RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 BOLA2Q9H3K6 86 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 DDX21Q9NR30 783 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 SIPA1L3O60292 1781 aaPredicted RBP11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 PXDNQ92626 1479 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 PTGS1P23219 599 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 TLR7Q9NYK1 1049 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 RFX7Q2KHR2 1363 aa11.69□□□□□ -0.54
SMARCD1-205ENST00000548573 TAF5LO75529 589 aa11.68□□□□□ -0.54
SMARCD1-205ENST00000548573 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
SMARCD1-205ENST00000548573 ANKRD7Q92527 254 aa11.68□□□□□ -0.54
SMARCD1-205ENST00000548573 LRRC59Q96AG4 307 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-205ENST00000548573 CHMP3Q9Y3E7 222 aa11.68□□□□□ -0.54
SMARCD1-205ENST00000548573 ADAMTS7Q9UKP4 1686 aa11.68□□□□□ -0.54
SMARCD1-205ENST00000548573 ZNF75DP51815 510 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 UTP14CQ5TAP6 766 aaKnown RBP11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 CCDC186Q7Z3E2 898 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 ZNF589Q86UQ0 364 aaPredicted RBP11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 CKAP2LQ8IYA6 745 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 GTF3C6Q969F1 213 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 ARID3AQ99856 593 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 ZSCAN16Q9H4T2 348 aaPredicted RBP11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 ATP5JP18859 108 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 RESTQ13127 1097 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 SYCP1Q15431 976 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 PGBD1Q96JS3 809 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 TCEANC2Q96MN5 208 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 NEK1Q96PY6 1258 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 TAF6LQ9Y6J9 622 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 CAMTA1Q9Y6Y1 1673 aa11.67□□□□□ -0.54
SMARCD1-205ENST00000548573 PRAMEF22A3QJZ6 481 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 NR1I2O75469 434 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 IGKV5-2P06315 115 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 CDC25BP30305 580 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 ZNF165P49910 485 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 PDCL2Q8N4E4 241 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 BICD2Q8TD16 824 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 TRIM5Q9C035 493 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 CFAP45Q9UL16 551 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 PDIA6Q15084 440 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 ZSCAN25Q6NSZ9 544 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 DRC7Q8IY82 874 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 SIL1Q9H173 461 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 COPRSQ9NQ92 184 aa11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 U3KPZ7 1027 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-205ENST00000548573 NEURL1BA8MQ27 555 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 ZSCAN20P17040 1043 aaPredicted RBP11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 PSME1Q06323 249 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 DMTNQ08495 405 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 NEXNQ0ZGT2 675 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 STK3Q13188 491 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 SARM1Q6SZW1 724 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 RIC3Q7Z5B4 369 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 ARHGEF25Q86VW2 580 aa11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 LLPHQ9BRT6 129 aaKnown RBP11.65□□□□□ -0.54
SMARCD1-205ENST00000548573 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.55
SMARCD1-205ENST00000548573 SLIT3O75094 1523 aa11.65□□□□□ -0.55
SMARCD1-205ENST00000548573 SMTNL1A8MU46 457 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 CTAGE5O15320 804 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 GCKRQ14397 625 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 SMARCC2Q8TAQ2 1214 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 BRF1Q92994 677 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 COL15A1P39059 1388 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 FAM177BA6PVY3 158 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 H3BQV1 296 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 JAK2O60674 1132 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 AIMP1Q12904 312 aaKnown RBP11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 LRMPQ12912 555 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 Q6ZUG5 572 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
SMARCD1-205ENST00000548573 HMGB1P09429 215 aaKnown RBP11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 TNNI3KQ59H18 835 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 METTL22Q9BUU2 404 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 GTPBP4Q9BZE4 634 aaKnown RBP11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 CLIP2Q9UDT6 1046 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 NRBP1Q9UHY1 535 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 FPGT-TNNI3KV9GXZ4 949 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 NEMFO60524 1076 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 GCP02774 474 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 IQCB1Q15051 598 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 ATP2B3Q16720 1220 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 ATL3Q6DD88 541 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 ANKRD24Q8TF21 1146 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 MRFAP1L1Q96HT8 127 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 FEZ1Q99689 392 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
SMARCD1-205ENST00000548573 GOLGA6L19H0YKK7 550 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 PFKFB2O60825 505 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 CYP21A2P08686 494 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 TNNT1P13805 278 aa11.62□□□□□ -0.55
SMARCD1-205ENST00000548573 HSP90B1P14625 803 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms