RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 PDE4BQ07343 736 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
VDR-206ENST00000549336 GGA1Q9UJY5 639 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 KDRP35968 1356 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 NEURL1BA8MQ27 555 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 NAA16Q6N069 864 aaPredicted RBP13.81□□□□□ -0.2
VDR-206ENST00000549336 WASF1Q92558 559 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 PCCAP05165 728 aaPredicted RBP13.81□□□□□ -0.2
VDR-206ENST00000549336 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
VDR-206ENST00000549336 PDRG1Q9NUG6 133 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 DENND2AQ9ULE3 1009 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 PCDHB15Q9Y5E8 787 aa13.81□□□□□ -0.2
VDR-206ENST00000549336 BACH2Q9BYV9 841 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 MPHOSPH10O00566 681 aaKnown RBP13.8□□□□□ -0.2
VDR-206ENST00000549336 TTC22Q5TAA0 569 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 BARGINQ6ZT62 677 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 ZBTB38Q8NAP3 1195 aaPredicted RBP13.8□□□□□ -0.2
VDR-206ENST00000549336 NUP133Q8WUM0 1156 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 MST1RQ04912 1400 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 PDE1AP54750 535 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 CNKSR1Q969H4 720 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 PA2G4Q9UQ80 394 aaKnown RBP13.8□□□□□ -0.2
VDR-206ENST00000549336 MROH2AA6NES4 1674 aa13.8□□□□□ -0.2
VDR-206ENST00000549336 RLBP1P12271 317 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 ZBTB1Q9Y2K1 713 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 HMG20BQ9P0W2 317 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 MROH5Q6ZUA9 1318 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 ADRA2BP18089 450 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 CYP7A1P22680 504 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 TTLL12Q14166 644 aaPredicted RBP13.79□□□□□ -0.2
VDR-206ENST00000549336 CERS3Q8IU89 383 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 UFL1O94874 794 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
VDR-206ENST00000549336 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
VDR-206ENST00000549336 DPP8Q6V1X1 898 aaPredicted RBP13.79□□□□□ -0.2
VDR-206ENST00000549336 PPLO60437 1756 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 GNAT2P19087 354 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 TMC4Q7Z404 712 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 USPL1Q5W0Q7 1092 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 DRC7Q8IY82 874 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 MAST3O60307 1309 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 CPDO75976 1380 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 SPATA31A1Q5TZJ5 1347 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 TTLL7Q6ZT98 887 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
VDR-206ENST00000549336 HIBADHP31937 336 aaKnown RBP13.78□□□□□ -0.2
VDR-206ENST00000549336 FAM182BQ5T319 152 aa13.78□□□□□ -0.2
VDR-206ENST00000549336 TFCP2Q12800 502 aa13.77□□□□□ -0.2
VDR-206ENST00000549336 CLEC4GQ6UXB4 293 aa13.77□□□□□ -0.2
VDR-206ENST00000549336 SMC5Q8IY18 1101 aa13.77□□□□□ -0.2
VDR-206ENST00000549336 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.2
VDR-206ENST00000549336 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.2
VDR-206ENST00000549336 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
VDR-206ENST00000549336 RPS6KA4O75676 772 aa13.77□□□□□ -0.21
VDR-206ENST00000549336 LDHBP07195 334 aaKnown RBP13.77□□□□□ -0.21
VDR-206ENST00000549336 NF2P35240 595 aa13.77□□□□□ -0.21
VDR-206ENST00000549336 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
VDR-206ENST00000549336 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
VDR-206ENST00000549336 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.21
VDR-206ENST00000549336 BICD2Q8TD16 824 aa13.77□□□□□ -0.21
VDR-206ENST00000549336 PAG1Q9NWQ8 432 aa13.77□□□□□ -0.21
VDR-206ENST00000549336 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
VDR-206ENST00000549336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
VDR-206ENST00000549336 LPIN2Q92539 896 aa13.77□□□□□ -0.21
VDR-206ENST00000549336 CTSWP56202 376 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 SLC9C2Q5TAH2 1124 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 JMYQ8N9B5 988 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 IGHDP01880 384 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 WDR66Q8TBY9 1149 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 ZNF396Q96N95 335 aaPredicted RBP13.76□□□□□ -0.21
VDR-206ENST00000549336 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 SUCLG2Q96I99 432 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 SLC4A3P48751 1232 aa13.76□□□□□ -0.21
VDR-206ENST00000549336 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 IQSEC3Q9UPP2 1182 aaPredicted RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 ABCC4O15439 1325 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 A0A1B0GUL7 405 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 TPD52L1Q16890 204 aaPredicted RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 MFSD6Q6ZSS7 791 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 MPNDQ8N594 471 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 NOL7Q9UMY1 257 aaKnown RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 KIF13AQ9H1H9 1805 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 TXLNAP40222 546 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 TNNI2P48788 182 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 FOXD4L6Q3SYB3 417 aaPredicted RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 MCMDC2Q4G0Z9 681 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 FOXD4L3Q6VB84 417 aaPredicted RBP13.75□□□□□ -0.21
VDR-206ENST00000549336 LARGE2Q8N3Y3 721 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 TBC1D22AQ8WUA7 517 aa13.75□□□□□ -0.21
VDR-206ENST00000549336 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms