RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 BBOX1O75936 387 aa17.38■□□□□ 0.37
TROAP-213ENST00000550709 CELF1Q92879 486 aaKnown RBP17.38■□□□□ 0.37
TROAP-213ENST00000550709 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
TROAP-213ENST00000550709 TAOK3Q9H2K8 898 aa17.38■□□□□ 0.37
TROAP-213ENST00000550709 KIF16BQ96L93 1317 aa17.38■□□□□ 0.37
TROAP-213ENST00000550709 RTKN2Q8IZC4 609 aa17.37■□□□□ 0.37
TROAP-213ENST00000550709 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
TROAP-213ENST00000550709 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
TROAP-213ENST00000550709 IPO8O15397 1037 aaKnown RBP17.36■□□□□ 0.37
TROAP-213ENST00000550709 LMNB1P20700 586 aa17.36■□□□□ 0.37
TROAP-213ENST00000550709 PRELPP51888 382 aa17.36■□□□□ 0.37
TROAP-213ENST00000550709 GREM2Q9H772 168 aa17.36■□□□□ 0.37
TROAP-213ENST00000550709 ZNF277Q9NRM2 450 aaPredicted RBP17.36■□□□□ 0.37
TROAP-213ENST00000550709 SLX4Q8IY92 1834 aa17.35■□□□□ 0.37
TROAP-213ENST00000550709 NBPF7P0C2Y1 421 aaPredicted RBP17.35■□□□□ 0.37
TROAP-213ENST00000550709 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
TROAP-213ENST00000550709 CC2D2BQ6DHV5 1058 aa17.35■□□□□ 0.37
TROAP-213ENST00000550709 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
TROAP-213ENST00000550709 CLUAP1Q96AJ1 413 aa17.35■□□□□ 0.37
TROAP-213ENST00000550709 PLA2G12BQ9BX93 195 aa17.35■□□□□ 0.37
TROAP-213ENST00000550709 TNNQ9UQP3 1299 aa17.35■□□□□ 0.37
TROAP-213ENST00000550709 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
TROAP-213ENST00000550709 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
TROAP-213ENST00000550709 CCT4P50991 539 aaKnown RBP17.34■□□□□ 0.37
TROAP-213ENST00000550709 FKBP4Q02790 459 aaKnown RBP eCLIP17.34■□□□□ 0.37
TROAP-213ENST00000550709 FAM161AQ3B820 660 aa17.34■□□□□ 0.37
TROAP-213ENST00000550709 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
TROAP-213ENST00000550709 SP8Q8IXZ3 490 aa17.34■□□□□ 0.37
TROAP-213ENST00000550709 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
TROAP-213ENST00000550709 TRIM27P14373 513 aa17.33■□□□□ 0.36
TROAP-213ENST00000550709 FOXO4P98177 505 aa17.33■□□□□ 0.36
TROAP-213ENST00000550709 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.36
TROAP-213ENST00000550709 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.36
TROAP-213ENST00000550709 ZNF784Q8NCA9 323 aaPredicted RBP17.33■□□□□ 0.36
TROAP-213ENST00000550709 SUCLG2Q96I99 432 aa17.33■□□□□ 0.36
TROAP-213ENST00000550709 USP44Q9H0E7 712 aa17.33■□□□□ 0.36
TROAP-213ENST00000550709 DLEC1Q9Y238 1755 aa17.33■□□□□ 0.36
TROAP-213ENST00000550709 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
TROAP-213ENST00000550709 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
TROAP-213ENST00000550709 DPP8Q6V1X1 898 aaPredicted RBP17.32■□□□□ 0.36
TROAP-213ENST00000550709 CDC5LQ99459 802 aaKnown RBP17.32■□□□□ 0.36
TROAP-213ENST00000550709 LTBP3Q9NS15 1303 aa17.31■□□□□ 0.36
TROAP-213ENST00000550709 CSF1RP07333 972 aa17.31■□□□□ 0.36
TROAP-213ENST00000550709 ITGA6P23229 1130 aa17.31■□□□□ 0.36
TROAP-213ENST00000550709 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
TROAP-213ENST00000550709 MPNDQ8N594 471 aa17.31■□□□□ 0.36
TROAP-213ENST00000550709 NSFL1CQ9UNZ2 370 aaKnown RBP17.31■□□□□ 0.36
TROAP-213ENST00000550709 CACNA1FO60840 1977 aa17.31■□□□□ 0.36
TROAP-213ENST00000550709 UTYO14607 1347 aa17.3■□□□□ 0.36
TROAP-213ENST00000550709 GRIPAP1Q4V328 841 aa17.3■□□□□ 0.36
TROAP-213ENST00000550709 PSMD1Q99460 953 aa17.3■□□□□ 0.36
TROAP-213ENST00000550709 RCAN3Q9UKA8 241 aa17.3■□□□□ 0.36
TROAP-213ENST00000550709 ARFGEF1Q9Y6D6 1849 aa17.29■□□□□ 0.36
TROAP-213ENST00000550709 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
TROAP-213ENST00000550709 GPSM2P81274 684 aa17.29■□□□□ 0.36
TROAP-213ENST00000550709 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
TROAP-213ENST00000550709 KAZALD1Q96I82 304 aa17.29■□□□□ 0.36
TROAP-213ENST00000550709 BICC1Q9H694 974 aaKnown RBP17.29■□□□□ 0.36
TROAP-213ENST00000550709 DDX60Q8IY21 1712 aaKnown RBP17.29■□□□□ 0.36
TROAP-213ENST00000550709 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
TROAP-213ENST00000550709 UBTFL1P0CB47 393 aaPredicted RBP17.28■□□□□ 0.36
TROAP-213ENST00000550709 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
TROAP-213ENST00000550709 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
TROAP-213ENST00000550709 FTSJ3Q8IY81 847 aaKnown RBP17.28■□□□□ 0.36
TROAP-213ENST00000550709 ANKIB1Q9P2G1 1089 aa17.28■□□□□ 0.36
TROAP-213ENST00000550709 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
TROAP-213ENST00000550709 C6orf229H3BNL8 230 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 PPIP5K2O43314 1243 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 AOC3Q16853 763 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 TAF7LQ5H9L4 462 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 LARGE2Q8N3Y3 721 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.36
TROAP-213ENST00000550709 MPHOSPH8Q99549 860 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 MEIS3Q99687 375 aa17.27■□□□□ 0.36
TROAP-213ENST00000550709 BSDC1Q9NW68 430 aaPredicted RBP17.27■□□□□ 0.36
TROAP-213ENST00000550709 COL4A1P02462 1669 aa17.26■□□□□ 0.35
TROAP-213ENST00000550709 ANKRD44Q8N8A2 993 aa17.26■□□□□ 0.35
TROAP-213ENST00000550709 SUPT20HQ8NEM7 779 aa17.26■□□□□ 0.35
TROAP-213ENST00000550709 GPR101Q96P66 508 aaPredicted RBP17.26■□□□□ 0.35
TROAP-213ENST00000550709 RTFDC1Q9BY42 306 aaPredicted RBP17.26■□□□□ 0.35
TROAP-213ENST00000550709 GPBP1L1Q9HC44 474 aaPredicted RBP17.26■□□□□ 0.35
TROAP-213ENST00000550709 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
TROAP-213ENST00000550709 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
TROAP-213ENST00000550709 PLIN1O60240 522 aa17.25■□□□□ 0.35
TROAP-213ENST00000550709 RLBP1P12271 317 aa17.25■□□□□ 0.35
TROAP-213ENST00000550709 DZIP1LQ8IYY4 767 aaKnown RBP17.25■□□□□ 0.35
TROAP-213ENST00000550709 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
TROAP-213ENST00000550709 MINPP1Q9UNW1 487 aa17.25■□□□□ 0.35
TROAP-213ENST00000550709 RIMBP2O15034 1052 aa17.24■□□□□ 0.35
TROAP-213ENST00000550709 UFL1O94874 794 aa17.24■□□□□ 0.35
TROAP-213ENST00000550709 TBC1D16Q8TBP0 767 aa17.24■□□□□ 0.35
TROAP-213ENST00000550709 PANK1Q8TE04 598 aa17.24■□□□□ 0.35
TROAP-213ENST00000550709 GGA1Q9UJY5 639 aa17.24■□□□□ 0.35
TROAP-213ENST00000550709 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
TROAP-213ENST00000550709 LAMB2P55268 1798 aa17.24■□□□□ 0.35
TROAP-213ENST00000550709 CACNA1SQ13698 1873 aa17.23■□□□□ 0.35
TROAP-213ENST00000550709 WTIPA6NIX2 430 aaPredicted RBP17.23■□□□□ 0.35
TROAP-213ENST00000550709 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms