RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 CRAMP1Q96RY5 1269 aa12.13□□□□□ -0.47
RAB5B-205ENST00000549034 KIAA1551Q9HCM1 1747 aa12.13□□□□□ -0.47
RAB5B-205ENST00000549034 CDHR2Q9BYE9 1310 aa12.12□□□□□ -0.47
RAB5B-205ENST00000549034 GRM8O00222 908 aa12.12□□□□□ -0.47
RAB5B-205ENST00000549034 HOXA10P31260 410 aaPredicted RBP12.12□□□□□ -0.47
RAB5B-205ENST00000549034 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
RAB5B-205ENST00000549034 TNNQ9UQP3 1299 aa12.12□□□□□ -0.47
RAB5B-205ENST00000549034 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
RAB5B-205ENST00000549034 CACNA1SQ13698 1873 aa12.11□□□□□ -0.47
RAB5B-205ENST00000549034 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
RAB5B-205ENST00000549034 TRIM27P14373 513 aa12.11□□□□□ -0.47
RAB5B-205ENST00000549034 CASP7P55210 303 aa12.11□□□□□ -0.47
RAB5B-205ENST00000549034 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
RAB5B-205ENST00000549034 TMX4Q9H1E5 349 aaPredicted RBP12.11□□□□□ -0.47
RAB5B-205ENST00000549034 SRCAPQ6ZRS2 3230 aa12.11□□□□□ -0.47
RAB5B-205ENST00000549034 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
RAB5B-205ENST00000549034 BBOX1O75936 387 aa12.1□□□□□ -0.47
RAB5B-205ENST00000549034 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
RAB5B-205ENST00000549034 TTLL11Q8NHH1 800 aa12.1□□□□□ -0.47
RAB5B-205ENST00000549034 USP44Q9H0E7 712 aa12.1□□□□□ -0.47
RAB5B-205ENST00000549034 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
RAB5B-205ENST00000549034 TAF1P21675 1872 aa12.1□□□□□ -0.47
RAB5B-205ENST00000549034 RIC1Q4ADV7 1423 aa12.1□□□□□ -0.47
RAB5B-205ENST00000549034 TNRC6CQ9HCJ0 1690 aaKnown RBP12.1□□□□□ -0.47
RAB5B-205ENST00000549034 DDX60Q8IY21 1712 aaKnown RBP12.09□□□□□ -0.47
RAB5B-205ENST00000549034 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
RAB5B-205ENST00000549034 PLIN1O60240 522 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 CTSWP56202 376 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
RAB5B-205ENST00000549034 FOXO4P98177 505 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 GRAPQ13588 217 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 INTS3Q68E01 1043 aaKnown RBP12.09□□□□□ -0.47
RAB5B-205ENST00000549034 OLFM4Q6UX06 510 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 FTSJ3Q8IY81 847 aaKnown RBP12.09□□□□□ -0.47
RAB5B-205ENST00000549034 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
RAB5B-205ENST00000549034 GRAPLQ8TC17 118 aaPredicted RBP12.09□□□□□ -0.47
RAB5B-205ENST00000549034 PLA2G12BQ9BX93 195 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 CHMP3Q9Y3E7 222 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 LAMB2P55268 1798 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 DLEC1Q9Y238 1755 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 ABCC4O15439 1325 aa12.09□□□□□ -0.47
RAB5B-205ENST00000549034 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.47
RAB5B-205ENST00000549034 CSF1RP07333 972 aa12.08□□□□□ -0.48
RAB5B-205ENST00000549034 SOGA3Q5TF21 947 aa12.08□□□□□ -0.48
RAB5B-205ENST00000549034 LMBR1LQ6UX01 489 aa12.08□□□□□ -0.48
RAB5B-205ENST00000549034 SP8Q8IXZ3 490 aa12.08□□□□□ -0.48
RAB5B-205ENST00000549034 TMEM57Q8N5G2 664 aa12.08□□□□□ -0.48
RAB5B-205ENST00000549034 C7orf43Q8WVR3 580 aa12.08□□□□□ -0.48
RAB5B-205ENST00000549034 CELF1Q92879 486 aaKnown RBP12.08□□□□□ -0.48
RAB5B-205ENST00000549034 SUCLG2Q96I99 432 aa12.08□□□□□ -0.48
RAB5B-205ENST00000549034 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 MS4A1P11836 297 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.07□□□□□ -0.48
RAB5B-205ENST00000549034 GREM2Q9H772 168 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 HDAC5Q9UQL6 1122 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 UTYO14607 1347 aa12.07□□□□□ -0.48
RAB5B-205ENST00000549034 MYH3P11055 1940 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 ANKRD18BA2A2Z9 1011 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 UBTFL1P0CB47 393 aaPredicted RBP12.06□□□□□ -0.48
RAB5B-205ENST00000549034 ITGA6P23229 1130 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 IFIT5Q13325 482 aaKnown RBP12.06□□□□□ -0.48
RAB5B-205ENST00000549034 CCDC93Q567U6 631 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 KAZALD1Q96I82 304 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
RAB5B-205ENST00000549034 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
RAB5B-205ENST00000549034 GNAI3P08754 354 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 RLBP1P12271 317 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 IGHMBP2P38935 993 aaKnown RBP12.05□□□□□ -0.48
RAB5B-205ENST00000549034 RASSF7Q02833 373 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 CCDC57Q2TAC2 916 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 TMC4Q7Z404 712 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 ITPRIPQ8IWB1 547 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 MPNDQ8N594 471 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 MEIS3Q99687 375 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 BICC1Q9H694 974 aaKnown RBP12.05□□□□□ -0.48
RAB5B-205ENST00000549034 CCDC88AQ3V6T2 1871 aa12.05□□□□□ -0.48
RAB5B-205ENST00000549034 CHD4Q14839 1912 aa12.04□□□□□ -0.48
RAB5B-205ENST00000549034 FAM161AQ3B820 660 aa12.04□□□□□ -0.48
RAB5B-205ENST00000549034 GRIPAP1Q4V328 841 aa12.04□□□□□ -0.48
RAB5B-205ENST00000549034 TAF7LQ5H9L4 462 aa12.04□□□□□ -0.48
RAB5B-205ENST00000549034 SLC51AQ86UW1 340 aa12.04□□□□□ -0.48
RAB5B-205ENST00000549034 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
RAB5B-205ENST00000549034 TAOK3Q9H2K8 898 aa12.04□□□□□ -0.48
RAB5B-205ENST00000549034 NSFL1CQ9UNZ2 370 aaKnown RBP12.04□□□□□ -0.48
RAB5B-205ENST00000549034 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
RAB5B-205ENST00000549034 NFKBIEO00221 500 aa12.03□□□□□ -0.48
RAB5B-205ENST00000549034 FKBP4Q02790 459 aaKnown RBP eCLIP12.03□□□□□ -0.48
RAB5B-205ENST00000549034 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
RAB5B-205ENST00000549034 DPP8Q6V1X1 898 aaPredicted RBP12.03□□□□□ -0.48
RAB5B-205ENST00000549034 ZNF594Q96JF6 807 aaPredicted RBP12.03□□□□□ -0.48
RAB5B-205ENST00000549034 BSDC1Q9NW68 430 aaPredicted RBP12.03□□□□□ -0.48
RAB5B-205ENST00000549034 RNF181Q9P0P0 153 aa12.03□□□□□ -0.48
RAB5B-205ENST00000549034 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
RAB5B-205ENST00000549034 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.49
RAB5B-205ENST00000549034 LMNB1P20700 586 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms