RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
DDX54-206ENST00000549271 CSRNP1Q96S65 589 aa16.19■□□□□ 0.18
DDX54-206ENST00000549271 GBA2Q9HCG7 927 aaPredicted RBP16.19■□□□□ 0.18
DDX54-206ENST00000549271 SLC10A3P09131 477 aa16.18■□□□□ 0.18
DDX54-206ENST00000549271 ZNF157P51786 506 aaPredicted RBP16.18■□□□□ 0.18
DDX54-206ENST00000549271 C2orf69Q8N8R5 385 aa16.18■□□□□ 0.18
DDX54-206ENST00000549271 TMX4Q9H1E5 349 aaPredicted RBP16.18■□□□□ 0.18
DDX54-206ENST00000549271 MKI67P46013 3256 aaKnown RBP16.18■□□□□ 0.18
DDX54-206ENST00000549271 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
DDX54-206ENST00000549271 YDJCA8MPS7 323 aa16.17■□□□□ 0.18
DDX54-206ENST00000549271 H7C1D1 291 aa16.17■□□□□ 0.18
DDX54-206ENST00000549271 U2AF1L5P0DN76 240 aaPredicted RBP16.17■□□□□ 0.18
DDX54-206ENST00000549271 GPTP24298 496 aa16.17■□□□□ 0.18
DDX54-206ENST00000549271 U2AF1Q01081 240 aaKnown RBP eCLIP16.17■□□□□ 0.18
DDX54-206ENST00000549271 MICALL2Q8IY33 904 aa16.17■□□□□ 0.18
DDX54-206ENST00000549271 ZNF34Q8IZ26 560 aa16.17■□□□□ 0.18
DDX54-206ENST00000549271 RTF1Q92541 710 aaKnown RBP16.17■□□□□ 0.18
DDX54-206ENST00000549271 PKN2Q16513 984 aaKnown RBP16.16■□□□□ 0.18
DDX54-206ENST00000549271 DPP8Q6V1X1 898 aaPredicted RBP16.16■□□□□ 0.18
DDX54-206ENST00000549271 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
DDX54-206ENST00000549271 MCM10Q7L590 875 aa16.16■□□□□ 0.18
DDX54-206ENST00000549271 KRT26Q7Z3Y9 468 aa16.16■□□□□ 0.18
DDX54-206ENST00000549271 DUOX1Q9NRD9 1551 aa16.16■□□□□ 0.18
DDX54-206ENST00000549271 ABCC4O15439 1325 aa16.16■□□□□ 0.18
DDX54-206ENST00000549271 SAMD7Q7Z3H4 446 aa16.15■□□□□ 0.18
DDX54-206ENST00000549271 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
DDX54-206ENST00000549271 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
DDX54-206ENST00000549271 DPF2Q92785 391 aa16.15■□□□□ 0.18
DDX54-206ENST00000549271 NLRP3Q96P20 1036 aa16.15■□□□□ 0.18
DDX54-206ENST00000549271 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
DDX54-206ENST00000549271 LRRC37AA6NMS7 1700 aa16.14■□□□□ 0.17
DDX54-206ENST00000549271 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
DDX54-206ENST00000549271 EGFRP00533 1210 aa16.14■□□□□ 0.17
DDX54-206ENST00000549271 HABP4Q5JVS0 413 aaKnown RBP16.14■□□□□ 0.17
DDX54-206ENST00000549271 SLC10A5Q5PT55 438 aa16.14■□□□□ 0.17
DDX54-206ENST00000549271 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.17
DDX54-206ENST00000549271 MPNDQ8N594 471 aa16.14■□□□□ 0.17
DDX54-206ENST00000549271 ZBTB12Q9Y330 459 aaPredicted RBP16.14■□□□□ 0.17
DDX54-206ENST00000549271 TAF1P21675 1872 aa16.14■□□□□ 0.17
DDX54-206ENST00000549271 BBOX1O75936 387 aa16.13■□□□□ 0.17
DDX54-206ENST00000549271 KIF6Q6ZMV9 814 aa16.13■□□□□ 0.17
DDX54-206ENST00000549271 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
DDX54-206ENST00000549271 HTTP42858 3142 aa16.12■□□□□ 0.17
DDX54-206ENST00000549271 DCTN1Q14203 1278 aa16.12■□□□□ 0.17
DDX54-206ENST00000549271 TAF7Q15545 349 aaPredicted RBP16.12■□□□□ 0.17
DDX54-206ENST00000549271 TBC1D10BQ4KMP7 808 aaPredicted RBP16.12■□□□□ 0.17
DDX54-206ENST00000549271 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
DDX54-206ENST00000549271 PPP1R42Q7Z4L9 355 aa16.12■□□□□ 0.17
DDX54-206ENST00000549271 PARP10Q53GL7 1025 aa16.11■□□□□ 0.17
DDX54-206ENST00000549271 RASAL3Q86YV0 1011 aa16.11■□□□□ 0.17
DDX54-206ENST00000549271 DCPSQ96C86 337 aaKnown RBP16.11■□□□□ 0.17
DDX54-206ENST00000549271 PSMD14O00487 310 aa16.1■□□□□ 0.17
DDX54-206ENST00000549271 ZNF296Q8WUU4 475 aaPredicted RBP16.1■□□□□ 0.17
DDX54-206ENST00000549271 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
DDX54-206ENST00000549271 RRP7AQ9Y3A4 280 aaKnown RBP16.1■□□□□ 0.17
DDX54-206ENST00000549271 DDX60Q8IY21 1712 aaKnown RBP16.1■□□□□ 0.17
DDX54-206ENST00000549271 MYL6BP14649 208 aa16.09■□□□□ 0.17
DDX54-206ENST00000549271 HDAC9Q9UKV0 1011 aa16.09■□□□□ 0.17
DDX54-206ENST00000549271 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.17
DDX54-206ENST00000549271 RPS12P25398 132 aaKnown RBP16.08■□□□□ 0.16
DDX54-206ENST00000549271 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
DDX54-206ENST00000549271 NOM1Q5C9Z4 860 aaKnown RBP16.08■□□□□ 0.16
DDX54-206ENST00000549271 FBXO46Q6PJ61 603 aaPredicted RBP16.08■□□□□ 0.16
DDX54-206ENST00000549271 PNISRQ8TF01 805 aaKnown RBP16.08■□□□□ 0.16
DDX54-206ENST00000549271 CDCA5Q96FF9 252 aa16.08■□□□□ 0.16
DDX54-206ENST00000549271 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
DDX54-206ENST00000549271 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
DDX54-206ENST00000549271 SCN9AQ15858 1988 aa16.07■□□□□ 0.16
DDX54-206ENST00000549271 CENPFP49454 3210 aa16.07■□□□□ 0.16
DDX54-206ENST00000549271 GRAPQ13588 217 aa16.07■□□□□ 0.16
DDX54-206ENST00000549271 GRAPLQ8TC17 118 aaPredicted RBP16.07■□□□□ 0.16
DDX54-206ENST00000549271 PLEKHF1Q96S99 279 aa16.07■□□□□ 0.16
DDX54-206ENST00000549271 RBBP6Q7Z6E9 1792 aaKnown RBP16.06■□□□□ 0.16
DDX54-206ENST00000549271 RTL9Q8NET4 1388 aa16.06■□□□□ 0.16
DDX54-206ENST00000549271 TBC1D8O95759 1140 aa16.06■□□□□ 0.16
DDX54-206ENST00000549271 NEFMP07197 916 aa16.06■□□□□ 0.16
DDX54-206ENST00000549271 KIF4BQ2VIQ3 1234 aa16.06■□□□□ 0.16
DDX54-206ENST00000549271 RBM26Q5T8P6 1007 aaKnown RBP16.06■□□□□ 0.16
DDX54-206ENST00000549271 SULF1Q8IWU6 871 aa16.06■□□□□ 0.16
DDX54-206ENST00000549271 GGA3Q9NZ52 723 aa16.06■□□□□ 0.16
DDX54-206ENST00000549271 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
DDX54-206ENST00000549271 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
DDX54-206ENST00000549271 FXR1P51114 621 aaKnown RBP eCLIP16.05■□□□□ 0.16
DDX54-206ENST00000549271 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
DDX54-206ENST00000549271 FKBP1BP68106 108 aa16.05■□□□□ 0.16
DDX54-206ENST00000549271 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
DDX54-206ENST00000549271 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
DDX54-206ENST00000549271 TMC4Q7Z404 712 aa16.05■□□□□ 0.16
DDX54-206ENST00000549271 LRP10Q7Z4F1 713 aa16.05■□□□□ 0.16
DDX54-206ENST00000549271 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
DDX54-206ENST00000549271 GPR25O00155 361 aa16.04■□□□□ 0.16
DDX54-206ENST00000549271 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
DDX54-206ENST00000549271 PNNQ9H307 717 aaKnown RBP16.04■□□□□ 0.16
DDX54-206ENST00000549271 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
DDX54-206ENST00000549271 HCLS1P14317 486 aaPredicted RBP16.03■□□□□ 0.16
DDX54-206ENST00000549271 TM4SF4P48230 202 aa16.03■□□□□ 0.16
DDX54-206ENST00000549271 PSME4Q14997 1843 aa16.03■□□□□ 0.16
DDX54-206ENST00000549271 BRCA2P51587 3418 aa16.03■□□□□ 0.16
DDX54-206ENST00000549271 ECE2O60344 883 aa16.02■□□□□ 0.16
DDX54-206ENST00000549271 ZNF609O15014 1411 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms