RNA–Protein interactions for RNA: ENST00000549840.1

ATP2A2-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 5

Gene ATP2A2, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-208ENST00000549840 GTF3C3Q9Y5Q9 886 aa10.11□□□□□ -0.79
ATP2A2-208ENST00000549840 C10orf71Q711Q0 1435 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 KLRG2A4D1S0 409 aaPredicted RBP10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 HMMRO75330 724 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 PDE6BP35913 854 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 HDAC1Q13547 482 aaPredicted RBP10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 POLA2Q14181 598 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 CRY2Q49AN0 593 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 CCDC152Q4G0S7 254 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 SSH3Q8TE77 659 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 GREM2Q9H772 168 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 PPP4R2Q9NY27 417 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 LAMB2P55268 1798 aa10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 DDX60Q8IY21 1712 aaKnown RBP10.1□□□□□ -0.79
ATP2A2-208ENST00000549840 TNRC6CQ9HCJ0 1690 aaKnown RBP10.09□□□□□ -0.79
ATP2A2-208ENST00000549840 ITGA6P23229 1130 aa10.09□□□□□ -0.79
ATP2A2-208ENST00000549840 RFX5P48382 616 aaPredicted RBP10.09□□□□□ -0.79
ATP2A2-208ENST00000549840 IFIT5Q13325 482 aaKnown RBP10.09□□□□□ -0.79
ATP2A2-208ENST00000549840 CCDC57Q2TAC2 916 aa10.09□□□□□ -0.79
ATP2A2-208ENST00000549840 RWDD1Q9H446 243 aaPredicted RBP10.09□□□□□ -0.79
ATP2A2-208ENST00000549840 RTL9Q8NET4 1388 aa10.09□□□□□ -0.79
ATP2A2-208ENST00000549840 ANKRD18BA2A2Z9 1011 aa10.08□□□□□ -0.8
ATP2A2-208ENST00000549840 IGHDP01880 384 aa10.08□□□□□ -0.8
ATP2A2-208ENST00000549840 RPGRQ92834 1020 aaKnown RBP10.08□□□□□ -0.8
ATP2A2-208ENST00000549840 CCDC136Q96JN2 1154 aa10.08□□□□□ -0.8
ATP2A2-208ENST00000549840 SEC31BQ9NQW1 1179 aa10.08□□□□□ -0.8
ATP2A2-208ENST00000549840 H0YIN7 160 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 SRGNP10124 158 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 HOXA10P31260 410 aaPredicted RBP10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 PTPN12Q05209 780 aaKnown RBP10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 TAF7LQ5H9L4 462 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 DDX46Q7L014 1031 aaKnown RBP10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 C2CD5Q86YS7 1000 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 KLHDC4Q8TBB5 520 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 ZNF594Q96JF6 807 aaPredicted RBP10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 DCTPP1Q9H773 170 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 COPRSQ9NQ92 184 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 PA2G4Q9UQ80 394 aaKnown RBP10.07□□□□□ -0.8
ATP2A2-208ENST00000549840 ANKRD31Q8N7Z5 1873 aa10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 SURF6O75683 361 aaKnown RBP10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 NPR1P16066 1061 aa10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 CHRNA5P30532 468 aa10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 CELF1Q92879 486 aaKnown RBP10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 MASTLQ96GX5 879 aa10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 RBM17Q96I25 401 aaKnown RBP10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 CRAMP1Q96RY5 1269 aa10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 CDC5LQ99459 802 aaKnown RBP10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 CD2APQ9Y5K6 639 aa10.06□□□□□ -0.8
ATP2A2-208ENST00000549840 IGHMBP2P38935 993 aaKnown RBP10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 TGFB2P61812 414 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 RPS8P62241 208 aaKnown RBP10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 GRAPQ13588 217 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 STYK1Q6J9G0 422 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 LDHAL6AQ6ZMR3 332 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 ANKRD18AQ8IVF6 992 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 SIL1Q9H173 461 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 MYH3P11055 1940 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 KDM2BQ8NHM5 1336 aa10.05□□□□□ -0.8
ATP2A2-208ENST00000549840 COL4A1P02462 1669 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 A0A0G2JLW4 131 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 EYA2O00167 538 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 CIAO1O76071 339 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 DPEP1P16444 411 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 ALDH1B1P30837 517 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 G3BP1Q13283 466 aaKnown RBP eCLIP10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 OS9Q13438 667 aaPredicted RBP10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 HSP90AB4PQ58FF6 505 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 CENPQQ7L2Z9 268 aaPredicted RBP10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 SMC5Q8IY18 1101 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 ZNF622Q969S3 477 aaKnown RBP eCLIP10.04□□□□□ -0.84e-15■□□□□ 9.9
ATP2A2-208ENST00000549840 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 MPHOSPH8Q99549 860 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 PUS3Q9BZE2 481 aaKnown RBP10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 FBXO3Q9UK99 471 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 LRP5O75197 1615 aa10.04□□□□□ -0.8
ATP2A2-208ENST00000549840 APBB1O00213 710 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 RAB11FIP3O75154 756 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 BBOX1O75936 387 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 COL11A2P13942 1736 aaPredicted RBP10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 KCNA3P22001 575 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 IL15P40933 162 aaPredicted RBP10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 LRRC24Q50LG9 513 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 ATG9AQ7Z3C6 839 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 CNKSR1Q969H4 720 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 CNNM1Q9NRU3 951 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 BSDC1Q9NW68 430 aaPredicted RBP10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 RIPOR2Q9Y4F9 1068 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 KIF13BQ9NQT8 1826 aa10.03□□□□□ -0.8
ATP2A2-208ENST00000549840 PPEF1O14829 653 aaPredicted RBP10.02□□□□□ -0.81
ATP2A2-208ENST00000549840 SASH1O94885 1247 aa10.02□□□□□ -0.81
ATP2A2-208ENST00000549840 PRPF40BQ6NWY9 871 aaKnown RBP10.02□□□□□ -0.81
ATP2A2-208ENST00000549840 TMC4Q7Z404 712 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms