RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SLC51AQ86UW1 340 aa12.97□□□□□ -0.33
TRAFD1-207ENST00000550051 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-207ENST00000550051 ABHD8Q96I13 439 aa12.97□□□□□ -0.33
TRAFD1-207ENST00000550051 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
TRAFD1-207ENST00000550051 THSD7BQ9C0I4 1608 aa12.96□□□□□ -0.33
TRAFD1-207ENST00000550051 HSP90AB3PQ58FF7 597 aa12.96□□□□□ -0.33
TRAFD1-207ENST00000550051 CYP4F22Q6NT55 531 aa12.96□□□□□ -0.33
TRAFD1-207ENST00000550051 HHIPL1Q96JK4 782 aa12.96□□□□□ -0.33
TRAFD1-207ENST00000550051 BEGAINQ9BUH8 593 aa12.96□□□□□ -0.33
TRAFD1-207ENST00000550051 TSPYL4Q9UJ04 414 aa12.96□□□□□ -0.33
TRAFD1-207ENST00000550051 ABCC4O15439 1325 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 CDHR2Q9BYE9 1310 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 MAPK8IP3Q9UPT6 1336 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 KIAA2012Q0VF49 1180 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 TNIP1Q15025 636 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 COPS6Q7L5N1 327 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 NLRP10Q86W26 655 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 MPNDQ8N594 471 aa12.95□□□□□ -0.34
TRAFD1-207ENST00000550051 GMPSP49915 693 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-207ENST00000550051 RIPK4P57078 832 aa12.94□□□□□ -0.34
TRAFD1-207ENST00000550051 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
TRAFD1-207ENST00000550051 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
TRAFD1-207ENST00000550051 CIAPIN1Q6FI81 312 aa12.94□□□□□ -0.34
TRAFD1-207ENST00000550051 TMC4Q7Z404 712 aa12.94□□□□□ -0.34
TRAFD1-207ENST00000550051 LAMB2P55268 1798 aa12.94□□□□□ -0.34
TRAFD1-207ENST00000550051 CA12O43570 354 aa12.93□□□□□ -0.34
TRAFD1-207ENST00000550051 HCLS1P14317 486 aaPredicted RBP12.93□□□□□ -0.34
TRAFD1-207ENST00000550051 RGS19P49795 217 aa12.93□□□□□ -0.34
TRAFD1-207ENST00000550051 HIRAP54198 1017 aaPredicted RBP12.93□□□□□ -0.34
TRAFD1-207ENST00000550051 DDX46Q7L014 1031 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-207ENST00000550051 SH3TC1Q8TE82 1336 aa12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 CELF2O95319 508 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 ANXA1P04083 346 aa12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 GRAPQ13588 217 aa12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 PAXIP1Q6ZW49 1069 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 CDC37L1Q7L3B6 337 aa12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 TRMT112Q9UI30 125 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 CNOT7Q9UIV1 285 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-207ENST00000550051 H7C1D1 291 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 CHL1O00533 1208 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 AOC2O75106 756 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 RAD17O75943 681 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 DSG3P32926 999 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 DPF2Q92785 391 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 BCL2L13Q9BXK5 485 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 GLIS2Q9BZE0 524 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 TAF1P21675 1872 aa12.91□□□□□ -0.34
TRAFD1-207ENST00000550051 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
TRAFD1-207ENST00000550051 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-207ENST00000550051 GRM1Q13255 1194 aa12.9□□□□□ -0.34
TRAFD1-207ENST00000550051 SF3B3Q15393 1217 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-207ENST00000550051 RALBP1Q15311 655 aa12.89□□□□□ -0.35
TRAFD1-207ENST00000550051 PLBD2Q8NHP8 589 aa12.89□□□□□ -0.35
TRAFD1-207ENST00000550051 POLR2AP24928 1970 aaKnown RBP12.89□□□□□ -0.35
TRAFD1-207ENST00000550051 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 TRIM28Q13263 835 aaKnown RBP12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 WASHC4Q2M389 1173 aa12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 ANKRD13DQ6ZTN6 518 aa12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 NECTIN2Q92692 538 aa12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
TRAFD1-207ENST00000550051 CASP8AP2Q9UKL3 1982 aa12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 HOXB7P09629 217 aa12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 MLLT1Q03111 559 aaPredicted RBP12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 NOGQ13253 232 aa12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 FAM161AQ3B820 660 aa12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 NSFL1CQ9UNZ2 370 aaKnown RBP12.87□□□□□ -0.35
TRAFD1-207ENST00000550051 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 DDX60Q8IY21 1712 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 SHTN1A0MZ66 631 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 CHPF2Q9P2E5 772 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 POLLQ9UGP5 575 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 ZBTB12Q9Y330 459 aaPredicted RBP12.86□□□□□ -0.35
TRAFD1-207ENST00000550051 PSMD14O00487 310 aa12.85□□□□□ -0.35
TRAFD1-207ENST00000550051 SLC34A2O95436 690 aa12.85□□□□□ -0.35
TRAFD1-207ENST00000550051 RPS8P62241 208 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-207ENST00000550051 SAMD7Q7Z3H4 446 aa12.85□□□□□ -0.35
TRAFD1-207ENST00000550051 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
TRAFD1-207ENST00000550051 HYPKQ9NX55 129 aa12.85□□□□□ -0.35
TRAFD1-207ENST00000550051 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
TRAFD1-207ENST00000550051 HUNKP57058 714 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms