53
PRIM1-208ENST00000552590 USP50Q70EL3 339 aaPredicted RBP11.74□□□□□ -0.53
PRIM1-208ENST00000552590 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
PRIM1-208ENST00000552590 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
PRIM1-208ENST00000552590 FAM155AB1AL88 458 aaPredicted RBP11.73□□□□□ -0.53
PRIM1-208ENST00000552590 SRGNP10124 158 aa11.73□□□□□ -0.53
PRIM1-208ENST00000552590 HUNKP57058 714 aa11.73□□□□□ -0.53
PRIM1-208ENST00000552590 CABP4P57796 275 aa11.73□□□□□ -0.53
PRIM1-208ENST00000552590 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
PRIM1-208ENST00000552590 SEPT9Q9UHD8 586 aaPredicted RBP11.73□□□□□ -0.53
PRIM1-208ENST00000552590 FLT4P35916 1363 aa11.73□□□□□ -0.53
PRIM1-208ENST00000552590 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
PRIM1-208ENST00000552590 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
PRIM1-208ENST00000552590 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
PRIM1-208ENST00000552590 COL15A1P39059 1388 aa11.72□□□□□ -0.53
PRIM1-208ENST00000552590 TONSLQ96HA7 1378 aa11.72□□□□□ -0.53
PRIM1-208ENST00000552590 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
PRIM1-208ENST00000552590 MASTLQ96GX5 879 aa11.71□□□□□ -0.53
PRIM1-208ENST00000552590 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
PRIM1-208ENST00000552590 GGNBP2Q9H3C7 697 aa11.71□□□□□ -0.53
PRIM1-208ENST00000552590 HDAC9Q9UKV0 1011 aa11.71□□□□□ -0.53
PRIM1-208ENST00000552590 PCDHGA10Q9Y5H3 936 aa11.71□□□□□ -0.53
PRIM1-208ENST00000552590 RAB3GAP2Q9H2M9 1393 aa11.71□□□□□ -0.53
PRIM1-208ENST00000552590 EIF6P56537 245 aaKnown RBP11.7□□□□□ -0.54
PRIM1-208ENST00000552590 TBC1D9BQ66K14 1250 aa11.7□□□□□ -0.54
PRIM1-208ENST00000552590 RGMBQ6NW40 437 aa11.7□□□□□ -0.54
PRIM1-208ENST00000552590 PPP1R18Q6NYC8 613 aa11.7□□□□□ -0.54
PRIM1-208ENST00000552590 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
PRIM1-208ENST00000552590 EYA1Q99502 592 aa11.7□□□□□ -0.54
PRIM1-208ENST00000552590 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
PRIM1-208ENST00000552590 TJAP1Q5JTD0 557 aa11.69□□□□□ -0.54
PRIM1-208ENST00000552590 FBXO46Q6PJ61 603 aaPredicted RBP11.69□□□□□ -0.54
PRIM1-208ENST00000552590 CSRNP1Q96S65 589 aa11.69□□□□□ -0.54
PRIM1-208ENST00000552590 SPTBN5Q9NRC6 3674 aaKnown RBP11.68□□□□□ -0.54
PRIM1-208ENST00000552590 BCORQ6W2J9 1755 aa11.68□□□□□ -0.54
PRIM1-208ENST00000552590 COL4A5P29400 1685 aa11.68□□□□□ -0.54
PRIM1-208ENST00000552590 CYP19A1P11511 503 aaPredicted RBP11.68□□□□□ -0.54
PRIM1-208ENST00000552590 DLK2Q6UY11 383 aa11.68□□□□□ -0.54
PRIM1-208ENST00000552590 RTKN2Q8IZC4 609 aa11.68□□□□□ -0.54
PRIM1-208ENST00000552590 NFATC2IPQ8NCF5 419 aa11.68□□□□□ -0.54
PRIM1-208ENST00000552590 ZNF296Q8WUU4 475 aaPredicted RBP11.68□□□□□ -0.54
PRIM1-208ENST00000552590 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
PRIM1-208ENST00000552590 FYB1O15117 783 aa11.67□□□□□ -0.54
PRIM1-208ENST00000552590 NPHP1O15259 732 aa11.67□□□□□ -0.54
PRIM1-208ENST00000552590 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
PRIM1-208ENST00000552590 ADARB2Q9NS39 739 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms