RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 TTC22Q5TAA0 569 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 AMOTL2Q9Y2J4 779 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 ABCC1P33527 1531 aa14.32□□□□□ -0.12
RAB3IP-212ENST00000550536 IL16Q14005 1332 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 PABPN1LA6NDY0 278 aaKnown RBP14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 IFIT1BQ5T764 474 aaKnown RBP14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 CCDC102BQ68D86 513 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 CPLX3Q8WVH0 158 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 NEK1Q96PY6 1258 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 DENND4BO75064 1496 aaPredicted RBP14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 SPECC1LQ69YQ0 1117 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 LDHAL6AQ6ZMR3 332 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 CNNM2Q9H8M5 875 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 EMILIN1Q9Y6C2 1016 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 PAXIP1Q6ZW49 1069 aaPredicted RBP14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 FERP16591 822 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 SSFA2P28290 1259 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 ACTN2P35609 894 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 FOXO3O43524 673 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 BMP15O95972 392 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 PRC1O43663 620 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 TMX1Q9H3N1 280 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 VAT1LQ9HCJ6 419 aa14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.31□□□□□ -0.12
RAB3IP-212ENST00000550536 WTAPQ15007 396 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 NBPF6Q5VWK0 638 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 NBPF4Q96M43 638 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 USP25Q9UHP3 1055 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 LMAN1P49257 510 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 SLC4A8Q2Y0W8 1093 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 CEP112Q8N8E3 955 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 TBC1D2Q9BYX2 928 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 ZBTB3Q9H5J0 574 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 SYKP43405 635 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 RNF187Q5TA31 235 aaPredicted RBP14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 LRRC45Q96CN5 670 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 TRIM47Q96LD4 638 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 IDEP14735 1019 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 IFNL2Q8IZJ0 200 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 SNRPA1P09661 255 aaKnown RBP14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 MAATS1Q7Z4T9 603 aa14.3□□□□□ -0.12
RAB3IP-212ENST00000550536 HAND2P61296 217 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 ZNF165P49910 485 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 KCNG4Q8TDN1 519 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 CEP135Q66GS9 1140 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 MSH6P52701 1360 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 TMTC2Q8N394 836 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 RASAL2Q9UJF2 1139 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 MBIPQ9NS73 344 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 CALCOCO1Q9P1Z2 691 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 ORC3Q9UBD5 711 aaPredicted RBP14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 PPIP5K1Q6PFW1 1433 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 SSX2IPQ9Y2D8 614 aa14.29□□□□□ -0.12
RAB3IP-212ENST00000550536 CFAP74Q9C0B2 1584 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 CKAP4Q07065 602 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 POLR3GO15318 223 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 ZFYP08048 801 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 GCC2Q8IWJ2 1684 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 MAST1Q9Y2H9 1570 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 NBPF7P0C2Y1 421 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 HSF2BPO75031 334 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 PPP1R14CQ8TAE6 165 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 SMARCC1Q92922 1105 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 UQCRFS1P1P0C7P4 283 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 UTP14AQ9BVJ6 771 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 DISP3Q9P2K9 1392 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 RBM25P49756 843 aaKnown RBP14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 KIAA0753Q2KHM9 967 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 TEX14Q8IWB6 1497 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
RAB3IP-212ENST00000550536 NUCB1Q02818 461 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 PI4KAP2A4QPH2 592 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 PI4KAP1Q8N8J0 262 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 SELENOOQ9BVL4 669 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 A0A1W2PRG0 241 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 ESR2Q92731 530 aa14.27□□□□□ -0.12
RAB3IP-212ENST00000550536 CBX1P83916 185 aa14.27□□□□□ -0.13
RAB3IP-212ENST00000550536 TRAF1Q13077 416 aa14.27□□□□□ -0.13
RAB3IP-212ENST00000550536 C6orf163Q5TEZ5 329 aa14.27□□□□□ -0.13
RAB3IP-212ENST00000550536 UBASH3AP57075 661 aa14.27□□□□□ -0.13
RAB3IP-212ENST00000550536 RTN1Q16799 776 aa14.27□□□□□ -0.13
RAB3IP-212ENST00000550536 PRPHP41219 470 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 ZBTB43O43298 467 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 N4BP3O15049 544 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 ISM2Q6H9L7 571 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 CCDC155Q8N6L0 562 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 ZSCAN23Q3MJ62 389 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 ANKRD13DQ6ZTN6 518 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 SPATA24Q86W54 205 aa14.26□□□□□ -0.13
RAB3IP-212ENST00000550536 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms