RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 RAB3GAP1Q15042 981 aa14.34□□□□□ -0.11
LETMD1-223ENST00000550442 INTS4Q96HW7 963 aaKnown RBP14.34□□□□□ -0.11
LETMD1-223ENST00000550442 ESYT1Q9BSJ8 1104 aa14.34□□□□□ -0.11
LETMD1-223ENST00000550442 TEX13AQ9BXU3 409 aaPredicted RBP14.34□□□□□ -0.11
LETMD1-223ENST00000550442 EXOC6BQ9Y2D4 811 aa14.34□□□□□ -0.11
LETMD1-223ENST00000550442 MAP3K2Q9Y2U5 619 aa14.34□□□□□ -0.11
LETMD1-223ENST00000550442 CHMLP26374 656 aa14.33□□□□□ -0.12
LETMD1-223ENST00000550442 SBF1O95248 1867 aa14.33□□□□□ -0.12
LETMD1-223ENST00000550442 ITGB4P16144 1822 aa14.32□□□□□ -0.12
LETMD1-223ENST00000550442 GNPATO15228 680 aa14.32□□□□□ -0.12
LETMD1-223ENST00000550442 RIC3Q7Z5B4 369 aa14.32□□□□□ -0.12
LETMD1-223ENST00000550442 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
LETMD1-223ENST00000550442 FOXN1O15353 648 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 SMARCA5O60264 1052 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-223ENST00000550442 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
LETMD1-223ENST00000550442 CABP4P57796 275 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
LETMD1-223ENST00000550442 ANKRD13DQ6ZTN6 518 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 NLGN1Q8N2Q7 840 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 NECTIN2Q92692 538 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 PIM2Q9P1W9 311 aa14.31□□□□□ -0.12
LETMD1-223ENST00000550442 TRIM6-TRIM34B2RNG4 842 aa14.3□□□□□ -0.12
LETMD1-223ENST00000550442 NBPF7P0C2Y1 421 aaPredicted RBP14.3□□□□□ -0.12
LETMD1-223ENST00000550442 CTCFP49711 727 aaPredicted RBP14.3□□□□□ -0.12
LETMD1-223ENST00000550442 OS9Q13438 667 aaPredicted RBP14.3□□□□□ -0.12
LETMD1-223ENST00000550442 DALRD3Q5D0E6 543 aaKnown RBP14.3□□□□□ -0.12
LETMD1-223ENST00000550442 KIAA1211Q6ZU35 1233 aa14.3□□□□□ -0.12
LETMD1-223ENST00000550442 ZC3H4Q9UPT8 1303 aaKnown RBP14.3□□□□□ -0.12
LETMD1-223ENST00000550442 KDM6AO15550 1401 aaPredicted RBP14.3□□□□□ -0.12
LETMD1-223ENST00000550442 MLLT1Q03111 559 aaPredicted RBP14.29□□□□□ -0.12
LETMD1-223ENST00000550442 PDIA6Q15084 440 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 NFATC2IPQ8NCF5 419 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 LINC00116Q8NCU8 138 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 PLBD2Q8NHP8 589 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 EVI5LQ96CN4 794 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 ATG3Q9NT62 314 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
LETMD1-223ENST00000550442 RAD50Q92878 1312 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 C4AP0C0L4 1744 aa14.29□□□□□ -0.12
LETMD1-223ENST00000550442 LOC102724428A0A0B4J2F2 783 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 KCNQ3O43525 872 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 IFIT2P09913 472 aaKnown RBP14.28□□□□□ -0.12
LETMD1-223ENST00000550442 SIK1P57059 783 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 RFX7Q2KHR2 1363 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 VSIG10Q8N0Z9 540 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 OTUD7AQ8TE49 926 aaPredicted RBP14.28□□□□□ -0.12
LETMD1-223ENST00000550442 COPRSQ9NQ92 184 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 PARP3Q9Y6F1 533 aa14.28□□□□□ -0.12
LETMD1-223ENST00000550442 APBB1O00213 710 aa14.27□□□□□ -0.13
LETMD1-223ENST00000550442 GCKRQ14397 625 aa14.27□□□□□ -0.13
LETMD1-223ENST00000550442 PI4K2BQ8TCG2 481 aa14.27□□□□□ -0.13
LETMD1-223ENST00000550442 ABHD8Q96I13 439 aa14.27□□□□□ -0.13
LETMD1-223ENST00000550442 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
LETMD1-223ENST00000550442 GLTPD2A6NH11 291 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 NEURL1BA8MQ27 555 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 CYP27B1O15528 508 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 SGSM2O43147 1006 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 TRAK2O60296 914 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 KCNA3P22001 575 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 HSPA4P34932 840 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 RABL6Q3YEC7 729 aaPredicted RBP14.26□□□□□ -0.13
LETMD1-223ENST00000550442 TRAPPC3LQ5T215 181 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 RILPL2Q969X0 211 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 TM6SF1Q9BZW5 370 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 SNRKQ9NRH2 765 aa14.26□□□□□ -0.13
LETMD1-223ENST00000550442 CUL4AQ13619 759 aa14.25□□□□□ -0.13
LETMD1-223ENST00000550442 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
LETMD1-223ENST00000550442 ZNF496Q96IT1 587 aaPredicted RBP14.25□□□□□ -0.13
LETMD1-223ENST00000550442 GPR108Q9NPR9 543 aa14.25□□□□□ -0.13
LETMD1-223ENST00000550442 RTCBQ9Y3I0 505 aaKnown RBP14.25□□□□□ -0.13
LETMD1-223ENST00000550442 ATP6V1AP38606 617 aa14.24□□□□□ -0.13
LETMD1-223ENST00000550442 TRIM28Q13263 835 aaKnown RBP14.24□□□□□ -0.13
LETMD1-223ENST00000550442 COPS6Q7L5N1 327 aa14.24□□□□□ -0.13
LETMD1-223ENST00000550442 PIGBQ92521 554 aa14.24□□□□□ -0.13
LETMD1-223ENST00000550442 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
LETMD1-223ENST00000550442 ANO2Q9NQ90 1003 aa14.24□□□□□ -0.13
LETMD1-223ENST00000550442 LRRFIP1Q32MZ4 808 aaKnown RBP14.23□□□□□ -0.13
LETMD1-223ENST00000550442 RNF20Q5VTR2 975 aa14.23□□□□□ -0.13
LETMD1-223ENST00000550442 LRP10Q7Z4F1 713 aa14.23□□□□□ -0.13
LETMD1-223ENST00000550442 CCDC191Q8NCU4 936 aa14.23□□□□□ -0.13
LETMD1-223ENST00000550442 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
LETMD1-223ENST00000550442 KCNB2Q92953 911 aa14.23□□□□□ -0.13
LETMD1-223ENST00000550442 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
LETMD1-223ENST00000550442 DIAPH3Q9NSV4 1193 aa14.23□□□□□ -0.13
LETMD1-223ENST00000550442 LAMB4A4D0S4 1761 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 CYP2E1P05181 493 aaPredicted RBP14.22□□□□□ -0.13
LETMD1-223ENST00000550442 IGKV5-2P06315 115 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 ZKSCAN1P17029 563 aaPredicted RBP14.22□□□□□ -0.13
LETMD1-223ENST00000550442 LMNB1P20700 586 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 MRE11P49959 708 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 NEK4P51957 841 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 LBX1P52954 281 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 ITPK1Q13572 414 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 CNTNAP1P78357 1384 aa14.22□□□□□ -0.13
LETMD1-223ENST00000550442 CCDC88AQ3V6T2 1871 aa14.21□□□□□ -0.13
LETMD1-223ENST00000550442 GOLGA6L3A6NEY3 463 aa14.21□□□□□ -0.13
LETMD1-223ENST00000550442 ADRA2BP18089 450 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms