RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 IFIT5Q13325 482 aaKnown RBP17.49■□□□□ 0.39
SCN8A-207ENST00000551216 INTS5Q6P9B9 1019 aaKnown RBP17.49■□□□□ 0.39
SCN8A-207ENST00000551216 CLEC17AQ6ZS10 378 aa17.49■□□□□ 0.39
SCN8A-207ENST00000551216 SPRYD3Q8NCJ5 442 aa17.49■□□□□ 0.39
SCN8A-207ENST00000551216 INTS4Q96HW7 963 aaKnown RBP17.49■□□□□ 0.39
SCN8A-207ENST00000551216 TM6SF1Q9BZW5 370 aa17.49■□□□□ 0.39
SCN8A-207ENST00000551216 BOLA2Q9H3K6 86 aa17.49■□□□□ 0.39
SCN8A-207ENST00000551216 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
SCN8A-207ENST00000551216 ABCC12Q96J65 1359 aa17.48■□□□□ 0.39
SCN8A-207ENST00000551216 DDX11L8A8MPP1 907 aa17.48■□□□□ 0.39
SCN8A-207ENST00000551216 PARP10Q53GL7 1025 aa17.48■□□□□ 0.39
SCN8A-207ENST00000551216 GBP4Q96PP9 640 aa17.48■□□□□ 0.39
SCN8A-207ENST00000551216 FSD1Q9BTV5 496 aa17.48■□□□□ 0.39
SCN8A-207ENST00000551216 IL25Q9H293 177 aa17.48■□□□□ 0.39
SCN8A-207ENST00000551216 THSD7AQ9UPZ6 1657 aa17.48■□□□□ 0.39
SCN8A-207ENST00000551216 MCM4P33991 863 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 HLFQ16534 295 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 FAM89AQ96GI7 184 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 CCDC171Q6TFL3 1326 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 PDE8AO60658 829 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
SCN8A-207ENST00000551216 MAP4K1Q92918 833 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 DBNDD2Q9BQY9 259 aa17.47■□□□□ 0.39
SCN8A-207ENST00000551216 ZKSCAN1P17029 563 aaPredicted RBP17.46■□□□□ 0.39
SCN8A-207ENST00000551216 CTSWP56202 376 aa17.46■□□□□ 0.39
SCN8A-207ENST00000551216 CUL4AQ13619 759 aa17.46■□□□□ 0.39
SCN8A-207ENST00000551216 LRRFIP1Q32MZ4 808 aaKnown RBP17.46■□□□□ 0.39
SCN8A-207ENST00000551216 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
SCN8A-207ENST00000551216 TTLL11Q8NHH1 800 aa17.46■□□□□ 0.39
SCN8A-207ENST00000551216 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
SCN8A-207ENST00000551216 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
SCN8A-207ENST00000551216 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
SCN8A-207ENST00000551216 ARXQ96QS3 562 aa17.45■□□□□ 0.38
SCN8A-207ENST00000551216 HMG20BQ9P0W2 317 aa17.45■□□□□ 0.38
SCN8A-207ENST00000551216 TRMT112Q9UI30 125 aaKnown RBP17.45■□□□□ 0.38
SCN8A-207ENST00000551216 SNX14Q9Y5W7 946 aa17.45■□□□□ 0.38
SCN8A-207ENST00000551216 MYH14Q7Z406 1995 aaKnown RBP17.44■□□□□ 0.38
SCN8A-207ENST00000551216 LAMB2P55268 1798 aa17.44■□□□□ 0.38
SCN8A-207ENST00000551216 BCORQ6W2J9 1755 aa17.44■□□□□ 0.38
SCN8A-207ENST00000551216 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
SCN8A-207ENST00000551216 IRS4O14654 1257 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-207ENST00000551216 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
SCN8A-207ENST00000551216 TAF7LQ5H9L4 462 aa17.44■□□□□ 0.38
SCN8A-207ENST00000551216 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
SCN8A-207ENST00000551216 ZNF652Q9Y2D9 606 aa17.44■□□□□ 0.38
SCN8A-207ENST00000551216 A0A1B0GUL7 405 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
SCN8A-207ENST00000551216 TSGA10IPQ3SY00 556 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 ACSBG1Q96GR2 724 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 TMX3Q96JJ7 454 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 LRP5O75197 1615 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 NHSQ6T4R5 1651 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 GSE1Q14687 1217 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 CCDC158Q5M9N0 1113 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 TBC1D2BQ9UPU7 963 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 CNTNAP4Q9C0A0 1308 aa17.43■□□□□ 0.38
SCN8A-207ENST00000551216 RTL9Q8NET4 1388 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 GPTP24298 496 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 PSMA5P28066 241 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
SCN8A-207ENST00000551216 ITPK1Q13572 414 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 TNPO1Q92973 898 aaKnown RBP17.42■□□□□ 0.38
SCN8A-207ENST00000551216 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
SCN8A-207ENST00000551216 NEUROD6Q96NK8 337 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 USP21Q9UK80 565 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
SCN8A-207ENST00000551216 CYP2E1P05181 493 aaPredicted RBP17.41■□□□□ 0.38
SCN8A-207ENST00000551216 ITGA6P23229 1130 aa17.41■□□□□ 0.38
SCN8A-207ENST00000551216 RC3H1Q5TC82 1133 aaKnown RBP17.41■□□□□ 0.38
SCN8A-207ENST00000551216 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
SCN8A-207ENST00000551216 ZNF594Q96JF6 807 aaPredicted RBP17.41■□□□□ 0.38
SCN8A-207ENST00000551216 FAM227BQ96M60 508 aa17.41■□□□□ 0.38
SCN8A-207ENST00000551216 TTC14Q96N46 770 aa17.41■□□□□ 0.38
SCN8A-207ENST00000551216 UTP14AQ9BVJ6 771 aaKnown RBP17.41■□□□□ 0.38
SCN8A-207ENST00000551216 PAG1Q9NWQ8 432 aa17.41■□□□□ 0.38
SCN8A-207ENST00000551216 UBN2Q6ZU65 1347 aa17.41■□□□□ 0.38
SCN8A-207ENST00000551216 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
SCN8A-207ENST00000551216 PTH1RQ03431 593 aa17.4■□□□□ 0.38
SCN8A-207ENST00000551216 KRT32Q14532 448 aa17.4■□□□□ 0.38
SCN8A-207ENST00000551216 MCMDC2Q4G0Z9 681 aa17.4■□□□□ 0.38
SCN8A-207ENST00000551216 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
SCN8A-207ENST00000551216 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
SCN8A-207ENST00000551216 RBM8AQ9Y5S9 174 aaKnown RBP17.4■□□□□ 0.38
SCN8A-207ENST00000551216 GOLGA6L22H0YM25 854 aa17.39■□□□□ 0.38
SCN8A-207ENST00000551216 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.38
SCN8A-207ENST00000551216 TIMM10P62072 90 aa17.39■□□□□ 0.38
SCN8A-207ENST00000551216 SKOR2Q2VWA4 1001 aaPredicted RBP17.39■□□□□ 0.38
SCN8A-207ENST00000551216 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.38
SCN8A-207ENST00000551216 CERKQ8TCT0 537 aa17.39■□□□□ 0.38
SCN8A-207ENST00000551216 PUS3Q9BZE2 481 aaKnown RBP17.39■□□□□ 0.38
SCN8A-207ENST00000551216 MROH5Q6ZUA9 1318 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 TAF5LO75529 589 aa17.39■□□□□ 0.37
SCN8A-207ENST00000551216 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms